DK955822
Clone id TST39A01NGRL0024_B24
Library
Length 554
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_B24. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GTAAATTGAACCCCAAAGATTGGTGAAATATTCAGTCATTGAATCTATGTGCAGGATTCA
AGATATGGCTGGCATATTAAAACAAAGAGAGAGAAAGAAAGTGGCATGAGCCCTTAAAGA
ATGGATCCATTTACACACTAAAGAACGGCATATGAAATTTGTACACTTGTCTCCCTTCTT
CTCCAAGGCATGTTTCAGTATGCCAAAAAGGGCAATGGGCGTGAAAAGTCACCATTAGGA
GAGTTTATATTCGAGTCTTGTGAAAGATGGGGGAGGATTGGCAGAACCAGGTAGGCTCTG
GGCCTCTGGCTGTGAGAGGAGTTAAGCTAGAGTAATTAAGAGTGTAAGACACCCTTTCAC
TGAGCAAGAATGATCGGCACAAGGCATGCTTGGATTGTACAAGTACATTGCATACTAGTA
ATTTGAATAATGGACGAAGATGGATAGAGTTCAATCAAAGGATATAATGCGGTCAATATG
CGGGATAATGTAGTCAATCTATGGACATATGTTTTGTCCTCTCACTGGGACTTACTGAGT
GTGGGCATTACTCT
■■Homology search results ■■ -
sp_hit_id Q8VD00
Definition sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus
Align length 33
Score (bit) 33.5
E-value 0.71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955822|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_B24, 5'
(554 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus G... 33 0.71
sp|Q5U3Y7|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicu... 32 1.6

>sp|Q8VD00|TMM97_MOUSE Transmembrane protein 97 OS=Mus musculus
GN=Tmem97 PE=2 SV=1
Length = 176

Score = 33.5 bits (75), Expect = 0.71
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2

Query: 157 FHMPFFSV*MDPFFKGSCHFLSLSLF*YASHIL 59
F +PFF + FFKGSC ++ + YA+H +
Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAAHTI 108


>sp|Q5U3Y7|TMM97_RAT Transmembrane protein 97 OS=Rattus norvegicus
GN=Tmem97 PE=2 SV=1
Length = 176

Score = 32.3 bits (72), Expect = 1.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2

Query: 157 FHMPFFSV*MDPFFKGSCHFLSLSLF*YASHIL 59
F +PFF + FFKGSC ++ + YA H +
Sbjct: 76 FQLPFFPIAAYAFFKGSCRWIRIPAIIYAVHTI 108


tr_hit_id B1ZUP9
Definition tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM 11246 / PB90-1)
Align length 81
Score (bit) 34.3
E-value 4.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955822|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_B24, 5'
(554 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain ... 34 4.6

>tr|B1ZUP9|B1ZUP9_OPITP Peptidase U32 OS=Opitutus terrae (strain DSM
11246 / PB90-1) GN=Oter_1649 PE=4 SV=1
Length = 852

Score = 34.3 bits (77), Expect = 4.6
Identities = 26/81 (32%), Positives = 34/81 (41%)
Frame = -2

Query: 427 FKLLVCNVLVQSKHALCRSFLLSERVSYTLNYSSLTPLTARGPEPTWFCQSSPIFHKTRI 248
F L V N L +++ L R L SY LN++ L L R P P WF
Sbjct: 662 FSLNVANPL-SAEYFLHRYGLERVTASYDLNFTQLEALLLRAP-PAWFD----------- 708

Query: 247 *TLLMVTFHAHCPFWHTETCL 185
+T H H P +H E C+
Sbjct: 709 -----LTIHQHMPMFHMEHCV 724