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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955795
Clone id TST39A01NGRL0024_A21
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_A21. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAGGCCCTCTCTCTCTCCCCCTCCCTAGCTGATGAATCGGATCAGGCGCTGTGCTGAGCC
CGCTGAGGGAGCCATGGCCGAGCGCGGAGAGATAAGGTGGTGCGTACCCCCTTTGCGAGT
GATGGTGCCCCCCGGAGTGCCAGAGCCTCGCTTGACGCCCTCCTTCCTCGCCAACTGTGC
TGCAGGACAACCTTTTCAAGTTGTGTGTAGCTCTCTGCCCCATGATGGTGACTCTCCCTG
TGTGCAGCAAGCATCTGTTTCCGTGATGGCGGGCAAGGAGGCGGTTGCAAAAGGGCGCCT
GCGAGAGAAGAGCTCGGCAATCAGAGACTACCCTGAGGGATGTCGGCCGGCTTGCAAATT
ATGATCGGCGGGCTCGAGCAATAGGCATCAATAACAGAGCCATTACACATGGTGCTTATA
ATGTGTTCTTGTGGGCAAGAACCATGGCAGAGAGTCTTATTACGGTCAGCACATATTGTG
CTCATGCGGCTCATTCATGTTTGGGGTTCGTACGATCCGGACACATGATATCAAGAACAC
TGTACACCATTCTCTTTTAACCTGGTATAGTTTGGTTTTCAGACTCAAAAAAAAAAAAAA
AAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q2M3C7
Definition sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sapiens
Align length 88
Score (bit) 33.9
E-value 0.62
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955795|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_A21, 5'
         (586 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sap...    34   0.62 
sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 O...    33   1.4  
sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate rece...    33   1.4  
sp|Q2H317|NBP35_CHAGB Cytosolic Fe-S cluster assembling factor N...    32   1.8  
sp|A5UYI4|RL11_ROSS1 50S ribosomal protein L11 OS=Roseiflexus sp...    32   3.1  
sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate rece...    32   3.1  
sp|Q0VDD7|CS057_HUMAN Uncharacterized protein C19orf57 OS=Homo s...    32   3.1  
sp|Q6C3D7|STE20_YARLI Serine/threonine-protein kinase STE20 OS=Y...    30   6.8  
sp|A7NRZ8|RL11_ROSCS 50S ribosomal protein L11 OS=Roseiflexus ca...    30   6.8  
sp|Q2TL32|UBR4_RAT E3 ubiquitin-protein ligase UBR4 OS=Rattus no...    30   8.9  
sp|A2AN08|UBR4_MOUSE E3 ubiquitin-protein ligase UBR4 OS=Mus mus...    30   8.9  
sp|Q5T4S7|UBR4_HUMAN E3 ubiquitin-protein ligase UBR4 OS=Homo sa...    30   8.9  
sp|P11717|MPRI_HUMAN Cation-independent mannose-6-phosphate rece...    30   8.9  

>sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo
           sapiens GN=SPHKAP PE=1 SV=1
          Length = 1700

 Score = 33.9 bits (76), Expect = 0.62
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 23/88 (26%)
 Frame = +2

Query: 113 LRVMVPPGVPEPRLTP--------------SFLANCAAGQPFQVVCSSLPHDGDSPCVQQ 250
           L+   P G+ EP +                S +A C  G+  +V CS  P  G  P   +
Sbjct: 536 LQTQAPQGLKEPSINEYSFPSALCGMTQVASAVAVCGLGEREEVTCSVAP-SGSLPPAAE 594

Query: 251 AS---------VSVMAGKEAVAKGRLRE 307
           AS          S+  GKEA+AKG L+E
Sbjct: 595 ASEAMPPLCGLASMELGKEAIAKGLLKE 622


>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31
           OS=Homo sapiens GN=USP31 PE=1 SV=2
          Length = 1352

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = +2

Query: 62  AEGAMAERGEIRWCVP--PLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSLPHDGDS 235
           +EGA  +RG +R C P  P     PP  P P  +P+  A CAA +P   V     H   +
Sbjct: 80  SEGAAPDRGGLRSCFPPGPAAAPTPPPCPPPPASPAPPA-CAA-EPVPGVAGLRNH--GN 135

Query: 236 PCVQQASVSVMAGKEAVAK 292
            C   A++  ++  E  A+
Sbjct: 136 TCFMNATLQCLSNTELFAE 154


>sp|Q07113|MPRI_MOUSE Cation-independent mannose-6-phosphate receptor
            OS=Mus musculus GN=Igf2r PE=1 SV=1
          Length = 2483

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 203  VCSSL-PHDGDSPCVQQASVSVMAGKEAVAKGRLRE 307
            VC SL PH G  PC  +A+V ++ G + V  G++R+
Sbjct: 1400 VCKSLSPHAGTEPCPPEAAVCLLNGSKPVNLGKVRD 1435


>sp|Q2H317|NBP35_CHAGB Cytosolic Fe-S cluster assembling factor
           NBP35 OS=Chaetomium globosum GN=NBP35 PE=3 SV=1
          Length = 342

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
 Frame = +2

Query: 56  EPAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSLPH--DG 229
           EP E  +A   + +   P L    P   P P    +  A+  AG P Q +C+S P   D 
Sbjct: 9   EPVEDVLANPLKQK---PQLVAPEPEHCPGPESEQAGTADSCAGCPNQAICASAPKGPDP 65

Query: 230 DSPCVQ------QASVSVMAGKEAVAKGRL-REKSSAIRDYPE 337
           D P +       +  + V++GK  V K  L  + + A+   PE
Sbjct: 66  DLPAITARLAGVKHKILVLSGKGGVGKSTLTAQLAQALATNPE 108


>sp|A5UYI4|RL11_ROSS1 50S ribosomal protein L11 OS=Roseiflexus sp.
           (strain RS-1) GN=rplK PE=3 SV=1
          Length = 141

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 5/40 (12%)
 Frame = -2

Query: 216 RELHTT*KGCPAAQLARK-EGVKRGSGTP----GGTITRK 112
           R    T K  PAA L RK  G+++GSGTP     GTIT+K
Sbjct: 64  RSFTITLKTPPAADLLRKVAGIEKGSGTPNRKIAGTITKK 103


>sp|P08169|MPRI_BOVIN Cation-independent mannose-6-phosphate receptor
            OS=Bos taurus GN=IGF2R PE=1 SV=2
          Length = 2499

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 203  VCSSL-PHDGDSPCVQQASVSVMAGKEAVAKGRLRE 307
            VC SL P  G  PC  +A+V ++ G + V  GR+R+
Sbjct: 1416 VCKSLSPQAGSDPCPPEAAVCLLGGPKPVNLGRVRD 1451


>sp|Q0VDD7|CS057_HUMAN Uncharacterized protein C19orf57 OS=Homo
           sapiens GN=C19orf57 PE=1 SV=2
          Length = 668

 Score = 31.6 bits (70), Expect = 3.1
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +2

Query: 59  PAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSL 217
           P  G     G   WC+ P    V  G P+P+ TPS +     G    + CSSL
Sbjct: 284 PTSGPAPGLGPASWCLEP--GSVAQGSPDPQQTPSRMGREGEGTHSSLGCSSL 334


>sp|Q6C3D7|STE20_YARLI Serine/threonine-protein kinase STE20
           OS=Yarrowia lipolytica GN=STE20 PE=3 SV=1
          Length = 1125

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = -2

Query: 141 GTPGGTITRKGGTHHLISPRSAMAPSAGSAQR 46
           GTPGGT    GG  H+ SP     PSA S  R
Sbjct: 258 GTPGGTPMSPGGVAHVTSPGG--GPSAASVHR 287


>sp|A7NRZ8|RL11_ROSCS 50S ribosomal protein L11 OS=Roseiflexus
           castenholzii (strain DSM 13941 / HLO8) GN=rplK PE=3 SV=1
          Length = 141

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = -2

Query: 216 RELHTT*KGCPAAQLARKE-GVKRGSGTP----GGTITRK 112
           R    T K  PAA L RK  G+++GSGTP     GTIT K
Sbjct: 64  RSFTITLKTPPAADLLRKAAGIEKGSGTPNRKIAGTITAK 103


>sp|Q2TL32|UBR4_RAT E3 ubiquitin-protein ligase UBR4 OS=Rattus
            norvegicus GN=Ubr4 PE=2 SV=2
          Length = 5194

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = +1

Query: 406  HMVLIMCSCGQEPWQRVLLRSAHIVLMRLIHVWGSYDPDT 525
            H+  +  + G+E W+   L++A+     L+ VWG + P++
Sbjct: 4902 HLAAVRLARGREEWESAALQNANTKCNGLLPVWGPHVPES 4941
tr_hit_id Q2SY44
Definition tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301)
Align length 102
Score (bit) 34.7
E-value 4.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955795|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_A21, 5'
         (586 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I OS=Bu...    35   4.1  
tr|B6KKJ0|B6KKJ0_TOXGO Putative uncharacterized protein OS=Toxop...    35   4.1  
tr|Q6AVC5|Q6AVC5_ORYSJ Putative uncharacterized protein OJ1212_C...    34   7.0  
tr|Q5F3N7|Q5F3N7_CHICK Putative uncharacterized protein OS=Gallu...    33   9.1  
tr|A8HY25|A8HY25_CHLRE Predicted protein OS=Chlamydomonas reinha...    33   9.1  

>tr|Q2SY44|Q2SY44_BURTA Glutamine amidotransferase, class I
           OS=Burkholderia thailandensis (strain E264 / ATCC 700388
           / DSM 13276 / CIP 106301) GN=BTH_I1617 PE=4 SV=1
          Length = 444

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 29/102 (28%), Positives = 42/102 (41%)
 Frame = -2

Query: 360 NLQAGRHPSG*SLIAELFSRRRPFATASLPAITETDACCTQGESPSWGRELHTT*KGCPA 181
           N  A     G S  A   +   P A ASLP++++          P  G  +H    G  A
Sbjct: 4   NTSARTDQPGSSSSASAATPSGPAAPASLPSVSD---------KPPAGATVHV---GAFA 51

Query: 180 AQLARKEGVKRGSGTPGGTITRKGGTHHLISPRSAMAPSAGS 55
           AQ+A  + +      P GTI   G      +P +AM  +AG+
Sbjct: 52  AQIAAAQDIGDPGSAPTGTIAEPGAPGVAAAPAAAMPGAAGA 93


>tr|B6KKJ0|B6KKJ0_TOXGO Putative uncharacterized protein OS=Toxoplasma
            gondii ME49 GN=TGME49_089280 PE=4 SV=1
          Length = 975

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 11/111 (9%)
 Frame = +2

Query: 38   RIRRCAEPAEGAMAERGEIRWCVPPLRVMVPPGVPEPRLTPSFLANCAAGQPFQVVCSSL 217
            R+R+ AE  +     R E R+C  PL       V  P  + +F       Q F   C  L
Sbjct: 757  RLRKHAEETDAGTEVRREPRFCPEPLHASRSVSVTRPSTSSTFFLR--EDQAFAEACEEL 814

Query: 218  PHDGDSPCVQQASVSVMA--------GKEAVAKGRLREKS---SAIRDYPE 337
                ++    QAS++++A        GKEA  K R +EK+   S+ R  PE
Sbjct: 815  RVFLEAGV--QASLALLAAPQGASQPGKEAAGKDREKEKTGLVSSSRQEPE 863


>tr|Q6AVC5|Q6AVC5_ORYSJ Putative uncharacterized protein
           OJ1212_C10.5 OS=Oryza sativa subsp. japonica
           GN=OJ1212_C10.5 PE=4 SV=1
          Length = 171

 Score = 33.9 bits (76), Expect = 7.0
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -2

Query: 165 KEGVKRGSGTPGGTITRKGGTHHLISPRSAMAPSAGSAQRLIRFIS*GGGER 10
           ++G + G G PGG   R+GG  H I  R A+   A +  R  R+ S   G R
Sbjct: 91  EDGTRSGVGGPGGGARRQGGARHRIRRRGALRGFAAAVARRRRWRSPRLGSR 142


>tr|Q5F3N7|Q5F3N7_CHICK Putative uncharacterized protein OS=Gallus
           gallus GN=RCJMB04_11f1 PE=2 SV=1
          Length = 1105

 Score = 33.5 bits (75), Expect = 9.1
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 17  PPP*LMNRIRRCAEPAEGAMAE---RGEIRWCVPPLRVMVPPGVPEPRLTPSFLAN 175
           PPP   ++      PA  A+ E    G +R C  PLR  +P  +P P L PS  A+
Sbjct: 19  PPPPHRSQPDGAGPPAPPALPESLRNGYVRGCATPLRRDLPESLPSPPLCPSAAAS 74


>tr|A8HY25|A8HY25_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
            GN=CHLREDRAFT_167400 PE=4 SV=1
          Length = 1328

 Score = 33.5 bits (75), Expect = 9.1
 Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
 Frame = +1

Query: 115  ASDGAPRSARASLDALLPRQ-----LCCRTTFSSCV*LSAP*W*LSLCAASICFRDGGQG 279
            AS   P +A A   AL+PR      L    T +     +AP   L+  AA++C   GG+G
Sbjct: 778  ASPPHPSAAPAPAPALMPRVSAPPVLLPTGTGAGAPAAAAPPS-LAAAAAALCSSPGGRG 836

Query: 280  GGCKRAPAREELGNQRLP*GMSAGLQIMIGGL 375
            GG   +PA    G++      +AGL  + GGL
Sbjct: 837  GGVAPSPASLTAGSRG---SRTAGLSAVRGGL 865