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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955803
Clone id TST39A01NGRL0024_B05
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_B05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GCCTGACTATGCTGCTCCTGAGCCTCAGTGTCAGTCATCTTCTCTTGCTTGGGGTTAGAC
TCTCTTCCTGACTCCTCAGGAATGGGGTCAACACGAATGGTGGATTTCCGACCACGACTG
GATTTTGGTGCCATTGCTGAAAACTTCCAATTGGGAGAAGAGTCTTCCAGTCAACGAGCT
TCAGCCCGTGCCACCGTGATCGCCAAAATGGAATTACTTAGTAGTTACTATGGTAATTAC
TACAATAAACCGGAAGTGTATAAATAGGGCCCATTACATTGTAATCGGGTTGGCAATTGT
TATCATTTGGGTTAGCGCCTTGGCTACACTTGTACTTGAGAATCATTGGCAGTATTGTTG
GCTGTACTCTCTCTTTGTAAATCATATTCGCTGTAATCTTGATCTGTAATTCCAAGCATG
GCATATATTCCAGTTACACTTACTTCTCGTCTAGTCTTTTGATTCTGAATCTGAACCTTA
TTTCCAGCACATAAGTTTGATTCTTATTTCAGTATCCAAATTCCAGTCTGGTTTCTGATT
CCTCTTCAGTCTACTGTCTGAAATTTTCCTACACT
■■Homology search results ■■ -
sp_hit_id Q833Y9
Definition sp|Q833Y9|PURL_ENTFA Phosphoribosylformylglycinamidine synthase II OS=Enterococcus faecalis
Align length 42
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955803|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_B05, 5'
         (575 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q833Y9|PURL_ENTFA Phosphoribosylformylglycinamidine synthase ...    32   2.3  
sp|Q73I75|COXX_WOLPM Protoheme IX farnesyltransferase OS=Wolbach...    32   3.0  
sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1...    31   5.1  
sp|O12164|ENV_HV192 Envelope glycoprotein gp160 OS=Human immunod...    31   5.1  
sp|Q06117|CR3BB_BACTU Pesticidal crystal protein cry3Bb OS=Bacil...    30   6.6  

>sp|Q833Y9|PURL_ENTFA Phosphoribosylformylglycinamidine synthase II
           OS=Enterococcus faecalis GN=purL PE=3 SV=1
          Length = 739

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -1

Query: 470 IQNQKTRREVSVTGIYAMLGITDQDYSEYD--LQRESTANNT 351
           + N+ T +E+  T +YA  G+TD++Y + +  LQRE     T
Sbjct: 1   MMNEPTPKEIKETRLYAEWGLTDEEYHQIETILQREPNYTET 42


>sp|Q73I75|COXX_WOLPM Protoheme IX farnesyltransferase OS=Wolbachia
           pipientis wMel GN=ctaB PE=3 SV=1
          Length = 295

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 14/116 (12%)
 Frame = +2

Query: 101 WISDHDWILVPLLKTSNWEK-SLPVNELQPVPP*SPKWNYLV-VTMVITTINRKCINRAH 274
           W   H W L  L K+ ++ K S+P++ +   P  + K+  +  V +V+T++      +  
Sbjct: 181 WTPPHFWAL-SLNKSEDYAKASIPMSNIVYGPEKTRKYILIYSVLLVLTSLLPALFLKKA 239

Query: 275 YIVIGLAI----VIIWVSALATLVLENH--------WQYCWLYSLFVNHIRCNLDL 406
            + + +A     V IW  A++ +  +NH        +   +L+SLF + I C++DL
Sbjct: 240 LLYLSMATFEGCVFIWY-AVSVMKFKNHSSQKKMFSYSISYLFSLFASIIFCSIDL 294


>sp|P04052|RPB1_DROME DNA-directed RNA polymerase II subunit RPB1
            OS=Drosophila melanogaster GN=RpII215 PE=1 SV=4
          Length = 1887

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -2

Query: 367  VQPTILPMILKYKCSQ--GANPNDNNCQPDYNVMGPIYTLPVYCS 239
            V P+  P    Y  S   GA+PN +   P+Y+   P+Y  P Y S
Sbjct: 1575 VSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYASPRYAS 1619


>sp|O12164|ENV_HV192 Envelope glycoprotein gp160 OS=Human
           immunodeficiency virus type 1 (isolate 92BR025 group M
           subtype C) GN=env PE=3 SV=1
          Length = 856

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 291 WQLLS--FGLAPWLHLYLRIIGSIVGCTLSL*IIFAVILICN 410
           WQ L   FG+  WL  Y++I   IVG  + L IIFAV+ I N
Sbjct: 659 WQNLWTWFGITNWLW-YIKIFIKIVGGLIGLRIIFAVLSIVN 699


>sp|Q06117|CR3BB_BACTU Pesticidal crystal protein cry3Bb OS=Bacillus
           thuringiensis GN=cry3Bb PE=1 SV=1
          Length = 652

 Score = 30.4 bits (67), Expect = 6.6
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = -1

Query: 479 KVQIQNQKTRREVSVTGIYAM------LGITDQDYSEYDLQRESTANNT 351
           K+    QK  R ++ T + A       LG+T  D+S+YD Q+  T+  T
Sbjct: 392 KLSFDGQKVYRTIANTDVAAWPNGKVYLGVTKVDFSQYDDQKNETSTQT 440
tr_hit_id A1CYT4
Definition tr|A1CYT4|A1CYT4_NEOFI MYB DNA-binding domain protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 54
Score (bit) 37.0
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955803|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_B05, 5'
         (575 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1CYT4|A1CYT4_NEOFI MYB DNA-binding domain protein OS=Neosart...    37   0.77 
tr|B3RW58|B3RW58_TRIAD Putative uncharacterized protein OS=Trich...    35   3.8  
tr|Q4X2N3|Q4X2N3_PLACH CIR protein, putative (Fragment) OS=Plasm...    34   6.5  
tr|Q2KWE2|Q2KWE2_BORA1 Membrane-associated phospholipid phosphat...    33   8.6  
tr|B6N9D0|B6N9D0_BRAFL Putative uncharacterized protein OS=Branc...    33   8.6  
tr|B3L9D7|B3L9D7_PLAKH Putative uncharacterized protein OS=Plasm...    33   8.6  
tr|B8M318|B8M318_9EURO Dimethylaniline monooxygenase, putative O...    33   8.6  

>tr|A1CYT4|A1CYT4_NEOFI MYB DNA-binding domain protein
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_034720 PE=4 SV=1
          Length = 956

 Score = 37.0 bits (84), Expect = 0.77
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = -1

Query: 164 DSSPNWKFSAMA-PKSSRGRKSTIRVDPIPEESGRESNPKQEKMTDTEAQEQHS 6
           DS  N + +A+  PK+S+  KSTI+ + IP+E+  ES    E  +DT   E  S
Sbjct: 649 DSVVNAETNAIPRPKASKPSKSTIKEEEIPQETSSESESDSESASDTSDSEDES 702


>tr|B3RW58|B3RW58_TRIAD Putative uncharacterized protein
           OS=Trichoplax adhaerens GN=TRIADDRAFT_55893 PE=4 SV=1
          Length = 345

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
 Frame = +2

Query: 278 IVIGLAIVIIWVS----ALATLVLENHWQYCWLYSLFVNHIRCNLDL*FQAWHIFQLHLL 445
           ++ G+ ++I W+     A   L+++  W++C  Y L ++ I+ N  +  QAWH+F   L+
Sbjct: 151 VMFGIILLICWILPTFVAFLPLIID-WWRFCPYYCL-MSEIKANRRISLQAWHVFWAFLM 208

Query: 446 LV 451
            +
Sbjct: 209 FL 210


>tr|Q4X2N3|Q4X2N3_PLACH CIR protein, putative (Fragment)
           OS=Plasmodium chabaudi GN=PC200011.00.0 PE=4 SV=1
          Length = 357

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 14/56 (25%), Positives = 33/56 (58%)
 Frame = -1

Query: 497 NLCAGNKVQIQNQKTRREVSVTGIYAMLGITDQDYSEYDLQRESTANNTANDSQVQ 330
           NLC  N+ +++N+K R ++  T +   + ++D+  +E  L  ES+ + + N  +++
Sbjct: 229 NLCKSNEQKLENEKARSDILETVMDIPVSLSDEPPTEVSLSGESSGDISDNQEELE 284


>tr|Q2KWE2|Q2KWE2_BORA1 Membrane-associated phospholipid phosphatase
           OS=Bordetella avium (strain 197N) GN=BAV0834 PE=3 SV=1
          Length = 253

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
 Frame = +2

Query: 200 SPKWNYLVVTMVITTINRKCINRAHY---IVIGLAIVIIWVSALATLVLEN--HW 349
           SP+W + V+T+ +     + INR H+   + +G  I I     LA  +L+   HW
Sbjct: 170 SPRWRWPVMTLAVLVAASRVINRDHFLSDVCVGALIAICCAVLLAPRILDTRYHW 224


>tr|B6N9D0|B6N9D0_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_126619 PE=4 SV=1
          Length = 1270

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = -1

Query: 200 ITVARAEAR*LEDSSPNWKFSAMAPKSSRGRKSTIRVDPIPEESGRESNPKQEKMTDTEA 21
           ++V R++ R   DS P+   SA   KS+RG K+  +V   PEE+G   + K  K    E 
Sbjct: 453 VSVRRSDRRHQSDSHPSPVKSAA--KSTRGSKAAAKVKTEPEEAGPSEDEKHAKKRKRED 510

Query: 20  QEQH 9
             ++
Sbjct: 511 DSEY 514


>tr|B3L9D7|B3L9D7_PLAKH Putative uncharacterized protein OS=Plasmodium
            knowlesi (strain H) GN=PKH_124330 PE=4 SV=1
          Length = 4080

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = -1

Query: 482  NKVQIQNQKTRREVSVTGIYAMLGITDQ-DYSEYDLQRESTANNTANDSQVQ 330
            NK++++   TRR++S     AM G T+Q D  +Y +++E+   + +  S V+
Sbjct: 1152 NKIKVEQDITRRDISPPSAVAMAGDTNQTDNIDYHIKKETLPKDESKSSYVE 1203


>tr|B8M318|B8M318_9EURO Dimethylaniline monooxygenase, putative
           OS=Talaromyces stipitatus ATCC 10500 GN=TSTA_092360 PE=4
           SV=1
          Length = 494

 Score = 33.5 bits (75), Expect = 8.6
 Identities = 13/40 (32%), Positives = 26/40 (65%)
 Frame = -2

Query: 256 LPVYCSNYHSNY*VIPFWRSRWHGLKLVDWKTLLPIGSFQ 137
           L VYC+ Y +++   PFW ++ +G ++ D+K    +G++Q
Sbjct: 305 LVVYCTGYKASF---PFWNTKVNGTEIYDYKHEYVVGNYQ 341