DK955815 |
Clone id |
TST39A01NGRL0024_B17 |
Library |
TST39 |
Length |
561 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_B17. 5' end sequence. |
Accession |
DK955815 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL514Contig1 |
Sequence |
GTCTTTGCAGGTTGTGCTTCCCTTCTGACGTCGTCGTTGCCTCGTCCCTCTTTTGCAGTC TACCAAAAATGGCCAAAATCTCATTCAAGCAGGAGCATGATTTAGATAAGAGAAAGGCGG AAGCTGGCAGAATTCGTGAGAAGTATTTTGATAGAATTCCGGTGATTGTTGAGAAAGCTG AAAGGAGTGATATCCCAGACATCGACAAAAAGAAGTACTTGGTTCCGGCCGATCTGACTG TTGGCCAATTTGTTTATGTAATCCGGAAAAGAATAAAGTTGAATGCAGAGAAAGCAATTT TTATTTTTGTTAATAATGTGCTTCCTCCCACAGCTGCAATCATGTCGGCAATCTATGACG AGCACAAAGATGAAGATGGATTTTTGTATGTCACGTACAGTGGGGAGAACACATTTGGGA GCCAATAGTAGTGTCGAAGGTGTGTTTCTGTAGTTTGCAAAGAGAAGGCAAGAGACACAC GCAGGTTGACTTTTAAAACGTTTGATGCTGTTCTCCTTTTCTTGTGGTGGTGTACAAAAG GTATTTGCTGTCGGTATTTAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8VYK7 |
Definition |
sp|Q8VYK7|ATG8F_ARATH Autophagy-related protein 8f OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
204.0 |
E-value |
3.0e-52 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NX35 |
Definition |
tr|A9NX35|A9NX35_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
119 |
Score (bit) |
218.0 |
E-value |
2.0e-55 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955815|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_B17, 5' (561 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NX35|A9NX35_PICSI Putative uncharacterized protein OS=Picea... 218 2e-55 tr|Q8L5F9|Q8L5F9_CICAR Microtubule associated protein OS=Cicer a... 210 5e-53 tr|A9PID1|A9PID1_POPTR Putative uncharacterized protein OS=Popul... 208 1e-52 tr|A9TDL1|A9TDL1_PHYPA Predicted protein OS=Physcomitrella paten... 208 2e-52 tr|A9RSQ9|A9RSQ9_PHYPA Predicted protein OS=Physcomitrella paten... 208 2e-52 tr|A9NS23|A9NS23_PICSI Putative uncharacterized protein OS=Picea... 207 4e-52 tr|A7P0P2|A7P0P2_VITVI Chromosome chr19 scaffold_4, whole genome... 206 7e-52 tr|A9TDL6|A9TDL6_PHYPA Predicted protein (Fragment) OS=Physcomit... 206 9e-52 tr|A9TDL2|A9TDL2_PHYPA Predicted protein OS=Physcomitrella paten... 206 9e-52 tr|A8JB85|A8JB85_CHLRE Autophagy protein OS=Chlamydomonas reinha... 205 2e-51 tr|A7QY94|A7QY94_VITVI Chromosome chr2 scaffold_241, whole genom... 205 2e-51 tr|Q1WLV8|Q1WLV8_CHLIN Microtubule-associated protein-related pr... 204 2e-51 tr|A7PX30|A7PX30_VITVI Chromosome chr12 scaffold_36, whole genom... 204 2e-51 tr|A9TK80|A9TK80_PHYPA Predicted protein OS=Physcomitrella paten... 204 3e-51 tr|Q6W5F3|Q6W5F3_GOSHI Microtubule-associated protein 1 light ch... 203 5e-51 tr|A7PYB4|A7PYB4_VITVI Chromosome chr15 scaffold_37, whole genom... 203 5e-51 tr|B8BBF8|B8BBF8_ORYSI Putative uncharacterized protein OS=Oryza... 203 6e-51 tr|B7E7M3|B7E7M3_ORYSJ cDNA clone:001-046-G05, full insert seque... 203 6e-51 tr|A9PEE2|A9PEE2_POPTR Putative uncharacterized protein OS=Popul... 202 1e-50 tr|Q01KB9|Q01KB9_ORYSA H0215F08.11 protein OS=Oryza sativa GN=H0... 202 1e-50 tr|B7F704|B7F704_ORYSJ cDNA clone:J023105G11, full insert sequen... 202 1e-50 tr|B6U3J5|B6U3J5_MAIZE Autophagy-related 8d variant 1 OS=Zea may... 201 2e-50 tr|B6SH45|B6SH45_MAIZE Autophagy-related 8e variant 1 OS=Zea may... 201 2e-50 tr|A4RRZ5|A4RRZ5_OSTLU Predicted protein OS=Ostreococcus lucimar... 201 3e-50 tr|B7FH53|B7FH53_MEDTR Putative uncharacterized protein OS=Medic... 199 1e-49 tr|B6SUL0|B6SUL0_MAIZE Autophagy-related 8b variant 1 OS=Zea may... 199 1e-49 tr|Q7XY24|Q7XY24_WHEAT Autophagy OS=Triticum aestivum PE=3 SV=1 197 4e-49 tr|B7E4C9|B7E4C9_ORYSJ cDNA clone:006-210-E03, full insert seque... 196 9e-49 tr|B6SIF1|B6SIF1_MAIZE Autophagy-related 8a variant 1 OS=Zea may... 196 9e-49 tr|A8MS84|A8MS84_ARATH Uncharacterized protein At4g21980.2 OS=Ar... 194 4e-48
>tr|A9NX35|A9NX35_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 128
Score = 218 bits (555), Expect = 2e-55 Identities = 108/119 (90%), Positives = 115/119 (96%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MA+ SFKQEHDL+KRKAEA RIR+KY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ Sbjct: 1 MARSSFKQEHDLEKRKAEAARIRDKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFGSQ 425 FVYVIRKRIKL+AEKAIFIFVNNVLPPTAAIMS+IYDEHKDEDGFLYVTYSGENTFG + Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVNNVLPPTAAIMSSIYDEHKDEDGFLYVTYSGENTFGDE 119
>tr|Q8L5F9|Q8L5F9_CICAR Microtubule associated protein OS=Cicer arietinum GN=map PE=2 SV=1 Length = 121
Score = 210 bits (534), Expect = 5e-53 Identities = 106/117 (90%), Positives = 110/117 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK FKQEHDL+KR+AEA RIREKY DRIPVIVEKAERSDIP IDKKKYLVPADLTVGQ Sbjct: 1 MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL+AEKAIFIFV+NVLPPT AIMSAIYDE KDEDGFLYVTYSGENTFG Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYDEKKDEDGFLYVTYSGENTFG 117
>tr|A9PID1|A9PID1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 122
Score = 208 bits (530), Expect = 1e-52 Identities = 105/119 (88%), Positives = 112/119 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK FKQEH L+KR+AEA RIREKY DRIPVIVEKAERSDIP+IDKKKYLVPADLTVGQ Sbjct: 1 MAKSYFKQEHGLEKRRAEAARIREKYPDRIPVIVEKAERSDIPNIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFGSQ 425 FVYVIRKRIKL+AEKAIFIFV+NVLPPT AIMSAIY++ KDEDGFLYVTYSGENTFGSQ Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEDKKDEDGFLYVTYSGENTFGSQ 119
>tr|A9TDL1|A9TDL1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_193990 PE=3 SV=1 Length = 122
Score = 208 bits (529), Expect = 2e-52 Identities = 102/117 (87%), Positives = 111/117 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK SFKQEH L+KR+AEA RIR+KY DRIPVIVEKAE+SDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MAKSSFKQEHPLEKRQAEASRIRDKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL++EKAIFIFV NVLPPTAA+MS++YDEHKDEDGFLY TYSGENTFG Sbjct: 61 FVYVIRKRIKLSSEKAIFIFVKNVLPPTAAMMSSVYDEHKDEDGFLYFTYSGENTFG 117
>tr|A9RSQ9|A9RSQ9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_205266 PE=3 SV=1 Length = 122
Score = 208 bits (529), Expect = 2e-52 Identities = 103/117 (88%), Positives = 111/117 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK SFKQEH L+KR+AEA RIR+KY DRIPVIVEKAE+SDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MAKNSFKQEHPLEKRQAEAARIRDKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL++EKAIFIFV NVLPPTAA+MS+IYDEHKDEDGFLY TYSGENTFG Sbjct: 61 FVYVIRKRIKLSSEKAIFIFVKNVLPPTAAMMSSIYDEHKDEDGFLYFTYSGENTFG 117
>tr|A9NS23|A9NS23_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 129
Score = 207 bits (526), Expect = 4e-52 Identities = 100/117 (85%), Positives = 112/117 (95%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK +FK+EH L++R+AEAGRIR+KY DRIP IVEKAE+SDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MAKNNFKKEHPLERRQAEAGRIRDKYPDRIPAIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL+AEKAIFIFVNNVLPPTAA+MS++Y+EHKDEDGFLY TYSGENTFG Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVNNVLPPTAALMSSVYEEHKDEDGFLYFTYSGENTFG 117
>tr|A7P0P2|A7P0P2_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027309001 PE=3 SV=1 Length = 119
Score = 206 bits (524), Expect = 7e-52 Identities = 103/118 (87%), Positives = 112/118 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MA+ SFK EH L++R+AEA RIREKY DRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MARSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFGS 422 FVYVIRKRIKL+AEKAIFIFV NVLPPTAA+MSAIY+E+KDEDGFLY+TYSGENTFGS Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGS 118
>tr|A9TDL6|A9TDL6_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_8878 PE=3 SV=1 Length = 117
Score = 206 bits (523), Expect = 9e-52 Identities = 102/117 (87%), Positives = 110/117 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK SFKQEH L+KR+AEA RIR KY DRIPVIVEKAE+SDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MAKSSFKQEHPLEKRQAEASRIRGKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL++EKAIFIFV NVLPPTAA+MS+IYDEHKDEDGF+Y TYSGENTFG Sbjct: 61 FVYVIRKRIKLSSEKAIFIFVKNVLPPTAAMMSSIYDEHKDEDGFVYFTYSGENTFG 117
>tr|A9TDL2|A9TDL2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_169454 PE=3 SV=1 Length = 122
Score = 206 bits (523), Expect = 9e-52 Identities = 102/117 (87%), Positives = 110/117 (94%) Frame = +3
Query: 69 MAKISFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 248 MAK SFKQEH L+KR+AEA RIR KY DRIPVIVEKAE+SDIPDIDKKKYLVPADLTVGQ Sbjct: 1 MAKSSFKQEHHLEKRQAEASRIRGKYPDRIPVIVEKAEKSDIPDIDKKKYLVPADLTVGQ 60
Query: 249 FVYVIRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFG 419 FVYVIRKRIKL++EKAIFIFV NVLPPTAA+MS+IYDEHKDEDGF+Y TYSGENTFG Sbjct: 61 FVYVIRKRIKLSSEKAIFIFVKNVLPPTAAMMSSIYDEHKDEDGFVYFTYSGENTFG 117
>tr|A8JB85|A8JB85_CHLRE Autophagy protein OS=Chlamydomonas reinhardtii GN=APG8 PE=3 SV=1 Length = 134
Score = 205 bits (521), Expect = 2e-51 Identities = 99/114 (86%), Positives = 109/114 (95%) Frame = +3
Query: 81 SFKQEHDLDKRKAEAGRIREKYFDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYV 260 +FKQEH LDKRKAEA RI+EKY DRIPVIVEKAERSDIPDIDKKKYLVP+DLTVGQFVYV Sbjct: 8 TFKQEHSLDKRKAEAARIKEKYPDRIPVIVEKAERSDIPDIDKKKYLVPSDLTVGQFVYV 67
Query: 261 IRKRIKLNAEKAIFIFVNNVLPPTAAIMSAIYDEHKDEDGFLYVTYSGENTFGS 422 IRKRIKL+ EKAIFIFV NVLPPTAA+MS+IY++HKDEDGFLY+TYSGENTFG+ Sbjct: 68 IRKRIKLSPEKAIFIFVKNVLPPTAALMSSIYEDHKDEDGFLYITYSGENTFGA 121
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