DK955829 |
Clone id |
TST39A01NGRL0024_C07 |
Library |
TST39 |
Length |
548 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_C07. 5' end sequence. |
Accession |
DK955829 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1498Contig1 |
Sequence |
CAAGGATTTAAAGTGATGGCAACGAGGAGTTTGAGCCAGATCTGACAGTGCCGCATTGTT TGATTTGCGGCCGGCCGCGACTGTTTTCTCCATCTTCGTCCTGCAGCGGCTTCTTCCTTT CCAGACTCCAGGGTTCAGTATGGGGCAGACTCTTGGGTGCATGCAAGTGGATCAGTCAAC TGTAGCCATAAAAGAAAACTTTGGGAAGTTTGATCATGTTTTGGAGCCTGGTTGTCATTG TGTACCCTGGTGCCTTGGAAGTTATGTTGTTGGAGTATTATCAATGCGTGTGCAGCAATT AGATGTTCGATGTGAGACAAAAACAAAGGACAATGTATTTGTGAATGTTGTGGCATCTGT ACAATATAGAGCTATTCAAACTAATGCTAAGGATGCCTTCTACAAGCTCACAAATCCTCG CGAACAGATACAGTCTTATGTGTTTGATGTGGTGAGGGCTACTGTGCCAAAGATGAACTT GGATGATGTCTTTGAGCAAAAAAAGTGAGGTTGGAAAGGCGGTTGCTGATGAACTGGAAA AGGCCATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0ABC7 |
Definition |
sp|P0ABC7|HFLK_ECOLI Protein hflK OS=Escherichia coli (strain K12) |
Align length |
115 |
Score (bit) |
45.8 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q94JS7 |
Definition |
tr|Q94JS7|Q94JS7_ORYSA Hypersensitive-induced response protein OS=Oryza sativa |
Align length |
121 |
Score (bit) |
203.0 |
E-value |
5.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955829|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_C07, 5' (548 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q94JS7|Q94JS7_ORYSA Hypersensitive-induced response protein O... 203 5e-53 tr|Q6ZIV7|Q6ZIV7_ORYSJ Os08g0398400 protein OS=Oryza sativa subs... 203 5e-53 tr|A2YUZ2|A2YUZ2_ORYSI Putative uncharacterized protein OS=Oryza... 203 5e-53 tr|A5HE90|A5HE90_WHEAT Hypersensitive response protein OS=Tritic... 204 8e-53 tr|Q8H1V3|Q8H1V3_HORVD Hypersensitive-induced reaction protein 1... 204 2e-52 tr|Q9M584|Q9M584_MAIZE Putative uncharacterized protein OS=Zea m... 203 2e-52 tr|Q9FS40|Q9FS40_MAIZE Putative membrane protein OS=Zea mays GN=... 203 2e-52 tr|A7QI49|A7QI49_VITVI Chromosome chr17 scaffold_101, whole geno... 202 3e-52 tr|B6SUV6|B6SUV6_MAIZE Hypersensitive-induced response protein O... 201 7e-52 tr|Q6K550|Q6K550_ORYSJ Putative hypersensitive-induced response ... 200 1e-51 tr|B8BET0|B8BET0_ORYSI Putative uncharacterized protein OS=Oryza... 200 1e-51 tr|Q6UNT3|Q6UNT3_CUCSA Hypersensitive-induced response protein O... 199 2e-51 tr|B7FKU0|B7FKU0_MEDTR Putative uncharacterized protein OS=Medic... 201 2e-51 tr|Q9CAR7|Q9CAR7_ARATH Putative uncharacterized protein T17F3.13... 202 6e-51 tr|Q9M583|Q9M583_MAIZE Hypersensitive-induced response protein O... 198 6e-51 tr|A6YGE4|A6YGE4_CARPA Hypersensitive-induced response protein O... 195 2e-50 tr|Q9ZRU2|Q9ZRU2_CICAR Putative uncharacterized protein OS=Cicer... 195 4e-50 tr|Q5KSB6|Q5KSB6_LOTJA Hypersensitive-induced response protein O... 193 2e-49 tr|A7Q2S1|A7Q2S1_VITVI Chromosome chr1 scaffold_46, whole genome... 193 2e-49 tr|Q9FM19|Q9FM19_ARATH Hypersensitive-induced response protein O... 193 4e-49 tr|B7FKT5|B7FKT5_MEDTR Putative uncharacterized protein OS=Medic... 192 4e-49 tr|Q0J2C0|Q0J2C0_ORYSJ Os09g0361200 protein OS=Oryza sativa subs... 191 5e-49 tr|A9RQZ3|A9RQZ3_PHYPA Predicted protein OS=Physcomitrella paten... 196 7e-49 tr|A9PK28|A9PK28_POPJC Putative uncharacterized protein OS=Popul... 192 9e-49 tr|Q5GI04|Q5GI04_CAPAN Hypersensitive-induced reaction protein O... 191 1e-48 tr|Q6L4S3|Q6L4S3_ORYSJ Os05g0591900 protein OS=Oryza sativa subs... 189 2e-48 tr|A2Y840|A2Y840_ORYSI Putative uncharacterized protein OS=Oryza... 189 2e-48 tr|A9PFA2|A9PFA2_POPTR Putative uncharacterized protein OS=Popul... 191 2e-48 tr|B7FHU7|B7FHU7_MEDTR Putative uncharacterized protein OS=Medic... 188 6e-48 tr|Q9M582|Q9M582_MAIZE Putative uncharacterized protein OS=Zea m... 188 1e-47
>tr|Q94JS7|Q94JS7_ORYSA Hypersensitive-induced response protein OS=Oryza sativa GN=RHIR1 PE=2 SV=1 Length = 284
Score = 203 bits (517), Expect(2) = 5e-53 Identities = 96/121 (79%), Positives = 107/121 (88%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE+FGKFD VLEPGCH +PWC+G + G LS+RVQQLDVRCET Sbjct: 1 MGQALGLVQVDQSTVAIKESFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALAEKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 28.5 bits (62), Expect(2) = 5e-53 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV DELEKAM Sbjct: 117 AFEQKNEIAKAVEDELEKAM 136
>tr|Q6ZIV7|Q6ZIV7_ORYSJ Os08g0398400 protein OS=Oryza sativa subsp. japonica GN=OJ1198_B10.17 PE=2 SV=1 Length = 284
Score = 203 bits (517), Expect(2) = 5e-53 Identities = 96/121 (79%), Positives = 107/121 (88%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE+FGKFD VLEPGCH +PWC+G + G LS+RVQQLDVRCET Sbjct: 1 MGQALGLVQVDQSTVAIKESFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALAEKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 28.5 bits (62), Expect(2) = 5e-53 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV DELEKAM Sbjct: 117 AFEQKNEIAKAVEDELEKAM 136
>tr|A2YUZ2|A2YUZ2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29142 PE=4 SV=1 Length = 284
Score = 203 bits (517), Expect(2) = 5e-53 Identities = 96/121 (79%), Positives = 107/121 (88%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE+FGKFD VLEPGCH +PWC+G + G LS+RVQQLDVRCET Sbjct: 1 MGQALGLVQVDQSTVAIKESFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALAEKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 28.5 bits (62), Expect(2) = 5e-53 Identities = 12/20 (60%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV DELEKAM Sbjct: 117 AFEQKNEIAKAVEDELEKAM 136
>tr|A5HE90|A5HE90_WHEAT Hypersensitive response protein OS=Triticum aestivum GN=hir1 PE=2 SV=1 Length = 284
Score = 204 bits (519), Expect(2) = 8e-53 Identities = 95/121 (78%), Positives = 107/121 (88%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MG LG +Q+DQSTVAIKE FGKFD +L+PGCHC+PWCLG + G LS+RVQQLDVRCET Sbjct: 1 MGGVLGLIQIDQSTVAIKETFGKFDAILQPGCHCLPWCLGQQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDDVFEQ Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDVFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 26.9 bits (58), Expect(2) = 8e-53 Identities = 11/17 (64%), Positives = 15/17 (88%) Frame = +3
Query: 498 KKSEVGKAVADELEKAM 548 +K+E+ +AV DELEKAM Sbjct: 120 QKNEIARAVEDELEKAM 136
>tr|Q8H1V3|Q8H1V3_HORVD Hypersensitive-induced reaction protein 1 OS=Hordeum vulgare var. distichum GN=hir1 PE=2 SV=1 Length = 284
Score = 204 bits (520), Expect(2) = 2e-52 Identities = 96/121 (79%), Positives = 107/121 (88%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MG LG +Q+DQSTVAIKE FGKFD +L+PGCHC+PWCLG V G LS+RVQQLDVRCET Sbjct: 1 MGGVLGLIQIDQSTVAIKETFGKFDAILQPGCHCLPWCLGQQVAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDDVFEQ Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDVFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 25.4 bits (54), Expect(2) = 2e-52 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +3
Query: 498 KKSEVGKAVADELEKAM 548 +K+E+ +AV +ELEKAM Sbjct: 120 QKNEIARAVEEELEKAM 136
>tr|Q9M584|Q9M584_MAIZE Putative uncharacterized protein OS=Zea mays GN=HIR1 PE=2 SV=1 Length = 284
Score = 203 bits (516), Expect(2) = 2e-52 Identities = 96/121 (79%), Positives = 106/121 (87%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE FGKFD VLEPGCH +PWC+G + G LS+RVQQLDVRCET Sbjct: 1 MGQALGLIQVDQSTVAIKETFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 26.6 bits (57), Expect(2) = 2e-52 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV +ELEKAM Sbjct: 117 AFEQKNEIAKAVENELEKAM 136
>tr|Q9FS40|Q9FS40_MAIZE Putative membrane protein OS=Zea mays GN=hdr10 PE=2 SV=1 Length = 284
Score = 203 bits (516), Expect(2) = 2e-52 Identities = 96/121 (79%), Positives = 106/121 (87%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE FGKFD VLEPGCH +PWC+G + G LS+RVQQLDVRCET Sbjct: 1 MGQALGLIQVDQSTVAIKETFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 26.6 bits (57), Expect(2) = 2e-52 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV +ELEKAM Sbjct: 117 AFEQKNEIAKAVENELEKAM 136
>tr|A7QI49|A7QI49_VITVI Chromosome chr17 scaffold_101, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000093001 PE=4 SV=1 Length = 286
Score = 202 bits (513), Expect(2) = 3e-52 Identities = 93/121 (76%), Positives = 106/121 (87%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MG LGC+QVDQSTVAIKE FGKF+ VLEPGCHC+PWC GS + G LS+R+QQLDVRCET Sbjct: 1 MGNLLGCIQVDQSTVAIKERFGKFEEVLEPGCHCLPWCFGSQLAGHLSLRLQQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVAS+QYRA+ A DAFYKL+N R QIQ+YVFDV+RA+VPK+NLDD FEQ Sbjct: 61 KTKDNVFVNVVASIQYRALADKANDAFYKLSNTRSQIQAYVFDVIRASVPKLNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 27.3 bits (59), Expect(2) = 3e-52 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ K+V DELEKAM Sbjct: 117 AFEQKNEIAKSVEDELEKAM 136
>tr|B6SUV6|B6SUV6_MAIZE Hypersensitive-induced response protein OS=Zea mays PE=2 SV=1 Length = 284
Score = 201 bits (512), Expect(2) = 7e-52 Identities = 95/121 (78%), Positives = 106/121 (87%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +QVDQSTVAIKE FGKFD VLEPGCH +PWC+G + G LS+RVQ+LDVRCET Sbjct: 1 MGQALGLIQVDQSTVAIKETFGKFDEVLEPGCHFLPWCIGKQIAGYLSLRVQRLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFVNVVASVQYRA+ A DAFY+L+N REQIQSYVFDV+RA+VPKMNLDD FEQ Sbjct: 61 KTKDNVFVNVVASVQYRALADKASDAFYRLSNTREQIQSYVFDVIRASVPKMNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 26.6 bits (57), Expect(2) = 7e-52 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+E+ KAV +ELEKAM Sbjct: 117 AFEQKNEIAKAVENELEKAM 136
>tr|Q6K550|Q6K550_ORYSJ Putative hypersensitive-induced response protein OS=Oryza sativa subsp. japonica GN=P0711F01.54 PE=4 SV=1 Length = 287
Score = 200 bits (508), Expect(2) = 1e-51 Identities = 94/121 (77%), Positives = 105/121 (86%) Frame = +2
Query: 140 MGQTLGCMQVDQSTVAIKENFGKFDHVLEPGCHCVPWCLGSYVVGVLSMRVQQLDVRCET 319 MGQ LG +Q+DQSTVAIKENFGKF VLEPGCH +PWC+G + G LS+RV+QLDVRCET Sbjct: 1 MGQCLGLVQIDQSTVAIKENFGKFSEVLEPGCHFLPWCIGQQIAGYLSLRVKQLDVRCET 60
Query: 320 KTKDNVFVNVVASVQYRAIQTNAKDAFYKLTNPREQIQSYVFDVVRATVPKMNLDDVFEQ 499 KTKDNVFV VVASVQYRA+ A DAFYKL+N REQIQSYVFDV+RATVPK+NLDD FEQ Sbjct: 61 KTKDNVFVTVVASVQYRALADKASDAFYKLSNTREQIQSYVFDVIRATVPKLNLDDAFEQ 120
Query: 500 K 502 K Sbjct: 121 K 121
Score = 27.3 bits (59), Expect(2) = 1e-51 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3
Query: 489 SLSKKSEVGKAVADELEKAM 548 + +K+++ KAV DELEKAM Sbjct: 117 AFEQKNDIAKAVEDELEKAM 136
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