DK955789 |
Clone id |
TST39A01NGRL0024_A15 |
Library |
TST39 |
Length |
669 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_A15. 5' end sequence. |
Accession |
DK955789 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3957Contig1 |
Sequence |
CTATCTCCTGCTCTTCCCCGCATTCTTGGAAGATCCCACCCTTCATCAAGTCAAGCTTCC ATTAATATGCAGAAATCCCTGCTAACCCAATTTTCTTGAAGACCTTTCATCACCTCAAGA GGAGTACGAGCCCAGTTCCTTGGTCATTCTTCAACATGAGTTGCAATGGTTGTAGAGTTC TGAGAAAAGGATGCAGTGACACTTGCATCCTGAGGTCCTCCTTGCAATGGATTGAGTCCC CCGAAGCGCAGGGCCATGCGACCGTTTTCATCGCCAAGTTCTTTGGAAGGGCCGGCATGA TCAGCTTCATCAGTGCTGTGTCAGAGAGCCAGAGGCCAGCTCTCTTTCAATCTCTCTTGT ATGAGGCCTGCGGAAGGACAGTGAATCCGGTGTTCGGGGCTGTTGGACTCTTATGGAGTG GTAATTGGGGGGTATGTCAAGCAGCGGTCGAGACTGTCCTCAAGGGCGGGTCTCTTCGGC CTGCGGCGGCTTGCATGCCTGCCCTCCCTACCAAGCCCACACACTCCCTTACATGCAGAT CCAACCTTCCCCCTCTCACAAATGCTTCTCCCACACTCACCACTCCCTCTAACCAGTCGC TCAAAAGGACCCAATCCGCACAGCCGAGTGCGGAAGCACCTGTTAAGCGGGTGAAAATAT GTGTGCAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9SN23 |
Definition |
sp|Q9SN23|LBD38_ARATH LOB domain-containing protein 38 OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
201.0 |
E-value |
3.0e-51 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B7XG94 |
Definition |
tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Arabidopsis thaliana |
Align length |
109 |
Score (bit) |
201.0 |
E-value |
3.0e-50 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955789|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_A15, 5' (669 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Ara... 201 3e-50 tr|A9S1K7|A9S1K7_PHYPA Predicted protein (Fragment) OS=Physcomit... 200 8e-50 tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Popul... 199 1e-49 tr|B7XG93|B7XG93_ARATH ASYMMETRIC LEAVES2-like 39 protein OS=Ara... 198 2e-49 tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein O... 196 8e-49 tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomit... 196 1e-48 tr|A9RNM5|A9RNM5_PHYPA Predicted protein (Fragment) OS=Physcomit... 194 5e-48 tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Ara... 193 9e-48 tr|A7NU79|A7NU79_VITVI Chromosome chr18 scaffold_1, whole genome... 192 1e-47 tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subs... 189 1e-46 tr|A2XIF2|A2XIF2_ORYSI Putative uncharacterized protein OS=Oryza... 189 1e-46 tr|A7PLN7|A7PLN7_VITVI Chromosome chr7 scaffold_20, whole genome... 189 2e-46 tr|A9TCE3|A9TCE3_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 3e-45 tr|A7QL54|A7QL54_VITVI Chromosome chr3 scaffold_117, whole genom... 183 1e-44 tr|A5AMP6|A5AMP6_VITVI Putative uncharacterized protein OS=Vitis... 183 1e-44 tr|Q9LG92|Q9LG92_ORYSJ Putative seed specific protein Bn15D17A (... 173 8e-42 tr|A2WK94|A2WK94_ORYSI Putative uncharacterized protein OS=Oryza... 173 8e-42 tr|Q7EZ26|Q7EZ26_ORYSJ Os07g0589000 protein OS=Oryza sativa subs... 172 1e-41 tr|B8B806|B8B806_ORYSI Putative uncharacterized protein OS=Oryza... 172 1e-41 tr|B6UCF2|B6UCF2_MAIZE Seed specific protein Bn15D17A OS=Zea may... 171 3e-41 tr|Q75HN5|Q75HN5_ORYSJ Os03g0609500 protein OS=Oryza sativa subs... 169 2e-40 tr|A3AKC0|A3AKC0_ORYSJ Putative uncharacterized protein OS=Oryza... 169 2e-40 tr|A2XJG6|A2XJG6_ORYSI Putative uncharacterized protein OS=Oryza... 169 2e-40 tr|Q1KUM5|Q1KUM5_9ROSI Putative uncharacterized protein OS=Cleom... 164 5e-39 tr|A5BBT8|A5BBT8_VITVI Putative uncharacterized protein (Chromos... 164 6e-39 tr|A9P7Z5|A9P7Z5_POPTR Putative uncharacterized protein OS=Popul... 163 8e-39 tr|A7P383|A7P383_VITVI Chromosome chr1 scaffold_5, whole genome ... 163 1e-38 tr|A5BRK8|A5BRK8_VITVI Putative uncharacterized protein OS=Vitis... 163 1e-38 tr|A2ZTP2|A2ZTP2_ORYSJ Putative uncharacterized protein OS=Oryza... 162 2e-38 tr|Q5QN63|Q5QN63_ORYSJ Seed specific protein Bn15D17A-like OS=Or... 162 2e-38
>tr|B7XG94|B7XG94_ARATH ASYMMETRIC LEAVES2-like 40 protein OS=Arabidopsis thaliana GN=ASL40 PE=2 SV=1 Length = 247
Score = 201 bits (511), Expect = 3e-50 Identities = 94/109 (86%), Positives = 102/109 (93%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS+ CILR +QWIESPEAQGHATVF+AKFFGRAG++SFISAV ESQ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQC 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 482 PALFQSLLYEACGRTVNPV GAVGLLW+GNW VCQAAVETVL+GGSL+P Sbjct: 61 PALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKP 109
>tr|A9S1K7|A9S1K7_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_47789 PE=4 SV=1 Length = 109
Score = 200 bits (508), Expect = 8e-50 Identities = 93/109 (85%), Positives = 101/109 (92%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCSD CILR LQWIE+ EAQGHATVF+AKFFGRAG++ FISAV E+QR Sbjct: 1 MSCNGCRVLRKGCSDNCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMGFISAVPENQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 482 ALFQSLLYEACGRTVNPVFGAVGLLWSGNW +CQAAV+TVLKGG+LRP Sbjct: 61 SALFQSLLYEACGRTVNPVFGAVGLLWSGNWQICQAAVDTVLKGGTLRP 109
>tr|A9PK79|A9PK79_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 242
Score = 199 bits (506), Expect = 1e-49 Identities = 96/119 (80%), Positives = 106/119 (89%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS+ CILR LQWIESPEAQGHATVF+AKFFGRAG++SFIS+V E QR Sbjct: 1 MSCNGCRVLRKGCSENCILRPCLQWIESPEAQGHATVFVAKFFGRAGLMSFISSVPEDQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMPALPT 512 P+LFQSLL+EACGRTVNPV GAVGLLW+GNW VCQAAVETVL+GG+LRP MP L T Sbjct: 61 PSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRP----MPDLLT 115
>tr|B7XG93|B7XG93_ARATH ASYMMETRIC LEAVES2-like 39 protein OS=Arabidopsis thaliana GN=ASL39 PE=2 SV=1 Length = 250
Score = 198 bits (504), Expect = 2e-49 Identities = 103/178 (57%), Positives = 125/178 (70%), Gaps = 10/178 (5%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS+ CILR +QWIE+ +AQGHATVF+AKFFGRAG++SFISAV +SQR Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMP----- 500 PALFQSLLYEACGRTVNPV GA+G+LW+GNW +CQAAVETVL+GGSLRP + Sbjct: 61 PALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPIPELLTHGGGF 120
Query: 501 ---ALPTKPTHSLTCRS--NLPPLTNASPTLTTPSNQSLKRTQSAQPSAEAPVKRVKI 659 PT S C NL + + S S R++S S+ +P KR ++ Sbjct: 121 AGFPSPTSEEASEICTEMLNLQQNDSTDRNIYHHSRFSSSRSRSTMDSS-SPTKRKRL 177
>tr|Q0PN09|Q0PN09_9FABA Lateral organ boundaries domain protein OS=Caragana korshinskii PE=2 SV=1 Length = 231
Score = 196 bits (499), Expect = 8e-49 Identities = 90/109 (82%), Positives = 103/109 (94%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS++CILR LQW+E+PEAQGHATVF+AKFFGRAG++SF+S V E+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWLENPEAQGHATVFVAKFFGRAGLMSFLSNVPETQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 482 PALFQSLL+EACGRTVNPV GAVGLLW+GNW VCQAAVETVL+GG+LRP Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLQGGTLRP 109
>tr|A9T578|A9T578_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_48199 PE=4 SV=1 Length = 107
Score = 196 bits (497), Expect = 1e-48 Identities = 91/107 (85%), Positives = 101/107 (94%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS++CILR LQWI+S +AQGHATVF+AKFFGRAG++SFI+AV E+QR Sbjct: 1 MSCNGCRVLRKGCSESCILRPCLQWIDSADAQGHATVFVAKFFGRAGLMSFITAVPENQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSL 476 PALFQSLLYEACGRTVNPVFGAVGLLW+GNW VCQAAVETVLKGG L Sbjct: 61 PALFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVL 107
>tr|A9RNM5|A9RNM5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117206 PE=4 SV=1 Length = 107
Score = 194 bits (492), Expect = 5e-48 Identities = 90/107 (84%), Positives = 99/107 (92%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS+ CILR LQWI+S +AQGHATVF+AKFFGRAG++ FI+AV E+QR Sbjct: 1 MSCNGCRVLRKGCSEACILRPCLQWIDSADAQGHATVFVAKFFGRAGLMGFITAVPENQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSL 476 PALFQSLLYEACGRTVNPVFGAVGLLW+GNW VCQAAVETVLKGG L Sbjct: 61 PALFQSLLYEACGRTVNPVFGAVGLLWAGNWQVCQAAVETVLKGGVL 107
>tr|B7XG95|B7XG95_ARATH ASYMMETRIC LEAVES2-like 41 protein OS=Arabidopsis thaliana GN=ASL41 PE=2 SV=1 Length = 240
Score = 193 bits (490), Expect = 9e-48 Identities = 90/109 (82%), Positives = 101/109 (92%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCS+TCILR LQWIES E+QGHATVF+AKFFGRAG++SFIS+V E QR Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 482 PALFQSLL+EACGRTVNPV GAVG+LW+ NW VCQAAVETVL+GG+LRP Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRP 109
>tr|A7NU79|A7NU79_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014946001 PE=4 SV=1 Length = 222
Score = 192 bits (489), Expect = 1e-47 Identities = 91/121 (75%), Positives = 108/121 (89%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCSD+CILR+ LQWIE+PEAQG+AT+F++KFFGR+ ++SFISAV E++R Sbjct: 1 MSCNGCRVLRKGCSDSCILRTCLQWIENPEAQGYATLFVSKFFGRSDLMSFISAVPENKR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRPAAACMPALPTK 515 PALFQSLL+EACGRTVNPV GAVGLLW+GNW VCQAAV+TVL GG+LRP + A P K Sbjct: 61 PALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLAGGTLRPIPGIL-AGPIK 119
Query: 516 P 518 P Sbjct: 120 P 120
>tr|Q6AV61|Q6AV61_ORYSJ Os03g0445700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0035N15.7 PE=2 SV=1 Length = 204
Score = 189 bits (481), Expect = 1e-46 Identities = 86/109 (78%), Positives = 100/109 (91%) Frame = +3
Query: 156 MSCNGCRVLRKGCSDTCILRSSLQWIESPEAQGHATVFIAKFFGRAGMISFISAVSESQR 335 MSCNGCRVLRKGCSD C+LR LQWI++ +AQGHATVF+AKFFGRAG++SFISAV E+QR Sbjct: 1 MSCNGCRVLRKGCSDGCVLRPCLQWIDAADAQGHATVFVAKFFGRAGLLSFISAVPEAQR 60
Query: 336 PALFQSLLYEACGRTVNPVFGAVGLLWSGNWGVCQAAVETVLKGGSLRP 482 PALFQSLLYEA GRT+NPV GAVGLLW+GNW +CQAAVETVL+GG++ P Sbjct: 61 PALFQSLLYEAAGRTINPVHGAVGLLWTGNWPLCQAAVETVLRGGAIGP 109
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