DK955822 [AcEST]

DK955822
Clone id	TST39A01NGRL0024_B24
Library	TST39
Length	554
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_B24. 5' end sequence.
Accession	DK955822
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	CL809Contig1
Sequence	GTAAATTGAACCCCAAAGATTGGTGAAATATTCAGTCATTGAATCTATGTGCAGGATTCA AGATATGGCTGGCATATTAAAACAAAGAGAGAGAAAGAAAGTGGCATGAGCCCTTAAAGA ATGGATCCATTTACACACTAAAGAACGGCATATGAAATTTGTACACTTGTCTCCCTTCTT CTCCAAGGCATGTTTCAGTATGCCAAAAAGGGCAATGGGCGTGAAAAGTCACCATTAGGA GAGTTTATATTCGAGTCTTGTGAAAGATGGGGGAGGATTGGCAGAACCAGGTAGGCTCTG GGCCTCTGGCTGTGAGAGGAGTTAAGCTAGAGTAATTAAGAGTGTAAGACACCCTTTCAC TGAGCAAGAATGATCGGCACAAGGCATGCTTGGATTGTACAAGTACATTGCATACTAGTA ATTTGAATAATGGACGAAGATGGATAGAGTTCAATCAAAGGATATAATGCGGTCAATATG CGGGATAATGTAGTCAATCTATGGACATATGTTTTGTCCTCTCACTGGGACTTACTGAGT GTGGGCATTACTCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q8VD00
Definition	sp\|Q8VD00\|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus
Align length	33
Score (bit)	33.5
E-value	0.71
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955822\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_B24, 5' (554 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q8VD00\|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus G... 33 0.71 sp\|Q5U3Y7\|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicu... 32 1.6 >sp\|Q8VD00\|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus GN=Tmem97 PE=2 SV=1 Length = 176 Score = 33.5 bits (75), Expect = 0.71 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -2 Query: 157 FHMPFFSVMDPFFKGSCHFLSLSLFYASHIL 59 F +PFF + FFKGSC ++ + YA+H + Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAAHTI 108 >sp\|Q5U3Y7\|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicus GN=Tmem97 PE=2 SV=1 Length = 176 Score = 32.3 bits (72), Expect = 1.6 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -2 Query: 157 FHMPFFSVMDPFFKGSCHFLSLSLFYASHIL 59 F +PFF + FFKGSC ++ + YA H + Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAVHTI 108
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B1ZUP9
Definition	tr\|B1ZUP9\|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM 11246 / PB90-1)
Align length	81
Score (bit)	34.3
E-value	4.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955822\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_B24, 5' (554 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B1ZUP9\|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain ... 34 4.6 >tr\|B1ZUP9\|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=Oter_1649 PE=4 SV=1 Length = 852 Score = 34.3 bits (77), Expect = 4.6 Identities = 26/81 (32%), Positives = 34/81 (41%) Frame = -2 Query: 427 FKLLVCNVLVQSKHALCRSFLLSERVSYTLNYSSLTPLTARGPEPTWFCQSSPIFHKTRI 248 F L V N L +++ L R L SY LN++ L L R P P WF Sbjct: 662 FSLNVANPL-SAEYFLHRYGLERVTASYDLNFTQLEALLLRAP-PAWFD----------- 708 Query: 247 *TLLMVTFHAHCPFWHTETCL 185 +T H H P +H E C+ Sbjct: 709 -----LTIHQHMPMFHMEHCV 724