DK955773 |
Clone id |
TST39A01NGRL0023_P23 |
Library |
TST39 |
Length |
509 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0023_P23. 5' end sequence. |
Accession |
DK955773 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1668Contig1 |
Sequence |
GATCCAGCAAGAAGAGCCTCCTCTTAAGCGTCTAATTGTAACCGGAACAGCTTCGATCCC TCTCTTTCTCTGCAGATCATGACCATCATGCACGTACTTTCCCCTCAGGGCGCAAAAGCT TCTTAAACAGTGCTTCCCACCCTTCAGCACAGCGTGCCTCCATCGACTACCGCTCCAGAA TGGTTGTCTTAGCTGCCTCCATCATTACCAAAACGGGCAAAGCCCTGGTATCACGTCAAT TCGTGGAAATGACAAGGATAAGGATCGAGGGTCTCTTAGCTGCTTTCCCAAAGCTTGTGG GGACTGGCAAACAGCATACTTATGTTGAAACAGAGAATGTTCGATATGTTTATCAACCTA TTGAGCTGCTATACCTTCTGTTGGTCACAAACAGGCAAAGCAACATTTTAGAAGATTTGG AAATGTTGAGACTTTTATCAAAAATTGTTCCTGAATACTGCCCTAGTCTAGACGAAGATG GCATTTGCAAGGTGGCATTTGAACTGATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0DJ99 |
Definition |
sp|Q0DJ99|COPD2_ORYSJ Coatomer subunit delta-2 OS=Oryza sativa subsp. japonica |
Align length |
110 |
Score (bit) |
192.0 |
E-value |
8.0e-49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3B2G5 |
Definition |
tr|A3B2G5|A3B2G5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica |
Align length |
121 |
Score (bit) |
194.0 |
E-value |
3.0e-48 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955773|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0023_P23, 5' (509 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A3B2G5|A3B2G5_ORYSJ Putative uncharacterized protein OS=Oryza... 194 3e-48 tr|Q9M640|Q9M640_MAIZE Delta-COP OS=Zea mays PE=2 SV=1 193 5e-48 tr|B8AWD9|B8AWD9_ORYSI Putative uncharacterized protein OS=Oryza... 191 1e-47 tr|B6TDR8|B6TDR8_MAIZE Coatomer subunit delta OS=Zea mays PE=2 SV=1 191 1e-47 tr|B4G0V4|B4G0V4_MAIZE Putative uncharacterized protein OS=Zea m... 191 1e-47 tr|B7EGT8|B7EGT8_ORYSJ cDNA clone:J023027K10, full insert sequen... 190 4e-47 tr|A5B542|A5B542_VITVI Putative uncharacterized protein OS=Vitis... 189 9e-47 tr|B8LLU4|B8LLU4_PICSI Putative uncharacterized protein OS=Picea... 188 1e-46 tr|A7P2Q5|A7P2Q5_VITVI Chromosome chr1 scaffold_5, whole genome ... 187 3e-46 tr|A9RMY5|A9RMY5_PHYPA Predicted protein OS=Physcomitrella paten... 182 8e-45 tr|A9RGU9|A9RGU9_PHYPA Predicted protein OS=Physcomitrella paten... 181 2e-44 tr|A8I901|A8I901_CHLRE Delta-cop OS=Chlamydomonas reinhardtii GN... 174 2e-42 tr|Q94IK3|Q94IK3_SCHDU Coatomer delta subunit OS=Scherffelia dub... 167 3e-40 tr|Q91W48|Q91W48_MOUSE Archain 1 OS=Mus musculus GN=Arcn1 PE=2 SV=1 159 7e-38 tr|Q8C0G7|Q8C0G7_MOUSE Putative uncharacterized protein OS=Mus m... 159 7e-38 tr|Q6P1Q5|Q6P1Q5_HUMAN ARCN1 protein OS=Homo sapiens GN=ARCN1 PE... 159 7e-38 tr|B0YIW5|B0YIW5_HUMAN Coatomer subunit delta variant 1 (Archain... 159 7e-38 tr|Q7ZW27|Q7ZW27_DANRE Archain 1 OS=Danio rerio GN=arcn1 PE=2 SV=1 159 1e-37 tr|Q7T0U9|Q7T0U9_XENLA Arcn1 protein OS=Xenopus laevis GN=arcn1 ... 157 2e-37 tr|Q28E96|Q28E96_XENTR Archain 1 (Archain) OS=Xenopus tropicalis... 157 2e-37 tr|B6L4A9|B6L4A9_BRAFL Putative uncharacterized protein OS=Branc... 157 3e-37 tr|B0YIW6|B0YIW6_HUMAN Coatomer subunit delta variant 2 (Archain... 157 3e-37 tr|Q7ZU89|Q7ZU89_DANRE Archain 1 like OS=Danio rerio GN=arcn1l P... 156 5e-37 tr|B5X2H8|B5X2H8_SALSA Coatomer subunit delta OS=Salmo salar GN=... 156 5e-37 tr|Q3U4S9|Q3U4S9_MOUSE Putative uncharacterized protein OS=Mus m... 156 5e-37 tr|Q16JS6|Q16JS6_AEDAE Coatomer delta subunit OS=Aedes aegypti G... 156 6e-37 tr|Q6MZV5|Q6MZV5_HUMAN Putative uncharacterized protein DKFZp686... 155 8e-37 tr|B0XDC3|B0XDC3_CULQU Coatomer subunit delta OS=Culex quinquefa... 155 1e-36 tr|Q4RYQ9|Q4RYQ9_TETNG Chromosome 16 SCAF14974, whole genome sho... 155 1e-36 tr|B4JWZ1|B4JWZ1_DROGR GH17851 (Fragment) OS=Drosophila grimshaw... 155 1e-36
>tr|A3B2G5|A3B2G5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017237 PE=4 SV=1 Length = 1330
Score = 194 bits (492), Expect = 3e-48 Identities = 98/121 (80%), Positives = 111/121 (91%) Frame = +3
Query: 147 AQRASIDYRSRMVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYV 326 +QRA + + VVLAASII+K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYV Sbjct: 796 SQRARLVAANYQVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYV 855
Query: 327 ETENVRYVYQPIELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFEL 506 ETENVRYVYQPIE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDE+G+CK AFEL Sbjct: 856 ETENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFEL 915
Query: 507 I 509 I Sbjct: 916 I 916
Score = 193 bits (490), Expect = 5e-48 Identities = 96/111 (86%), Positives = 107/111 (96%) Frame = +3
Query: 177 RMVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQ 356 +MVVLAASII+K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQ Sbjct: 285 KMVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQ 344
Query: 357 PIELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 PIE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDE+G+CK AFELI Sbjct: 345 PIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELI 395
>tr|Q9M640|Q9M640_MAIZE Delta-COP OS=Zea mays PE=2 SV=1 Length = 523
Score = 193 bits (490), Expect = 5e-48 Identities = 96/110 (87%), Positives = 106/110 (96%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASI++K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP Sbjct: 1 MVVLAASIVSKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 IE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDEDGICK AFE+I Sbjct: 61 IEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEDGICKTAFEII 110
>tr|B8AWD9|B8AWD9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_19411 PE=4 SV=1 Length = 607
Score = 191 bits (486), Expect = 1e-47 Identities = 96/120 (80%), Positives = 110/120 (91%) Frame = +3
Query: 150 QRASIDYRSRMVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVE 329 +R + + +VVLAASII+K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYVE Sbjct: 75 RRDILTFALLLVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVE 134
Query: 330 TENVRYVYQPIELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 TENVRYVYQPIE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDE+G+CK AFELI Sbjct: 135 TENVRYVYQPIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELI 194
>tr|B6TDR8|B6TDR8_MAIZE Coatomer subunit delta OS=Zea mays PE=2 SV=1 Length = 517
Score = 191 bits (486), Expect = 1e-47 Identities = 95/110 (86%), Positives = 106/110 (96%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASI++K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP Sbjct: 1 MVVLAASIVSKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 IE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDE+GICK AFE+I Sbjct: 61 IEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGICKTAFEII 110
>tr|B4G0V4|B4G0V4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 516
Score = 191 bits (486), Expect = 1e-47 Identities = 95/110 (86%), Positives = 106/110 (96%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASI++K+GKALVSRQFV+M+RIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP Sbjct: 1 MVVLAASIVSKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 IE LYLLL+TN+QSNILEDL+ LRLLSK+VPEY PSLDE+GICK AFE+I Sbjct: 61 IEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGICKTAFEII 110
>tr|B7EGT8|B7EGT8_ORYSJ cDNA clone:J023027K10, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 518
Score = 190 bits (482), Expect = 4e-47 Identities = 92/110 (83%), Positives = 106/110 (96%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASII+K+GKALVSRQFV+M+RIRI+GLLAAFPKLVG+GKQHTYVETENVRYVYQP Sbjct: 1 MVVLAASIISKSGKALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 IE LYLLL+TN+QSNILEDL+ LRLLSK++PEY PSLDE+G+CK AFEL+ Sbjct: 61 IEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELL 110
>tr|A5B542|A5B542_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008875 PE=4 SV=1 Length = 531
Score = 189 bits (479), Expect = 9e-47 Identities = 95/110 (86%), Positives = 103/110 (93%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASI++K+GK LVSRQFV+MTRIRIE LLAAFPKLVGTGKQHTYVETENVRYVYQP Sbjct: 1 MVVLAASIVSKSGKVLVSRQFVDMTRIRIEALLAAFPKLVGTGKQHTYVETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 IE LYLLLVTN+QSNILEDLE LRLLSK+VPEY SLDE+G+CK AFELI Sbjct: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSVSLDEEGVCKTAFELI 110
>tr|B8LLU4|B8LLU4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 529
Score = 188 bits (478), Expect = 1e-46 Identities = 91/110 (82%), Positives = 105/110 (95%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAAS+ TKTGKALVSRQFV+MTRIRIEGLLAAFPKLVG+GKQHTY+ETENVRYVYQP Sbjct: 1 MVVLAASVTTKTGKALVSRQFVDMTRIRIEGLLAAFPKLVGSGKQHTYIETENVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 +E LYLLL+TN+QSNIL+DL+ LRLLSK+VPEY P LDE+GIC++AFE+I Sbjct: 61 MESLYLLLITNKQSNILQDLDTLRLLSKLVPEYSPELDEEGICRMAFEII 110
>tr|A7P2Q5|A7P2Q5_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030145001 PE=4 SV=1 Length = 568
Score = 187 bits (474), Expect = 3e-46 Identities = 94/109 (86%), Positives = 102/109 (93%) Frame = +3
Query: 183 VVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPI 362 VVLAASI++K+GK LVSRQFV+MTRIRIE LLAAFPKLVGTGKQHTYVETENVRYVYQPI Sbjct: 39 VVLAASIVSKSGKVLVSRQFVDMTRIRIEALLAAFPKLVGTGKQHTYVETENVRYVYQPI 98
Query: 363 ELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 E LYLLLVTN+QSNILEDLE LRLLSK+VPEY SLDE+G+CK AFELI Sbjct: 99 EALYLLLVTNKQSNILEDLETLRLLSKLVPEYSVSLDEEGVCKTAFELI 147
>tr|A9RMY5|A9RMY5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_204046 PE=4 SV=1 Length = 521
Score = 182 bits (462), Expect = 8e-45 Identities = 90/110 (81%), Positives = 104/110 (94%) Frame = +3
Query: 180 MVVLAASIITKTGKALVSRQFVEMTRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 359 MVVLAASII+K+GKALVSRQ+V+M+RIRIEGLLA FPKLVG GKQHTYVET+NVRYVYQP Sbjct: 1 MVVLAASIISKSGKALVSRQYVDMSRIRIEGLLATFPKLVGIGKQHTYVETDNVRYVYQP 60
Query: 360 IELLYLLLVTNRQSNILEDLEMLRLLSKIVPEYCPSLDEDGICKVAFELI 509 +E LYLLLVTN+QSNILED + L+LLSK+VPEY PSLDE+GICK+AFE+I Sbjct: 61 MESLYLLLVTNKQSNILEDRDTLQLLSKLVPEYVPSLDEEGICKMAFEII 110
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