DK955796 |
Clone id |
TST39A01NGRL0024_A22 |
Library |
TST39 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_A22. 5' end sequence. |
Accession |
DK955796 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
ATTTGTTCTGCGAAAGTATTATGTTAGCTTGTTACATCATTATGAGCAGGTTTATTTCTT TGGAACACAGGGTCCACTAGTTGCTCCTCTGATCTCAGCGTCTATTCCAAGCCAAAGCCC TGGGCAACAGTCAGTAGACAATGGATCCATGATTAATGGTGAGGCGGAGAATGGAGAGCT AGTTATCAAGAAAAGGAAGAGGAGGATAGAAGATTCTCCTCAGTTGAATGAAGCCGATTT TGCAGTCCCTATTGGCCATGCAGTATCTGGAGTGATTGATGGGAAATTTGAGAGAGGATA TCTTGTCACAGTCTCTGTGGGTACTGAAAAGCTGAGGGGTATTCTTTATCACTTACCTCT GGAAAACGTGACCCCTCAGTTTGCTTCAGTTTCAGAGATGGCCAAGGGAGTTGTTATGGA TTCTGTCCCAGAAGTTCGAAGAAGGCGGAGAAGACGTCGAAAAGATGAGATGCCAAAGAA GGACCCTAATGCACCTAAACCAAATAGAAGTGGTTATAATTTCTTTTTCCAGGAGCATCG GAAGCGATTAAAAGCATTGCACC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O04235 |
Definition |
sp|O04235|SSRP1_VICFA FACT complex subunit SSRP1 OS=Vicia faba |
Align length |
66 |
Score (bit) |
36.6 |
E-value |
0.088 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NW05 |
Definition |
tr|A9NW05|A9NW05_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
188 |
Score (bit) |
158.0 |
E-value |
2.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955796|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_A22, 5' (563 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NW05|A9NW05_PICSI Putative uncharacterized protein OS=Picea... 158 2e-37 tr|A9TX35|A9TX35_PHYPA Predicted protein (Fragment) OS=Physcomit... 135 1e-30 tr|A9RCM0|A9RCM0_PHYPA Predicted protein (Fragment) OS=Physcomit... 132 1e-29 tr|A5BNN4|A5BNN4_VITVI Putative uncharacterized protein (Chromos... 130 4e-29 tr|Q9MAT6|Q9MAT6_ARATH F13M7.13 protein (At1g04880) OS=Arabidops... 120 7e-26 tr|A7QQE8|A7QQE8_VITVI Chromosome undetermined scaffold_142, who... 109 1e-22 tr|Q7XXN0|Q7XXN0_ORYSJ Glutathione S-transferase GST 16-like pro... 107 4e-22 tr|A2Z3N6|A2Z3N6_ORYSI Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|A9PG95|A9PG95_POPTR Putative uncharacterized protein OS=Popul... 105 2e-21 tr|Q6K7A1|Q6K7A1_ORYSJ Os02g0469900 protein OS=Oryza sativa subs... 100 7e-20 tr|B8AHJ4|B8AHJ4_ORYSI Putative uncharacterized protein OS=Oryza... 100 7e-20 tr|A9NUT6|A9NUT6_PICSI Putative uncharacterized protein OS=Picea... 99 1e-19 tr|B6SJK4|B6SJK4_MAIZE HMG box family protein OS=Zea mays PE=2 SV=1 99 2e-19 tr|Q9SGS2|Q9SGS2_ARATH T23E18.4 (At1g76110) (Putative uncharacte... 93 1e-17 tr|Q9LTT3|Q9LTT3_ARATH High mobility group protein-like (At3g133... 86 1e-15 tr|A5AJY3|A5AJY3_VITVI Putative uncharacterized protein OS=Vitis... 78 4e-13 tr|A3A6Q1|A3A6Q1_ORYSJ Putative uncharacterized protein OS=Oryza... 77 5e-13 tr|Q9LG02|Q9LG02_ARATH F20N2.8 OS=Arabidopsis thaliana PE=4 SV=1 64 7e-09 tr|A7NVQ4|A7NVQ4_VITVI Chromosome chr18 scaffold_1, whole genome... 63 1e-08 tr|A9RZK7|A9RZK7_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.030 tr|A7R5P2|A7R5P2_VITVI Chromosome undetermined scaffold_1017, wh... 40 0.067 tr|A9RB03|A9RB03_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.088 tr|B8LLB2|B8LLB2_PICSI Putative uncharacterized protein OS=Picea... 39 0.19 tr|A4S3N8|A4S3N8_OSTLU Predicted protein OS=Ostreococcus lucimar... 39 0.25 tr|B5X4K7|B5X4K7_SALSA High mobility group protein B3 OS=Salmo s... 38 0.43 tr|Q9FLX2|Q9FLX2_ARATH Arabidopsis thaliana genomic DNA, chromos... 38 0.43 tr|Q5HZ10|Q5HZ10_ARATH At5g52890 OS=Arabidopsis thaliana PE=2 SV=1 38 0.43 tr|Q010B7|Q010B7_OSTTA Chromosome 10 contig 1, DNA sequence (Fra... 38 0.43 tr|B0EV32|B0EV32_ENTDI Non-histone chromosomal protein, putative... 38 0.43 tr|O49713|O49713_ARATH Putative uncharacterized protein AT4g2190... 37 0.57
>tr|A9NW05|A9NW05_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 481
Score = 158 bits (400), Expect = 2e-37 Identities = 88/188 (46%), Positives = 110/188 (58%), Gaps = 1/188 (0%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 FVLRKYY+SLL+HYEQVYFFG QG + P A++P+ SP S + + N + + Sbjct: 140 FVLRKYYISLLYHYEQVYFFGAQGQPIPP--PAALPAPSPVSHSKNINELANPPSVEAKS 197
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 ++KKRKR D +GH V+GVIDGKFE YL+TV VG+EKLRG+LY +P Sbjct: 198 LLKKRKR----------VDPMSSMGHPVTGVIDGKFENAYLITVMVGSEKLRGVLYEMPA 247
Query: 362 ENVTPQFASVSEMAKGVVM-DSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEH 538 QF D+ V KDEM K+DP+ PKPNRSGYNFFF E Sbjct: 248 GVSGEQFLQAPSCTNNSNNGDTASGVRPRRRRRRKDEMKKRDPDHPKPNRSGYNFFFAEQ 307
Query: 539 RKRLKALH 562 +LKALH Sbjct: 308 HTKLKALH 315
>tr|A9TX35|A9TX35_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152159 PE=4 SV=1 Length = 312
Score = 135 bits (341), Expect = 1e-30 Identities = 78/193 (40%), Positives = 106/193 (54%), Gaps = 6/193 (3%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 ++LRKYYV LL+++EQ YFFG +GPL+ P +VD S + + Sbjct: 91 YILRKYYVGLLYYFEQAYFFGKKGPLIPP-------------PTVDIASTPTEDQPGFKR 137
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 K++ I+ P A IG V I+GKFE G+LV+V+VGTEK+RG+LYH+P Sbjct: 138 TRKRKILPIQSMP-------AQSIGLTVRTTIEGKFEHGFLVSVTVGTEKMRGVLYHVPA 190
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXK------DEMPKKDPNAPKPNRSGYNF 523 PQ A + + + + K D+MPKKDPNAP+P+R+GYNF Sbjct: 191 MQRAPQHAYIPNYPATLGAEPIITREEFSRRGLKRKRRRTDDMPKKDPNAPRPHRTGYNF 250
Query: 524 FFQEHRKRLKALH 562 FF E R RLKALH Sbjct: 251 FFAEQRARLKALH 263
>tr|A9RCM0|A9RCM0_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_51717 PE=4 SV=1 Length = 290
Score = 132 bits (333), Expect = 1e-29 Identities = 80/187 (42%), Positives = 109/187 (58%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 +VLRKYY++LLHHYEQ+YFFG++G LVAP S + + N S + Sbjct: 91 YVLRKYYITLLHHYEQLYFFGSRGLLVAP--------PSKHSKLLPNYSFYFSVTSD--- 139
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 K+K+ I + A +G+AVSG I+GKFE GYLVTV+VGTEKLRG++YH+P Sbjct: 140 YCSKKKQCICSAVNPVSA-----VGNAVSGAIEGKFEDGYLVTVTVGTEKLRGVIYHIPP 194
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEHR 541 PQ A V + + ++E+ KKDPNAP+ NR+GYNFFF E R Sbjct: 195 GQRVPQHAQVKIRKRKL----------------REEL-KKDPNAPRSNRTGYNFFFAEER 237
Query: 542 KRLKALH 562 +LK ++ Sbjct: 238 AKLKVIY 244
>tr|A5BNN4|A5BNN4_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_58, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00031686001 PE=4 SV=1 Length = 461
Score = 130 bits (328), Expect = 4e-29 Identities = 84/190 (44%), Positives = 103/190 (54%), Gaps = 3/190 (1%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 FVLRKYYVSLLHHYEQ+YFF QG AP+ + + SQSP V + + + E Sbjct: 108 FVLRKYYVSLLHHYEQIYFFKAQG--WAPISADA--SQSPSITPVPSHGLAEPVLPSPES 163
Query: 182 VIKK-RKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLP 358 +++RI + A A V GVIDGKFE GYLVTV++GTEKL+G+LY P Sbjct: 164 QPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKLKGVLYEAP 223
Query: 359 L--ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQ 532 PQ+ SV + K E+ K+DP PKPNRSGYNFFF Sbjct: 224 QTPARQVPQYFSV--ITNNTESTPAAPTVHRRRRRKKSEIKKRDPAHPKPNRSGYNFFFA 281
Query: 533 EHRKRLKALH 562 E RLK LH Sbjct: 282 EQHARLKPLH 291
>tr|Q9MAT6|Q9MAT6_ARATH F13M7.13 protein (At1g04880) OS=Arabidopsis thaliana GN=At1g04880 PE=2 SV=1 Length = 448
Score = 120 bits (300), Expect = 7e-26 Identities = 79/201 (39%), Positives = 105/201 (52%), Gaps = 14/201 (6%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 +VLRKYY SLL++YEQ+YFF + G + P S PS P I G + Sbjct: 102 YVLRKYYFSLLNNYEQIYFFRSNGQI--PPDSMQSPSARP--------CFIQGAIRPSQ- 150
Query: 182 VIKKRKRRIEDSPQLNEADF--AVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHL 355 + + P++N A+F G V GVIDGKFE GYLVTV++G+E+L+G+LY L Sbjct: 151 --ELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQL 208
Query: 356 PLEN------------VTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPK 499 +N V P ++S +GV V K E+ ++DP+ PK Sbjct: 209 LPQNTVSYQTPQQSHGVLPNTLNISANPQGV----AGGVTKRRRRRKKSEIKRRDPDHPK 264
Query: 500 PNRSGYNFFFQEHRKRLKALH 562 PNRSGYNFFF E RLK LH Sbjct: 265 PNRSGYNFFFAEQHARLKPLH 285
>tr|A7QQE8|A7QQE8_VITVI Chromosome undetermined scaffold_142, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003326001 PE=4 SV=1 Length = 331
Score = 109 bits (272), Expect = 1e-22 Identities = 70/187 (37%), Positives = 99/187 (52%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 FVLRKYY+SLLHHYEQVY+F Q P+ A + SP ING A Sbjct: 124 FVLRKYYLSLLHHYEQVYYFRKQS---FPISMADPLNSSP----------INGSATTPVF 170
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 + SP+L G V+G IDGKF+ GYLV+V++G++ L+G+LYH+P Sbjct: 171 QDSATTNDLPVSPRLQP-------GCLVTGTIDGKFDNGYLVSVNLGSDVLKGVLYHIP- 222
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEHR 541 + S M++ +VP + ++ +DP+ PK ++SGYNFFF E+ Sbjct: 223 -------NNESHMSRSSNASAVP----PPRNWKRSQLALRDPSRPKRSQSGYNFFFAENY 271
Query: 542 KRLKALH 562 RLK L+ Sbjct: 272 ARLKPLY 278
>tr|Q7XXN0|Q7XXN0_ORYSJ Glutathione S-transferase GST 16-like protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0705E11.9 PE=4 SV=1 Length = 306
Score = 107 bits (267), Expect = 4e-22 Identities = 68/187 (36%), Positives = 91/187 (48%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 +VLR+YY+SLLHHYEQVYFF G L+ P +AS +++P ++ AE G+ Sbjct: 91 YVLRRYYLSLLHHYEQVYFFRAHGALLRP--AASALTKTPRRKMRGTSDQSPAAAEAGKR 148
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 + L E P +V+G IDGKFE GYLVTV + E LRG+LY + Sbjct: 149 M------------ALPERLGGEPCSFSVTGSIDGKFEHGYLVTVKIAAETLRGVLYRVAP 196
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEHR 541 P + P + ++DP P+PNRS YNFFF+E Sbjct: 197 PPPPPA--------------APPPPPPPARGRRRRGRRQRDPAQPRPNRSAYNFFFKEKH 242
Query: 542 KRLKALH 562 LKA H Sbjct: 243 PELKATH 249
>tr|A2Z3N6|A2Z3N6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32246 PE=4 SV=1 Length = 306
Score = 107 bits (267), Expect = 4e-22 Identities = 68/187 (36%), Positives = 91/187 (48%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 +VLR+YY+SLLHHYEQVYFF G L+ P +AS +++P ++ AE G+ Sbjct: 91 YVLRRYYLSLLHHYEQVYFFRAHGALLRP--AASALTKTPRRKMRGTSDQSPAAAEAGKR 148
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 + L E P +V+G IDGKFE GYLVTV + E LRG+LY + Sbjct: 149 M------------ALPERLGGEPCSFSVTGSIDGKFEHGYLVTVKIAAETLRGVLYRVAP 196
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEHR 541 P + P + ++DP P+PNRS YNFFF+E Sbjct: 197 PPPPPA--------------APPPPPPPARGRRRRGRRQRDPAQPRPNRSAYNFFFKEKH 242
Query: 542 KRLKALH 562 LKA H Sbjct: 243 PELKATH 249
>tr|A9PG95|A9PG95_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 317
Score = 105 bits (261), Expect = 2e-21 Identities = 69/191 (36%), Positives = 98/191 (51%), Gaps = 4/191 (2%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 FVL+K+Y SLL+HYEQV+FF QGP+ P + + P SP ++ EL Sbjct: 90 FVLKKHYFSLLYHYEQVHFFKIQGPVSTPAV--AFPLGSPSSKT--------------EL 133
Query: 182 -VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYH-- 352 +++ I D P + + + SG I+GKF+ GYLV+V +G+E L G+LYH Sbjct: 134 AIVEYSPEPIRDCPDPSTESSS---SFSASGTIEGKFDCGYLVSVQLGSEVLHGVLYHPD 190
Query: 353 -LPLENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFF 529 L N PQ+ G ++ P + DP+ PKPNRSGYNFFF Sbjct: 191 QQDLSNSIPQY-------DGAIVPYTPN----RRRRRRRSRRSGDPSYPKPNRSGYNFFF 239
Query: 530 QEHRKRLKALH 562 E +LK+L+ Sbjct: 240 AEKHYKLKSLY 250
>tr|Q6K7A1|Q6K7A1_ORYSJ Os02g0469900 protein OS=Oryza sativa subsp. japonica GN=OJ1371_D04.11 PE=2 SV=1 Length = 467
Score = 100 bits (248), Expect = 7e-20 Identities = 63/184 (34%), Positives = 92/184 (50%) Frame = +2
Query: 2 FVLRKYYVSLLHHYEQVYFFGTQGPLVAPLISASIPSQSPGQQSVDNGSMINGEAENGEL 181 F+L+KYY+SLL+H+E++Y F QG Q D+ S+ E + Sbjct: 148 FMLKKYYMSLLYHFERLYLFEAQG----------------WYQETDSRSISCIEMKAEGQ 191
Query: 182 VIKKRKRRIEDSPQLNEADFAVPIGHAVSGVIDGKFERGYLVTVSVGTEKLRGILYHLPL 361 +KRKR +D A + + V +IDGKFE GY+VTV +G++ + +LY+ Sbjct: 192 ASRKRKRGSNSC----SSDLAASLDNDVQVIIDGKFEHGYIVTVIMGSKSTKAVLYNCTE 247
Query: 362 ENVTPQFASVSEMAKGVVMDSVPEVXXXXXXXXKDEMPKKDPNAPKPNRSGYNFFFQEHR 541 E P V +DS + K ++ DPN PKPNRSGYNFFFQ+ Sbjct: 248 EPAVPT------AVPHVAIDSAEGIRPRRRRRRK-KLSTTDPNHPKPNRSGYNFFFQDQH 300
Query: 542 KRLK 553 ++LK Sbjct: 301 RKLK 304
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