DK955811 |
Clone id |
TST39A01NGRL0024_B13 |
Library |
TST39 |
Length |
532 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_B13. 5' end sequence. |
Accession |
DK955811 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CACACACACACGCGACACAATCTCACATAGCCGGTGCACATGGATCCATCCACCCGCAAA ATCAAGGTTGGCATCAACGGCTTTGGAAGAATTGGGCGCCTGGTTGCTCGTGTTATATTG CAGAGAGATGACATTGAGCTCCTTGCCATCAACGACCCCTTCCTCACCACTGCCCACATG GCATACATGTGCAAGTATGATAGTGTACATGGCAAGCTAAAAGATGGAGAAGTAGAGGTG CAAGATAACACGACCCTTCGACTTGGTGCGCATACGATCTCAACTTATGGGTTTAGGGAA CCATCAGAGATACCTTGGAGCCAAACGAATGTTGAGTACGTGGTTGAGTCTAGTGGTGCT TTTACTGACAAGGAGAAAGCATCCGGCCATCTTAAGGGGGGAGCTAAGCGAGTAGTTATT ACGGCACCGAGTAAAGATGCTCCAATGTTTGTCATGGGGGTTAATGAGCAAGACTACAAG GAGGAGCTTCTTGTTGTCTCAAATGCAAGTTGTACCACAAATGGTTTGGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q39769 |
Definition |
sp|Q39769|G3PC_GINBI Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba |
Align length |
157 |
Score (bit) |
229.0 |
E-value |
5.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955811|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_B13, 5' (519 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q39769|G3PC_GINBI Glyceraldehyde-3-phosphate dehydrogenase, c... 229 5e-60 sp|P34783|G3P_ATRNU Glyceraldehyde-3-phosphate dehydrogenase OS=... 223 3e-58 sp|P25858|G3PC_ARATH Glyceraldehyde-3-phosphate dehydrogenase, c... 223 4e-58 sp|P34924|G3PC_PINSY Glyceraldehyde-3-phosphate dehydrogenase, c... 222 7e-58 sp|P26518|G3PC_MAGLI Glyceraldehyde-3-phosphate dehydrogenase, c... 222 7e-58 sp|P04796|G3PC_SINAL Glyceraldehyde-3-phosphate dehydrogenase, c... 221 1e-57 sp|P17878|G3PC_MESCR Glyceraldehyde-3-phosphate dehydrogenase, c... 220 4e-57 sp|Q41595|G3PC_TAXBA Glyceraldehyde-3-phosphate dehydrogenase, c... 219 6e-57 sp|P26520|G3PC_PETHY Glyceraldehyde-3-phosphate dehydrogenase, c... 219 6e-57 sp|P34921|G3PC_DIACA Glyceraldehyde-3-phosphate dehydrogenase, c... 219 8e-57 sp|Q43247|G3PE_MAIZE Glyceraldehyde-3-phosphate dehydrogenase, c... 218 2e-56 sp|Q0J8A4|G3PC_ORYSJ Glyceraldehyde-3-phosphate dehydrogenase, c... 216 4e-56 sp|A2YQT7|G3PC_ORYSI Glyceraldehyde-3-phosphate dehydrogenase, c... 216 4e-56 sp|Q42671|G3PC_CRAPL Glyceraldehyde-3-phosphate dehydrogenase, c... 216 5e-56 sp|P34922|G3PC_PEA Glyceraldehyde-3-phosphate dehydrogenase, cyt... 215 9e-56 sp|P26521|G3PC_RANAC Glyceraldehyde-3-phosphate dehydrogenase, c... 214 2e-55 sp|P26517|G3PX_HORVU Glyceraldehyde-3-phosphate dehydrogenase, c... 213 4e-55 sp|Q09054|G3PD_MAIZE Glyceraldehyde-3-phosphate dehydrogenase, c... 213 6e-55 sp|P25861|G3PC_ANTMA Glyceraldehyde-3-phosphate dehydrogenase, c... 213 6e-55 sp|P08735|G3PC_MAIZE Glyceraldehyde-3-phosphate dehydrogenase, c... 211 1e-54 sp|P26519|G3PC_PETCR Glyceraldehyde-3-phosphate dehydrogenase, c... 211 2e-54 sp|P34923|G3PC_PHYPA Glyceraldehyde-3-phosphate dehydrogenase, c... 206 7e-53 sp|P09094|G3PC_TOBAC Glyceraldehyde-3-phosphate dehydrogenase, c... 201 2e-51 sp|Q8X1X3|G3P_PARBR Glyceraldehyde-3-phosphate dehydrogenase OS=... 184 2e-46 sp|Q6CCU7|G3P_YARLI Glyceraldehyde-3-phosphate dehydrogenase OS=... 184 3e-46 sp|Q1DTF9|G3P_COCIM Glyceraldehyde-3-phosphate dehydrogenase OS=... 182 8e-46 sp|Q6BMK0|G3P_DEBHA Glyceraldehyde-3-phosphate dehydrogenase OS=... 181 2e-45 sp|Q8J1H3|G3P_COCPO Glyceraldehyde-3-phosphate dehydrogenase OS=... 181 2e-45 sp|Q9P8C0|G3P_PHANO Glyceraldehyde-3-phosphate dehydrogenase OS=... 179 7e-45 sp|P53430|G3P_MONAN Glyceraldehyde-3-phosphate dehydrogenase OS=... 179 9e-45
>sp|Q39769|G3PC_GINBI Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1 Length = 340
Score = 229 bits (585), Expect = 5e-60 Identities = 109/157 (69%), Positives = 131/157 (83%) Frame = +1
Query: 49 STRKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDG 228 ST KIK+GINGFGRIGRLVARV L RDDIEL+A+NDPF++T +M YM KYDSVHG+ K Sbjct: 3 STGKIKIGINGFGRIGRLVARVALLRDDIELVAVNDPFISTDYMTYMFKYDSVHGQWKKH 62
Query: 229 EVEVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAK 408 EV+V+D+ TL G ++ +G R P EIPW +T VEYVVES+G FTDKEKA+ H+KGGAK Sbjct: 63 EVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAK 122
Query: 409 RVVITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 +VVITAPSKDAPMFV+GVNE +YK +L +VSNASCTT Sbjct: 123 KVVITAPSKDAPMFVVGVNEHEYKPDLAIVSNASCTT 159
>sp|P34783|G3P_ATRNU Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1 Length = 360
Score = 223 bits (569), Expect = 3e-58 Identities = 105/154 (68%), Positives = 127/154 (82%) Frame = +1
Query: 58 KIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEVE 237 K+K+GINGFGRIGRLVARVILQ DD EL+AINDPF+TT +M YM KYDSVHG+ K E++ Sbjct: 3 KVKIGINGFGRIGRLVARVILQSDDCELVAINDPFITTDYMTYMFKYDSVHGQWKHHELK 62
Query: 238 VQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRVV 417 V+D TL G ++ +G R P EIPW QT +YVVES+G FTDK+KA+ HLKGGAK+V+ Sbjct: 63 VKDEKTLLFGERPVTVFGNRNPEEIPWGQTGADYVVESTGVFTDKDKAAAHLKGGAKKVI 122
Query: 418 ITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 I+APSKDAPMFV+GVNE +YK EL +VSNASCTT Sbjct: 123 ISAPSKDAPMFVVGVNEHEYKSELNIVSNASCTT 156
>sp|P25858|G3PC_ARATH Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2 Length = 338
Score = 223 bits (568), Expect = 4e-58 Identities = 100/155 (64%), Positives = 130/155 (83%) Frame = +1
Query: 55 RKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEV 234 +KI++GINGFGRIGRLVARV+LQRDD+EL+A+NDPF+TT +M YM KYDSVHG+ K E+ Sbjct: 4 KKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNEL 63
Query: 235 EVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRV 414 +++D TL G ++ +G R P +IPW++ +YVVES+G FTDK+KA+ HLKGGAK+V Sbjct: 64 KIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKV 123
Query: 415 VITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 VI+APSKDAPMFV+GVNE +YK +L +VSNASCTT Sbjct: 124 VISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTT 158
>sp|P34924|G3PC_PINSY Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1 Length = 340
Score = 222 bits (566), Expect = 7e-58 Identities = 106/157 (67%), Positives = 127/157 (80%) Frame = +1
Query: 49 STRKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDG 228 ST KIK+GINGFGRIGRLVARV L RDDIEL+ +NDPF++T +M+YM KYDSVHGK K Sbjct: 3 STGKIKIGINGFGRIGRLVARVALTRDDIELVGVNDPFISTDYMSYMFKYDSVHGKWKHH 62
Query: 229 EVEVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAK 408 EV V+D+ TL G +++ +G R P EIPW + EYVVES+G FTDKEKAS HLK GAK Sbjct: 63 EVNVKDSKTLLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAK 122
Query: 409 RVVITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 +VVI+APSKDAPMFV+GVNE YK ++ +VSNASCTT Sbjct: 123 KVVISAPSKDAPMFVVGVNEHQYKSDVNIVSNASCTT 159
>sp|P26518|G3PC_MAGLI Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1 Length = 341
Score = 222 bits (566), Expect = 7e-58 Identities = 102/155 (65%), Positives = 129/155 (83%) Frame = +1
Query: 55 RKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEV 234 +KIK+GINGFGRIGRLVARV LQRDD+EL+A+NDPF+TT +M YM KYDSVHG+ K E+ Sbjct: 4 KKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHEL 63
Query: 235 EVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRV 414 +V+D+ TL G ++ +G R P EIPW +T E+VVES+G FTDK+KA+ HLKGGAK+V Sbjct: 64 KVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKV 123
Query: 415 VITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 +I+APSKDAPMFV+GVNE +YK + +VSNASCTT Sbjct: 124 IISAPSKDAPMFVVGVNEHEYKSNIDIVSNASCTT 158
>sp|P04796|G3PC_SINAL Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2 Length = 338
Score = 221 bits (564), Expect = 1e-57 Identities = 101/155 (65%), Positives = 129/155 (83%) Frame = +1
Query: 55 RKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEV 234 +KIK+GINGFGRIGRLVARVILQR+D+EL+A+NDPF+TT +M YM KYDSVHG+ K E+ Sbjct: 4 KKIKIGINGFGRIGRLVARVILQRNDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNEL 63
Query: 235 EVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRV 414 +V+D TL G ++ +G R P +IPW + ++VVES+G FTDK+KA+ HLKGGAK+V Sbjct: 64 KVKDEKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKV 123
Query: 415 VITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 VI+APSKDAPMFV+GVNE +YK +L +VSNASCTT Sbjct: 124 VISAPSKDAPMFVVGVNEHEYKSDLNIVSNASCTT 158
>sp|P17878|G3PC_MESCR Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1 Length = 337
Score = 220 bits (560), Expect = 4e-57 Identities = 102/154 (66%), Positives = 127/154 (82%) Frame = +1
Query: 58 KIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEVE 237 K+KVGINGFGRIGRLVARVILQRDD EL+A+NDPF++T +M YM KYDSVHG+ K E++ Sbjct: 3 KVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIK 62
Query: 238 VQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRVV 417 ++D TL G ++ +G R P EIPW Q ++VVES+G FTDK+KA+ HLKGGAK+VV Sbjct: 63 LKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVV 122
Query: 418 ITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 I+APSKDAPMFV+GVNE +YK +L +VSNASCTT Sbjct: 123 ISAPSKDAPMFVVGVNEHEYKSDLNIVSNASCTT 156
>sp|Q41595|G3PC_TAXBA Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1 Length = 340
Score = 219 bits (558), Expect = 6e-57 Identities = 104/157 (66%), Positives = 127/157 (80%) Frame = +1
Query: 49 STRKIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDG 228 ST KIK+GINGFGRIGRLVARV LQRDDIEL+A+NDPF++T + + KYDSVHG+ K Sbjct: 3 STGKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKH 62
Query: 229 EVEVQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAK 408 EV+V+D TL G ++ +G R P EIPW + EYVVES+G FTDK+KA+ HLKGGAK Sbjct: 63 EVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAK 122
Query: 409 RVVITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 +VVI+APSKDAPMFV+GVNE +YK +L +VSNASCTT Sbjct: 123 KVVISAPSKDAPMFVVGVNEHEYKSDLTIVSNASCTT 159
>sp|P26520|G3PC_PETHY Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1 Length = 337
Score = 219 bits (558), Expect = 6e-57 Identities = 100/154 (64%), Positives = 127/154 (82%) Frame = +1
Query: 58 KIKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEVE 237 KIK+GINGFGRIGRLVARV LQRDD+EL+A+NDPF++ +M YM KYDSVHG+ K E++ Sbjct: 3 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELK 62
Query: 238 VQDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRVV 417 +D+ TL G ++ +G R P EIPW + +YVVES+G FTDK+KA+ HLKGGAK+V+ Sbjct: 63 AKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVI 122
Query: 418 ITAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 I+APSKDAPMFV+GVNE++YK +L VVSNASCTT Sbjct: 123 ISAPSKDAPMFVVGVNEKEYKSDLTVVSNASCTT 156
>sp|P34921|G3PC_DIACA Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1 Length = 338
Score = 219 bits (557), Expect = 8e-57 Identities = 102/153 (66%), Positives = 126/153 (82%) Frame = +1
Query: 61 IKVGINGFGRIGRLVARVILQRDDIELLAINDPFLTTAHMAYMCKYDSVHGKLKDGEVEV 240 IK+GINGFGRIGRLVARVILQR+D EL+A+NDPF+TT +M YM KYDSVHG+ K +++V Sbjct: 4 IKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKV 63
Query: 241 QDNTTLRLGAHTISTYGFREPSEIPWSQTNVEYVVESSGAFTDKEKASGHLKGGAKRVVI 420 +D TL G ++ +G R P EIPW T +YVVES+G FTDK+KA+ HLKGGAK+V+I Sbjct: 64 KDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVII 123
Query: 421 TAPSKDAPMFVMGVNEQDYKEELLVVSNASCTT 519 +APSKDAPMFV+GVNE +YK EL +VSNASCTT Sbjct: 124 SAPSKDAPMFVVGVNEHEYKPELDIVSNASCTT 156
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A3FMH0 |
Definition |
tr|A3FMH0|A3FMH0_BETVU Glyceraldehyde-3-phosphate dehydogenase OS=Beta vulgaris |
Align length |
154 |
Score (bit) |
228.0 |
E-value |
2.0e-58 |
Report |
|