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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955834
Clone id TST39A01NGRL0024_C12
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_C12. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GCTACTCGCACGCCACTCTCGGCACAACCCATTCAGTTTTCAGCTCATATAACTCCAATT
TCCTCAAGAGCTCTTCATTGAAGCTCGACACAATCCGTGGGTCTGGATCAACCTTACTAG
CGTGTGTCTATGGAAACCGTGAAAAGCTTGCACATATACCACATAACTTCCTCTCTCATT
GATACCTCTCTAGGCGCCCTCATCGACGTGGTCCTTCATGTGAAGCTTGTGCACACGCTG
ACGTTGAAACTGCCCCCCGGACCAATCCCGTGGGCTATTGTTAGAAACTGGATCCCATTC
GAATAATGCCTCAACCCTCGGAATCAACCCGAGCATGCCAAGCACTATGGCGATGTATGC
CTGCTTCAAATGGGCCAACACAAG
■■Homology search results ■■ -
sp_hit_id P92994
Definition sp|P92994|TCMO_ARATH Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana
Align length 42
Score (bit) 46.6
E-value 4.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955834|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C12, 5'
         (384 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P92994|TCMO_ARATH Trans-cinnamate 4-monooxygenase OS=Arabidop...    47   4e-05
sp|Q96423|TCMO_GLYEC Trans-cinnamate 4-monooxygenase OS=Glycyrrh...    46   5e-05
sp|Q43033|TCMO_PETCR Trans-cinnamate 4-monooxygenase OS=Petrosel...    46   7e-05
sp|O81928|TCMO_CICAR Trans-cinnamate 4-monooxygenase OS=Cicer ar...    46   7e-05
sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase OS=Catharan...    46   7e-05
sp|P37115|TCMO_PHAAU Trans-cinnamate 4-monooxygenase OS=Phaseolu...    45   9e-05
sp|Q42797|TCMO_SOYBN Trans-cinnamate 4-monooxygenase OS=Glycine ...    45   1e-04
sp|O24312|TCMO_POPTM Trans-cinnamate 4-monooxygenase OS=Populus ...    45   1e-04
sp|Q04468|TCMO_HELTU Trans-cinnamate 4-monooxygenase OS=Helianth...    45   1e-04
sp|Q43054|TCMO_POPKI Trans-cinnamate 4-monooxygenase OS=Populus ...    45   1e-04
sp|Q43240|TCMO_ZINEL Trans-cinnamate 4-monooxygenase OS=Zinnia e...    44   3e-04
sp|P37114|TCMO_MEDSA Trans-cinnamate 4-monooxygenase OS=Medicago...    44   3e-04
sp|P12938|CP2D3_RAT Cytochrome P450 2D3 OS=Rattus norvegicus GN=...    41   0.002
sp|Q9AR74|TCMO_RUTGR Trans-cinnamate 4-monooxygenase OS=Ruta gra...    39   0.006
sp|Q43067|TCMO_PEA Trans-cinnamate 4-monooxygenase OS=Pisum sati...    38   0.018
sp|P12939|CP2DA_RAT Cytochrome P450 2D10 OS=Rattus norvegicus GN...    37   0.040
sp|P24456|CP2DA_MOUSE Cytochrome P450 2D10 OS=Mus musculus GN=Cy...    35   0.090
sp|P10633|CP2D1_RAT Cytochrome P450 2D1 OS=Rattus norvegicus GN=...    33   0.34 
sp|Q6A085|ZN629_MOUSE Zinc finger protein 629 OS=Mus musculus GN...    33   0.43 
sp|P24457|CP2DB_MOUSE Cytochrome P450 2D11 OS=Mus musculus GN=Cy...    33   0.45 
sp|P11714|CP2D9_MOUSE Cytochrome P450 2D9 OS=Mus musculus GN=Cyp...    33   0.45 
sp|Q42600|C84A1_ARATH Cytochrome P450 84A1 OS=Arabidopsis thalia...    33   0.58 
sp|O64900|C80B2_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isoz...    32   1.00 
sp|O64899|C80B1_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isoz...    32   1.00 
sp|Q9LW27|C71BF_ARATH Cytochrome P450 71B15 OS=Arabidopsis thali...    30   2.9  
sp|Q9UEG4|ZN629_HUMAN Zinc finger protein 629 OS=Homo sapiens GN...    30   4.8  
sp|Q5JI02|Y853_PYRKO UPF0284 protein TK0853 OS=Pyrococcus kodaka...    29   6.3  
sp|Q9MZY0|CP2E1_CANFA Cytochrome P450 2E1 OS=Canis familiaris GN...    29   6.5  
sp|O18963|CP2E1_BOVIN Cytochrome P450 2E1 OS=Bos taurus GN=CYP2E...    29   6.5  
sp|Q50EK4|C75A1_PINTA Cytochrome P450 750A1 OS=Pinus taeda GN=CY...    29   6.5  

>sp|P92994|TCMO_ARATH Trans-cinnamate 4-monooxygenase OS=Arabidopsis
           thaliana GN=CYP73A5 PE=2 SV=1
          Length = 505

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  ++AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPIPIFGNWLQVGDDLNHRNLVDYAKKFGDLFLLRMGQ 75


>sp|Q96423|TCMO_GLYEC Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza
           echinata GN=CYP73A14 PE=2 SV=1
          Length = 505

 Score = 46.2 bits (108), Expect = 5e-05
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQ 75


>sp|Q43033|TCMO_PETCR Trans-cinnamate 4-monooxygenase
           OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1
          Length = 506

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  ++AK +GD+ +L+MGQ
Sbjct: 35  PPGPIPVPVFGNWLQVGDDLNQRNLVDYAKKFGDLFMLRMGQ 76


>sp|O81928|TCMO_CICAR Trans-cinnamate 4-monooxygenase OS=Cicer
           arietinum GN=CYP73A19 PE=2 SV=2
          Length = 505

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQ 75


>sp|P48522|TCMO_CATRO Trans-cinnamate 4-monooxygenase
           OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1
          Length = 505

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  ++AK +G++ LL+MGQ
Sbjct: 34  PPGPIPVPVFGNWLQVGDDLNHRNLSDYAKKFGEIFLLRMGQ 75


>sp|P37115|TCMO_PHAAU Trans-cinnamate 4-monooxygenase OS=Phaseolus
           aureus GN=CYP73A2 PE=1 SV=1
          Length = 505

 Score = 45.4 bits (106), Expect = 9e-05
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  I  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPLPVPIFGNWLQVGDDLNHRNLTQLAKRFGDIFLLRMGQ 75


>sp|Q42797|TCMO_SOYBN Trans-cinnamate 4-monooxygenase OS=Glycine max
           GN=CYP73A11 PE=2 SV=1
          Length = 506

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  I  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPLPVPIFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQ 75


>sp|O24312|TCMO_POPTM Trans-cinnamate 4-monooxygenase OS=Populus
           tremuloides GN=CYP73A13 PE=2 SV=1
          Length = 505

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  +  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQ 75


>sp|Q04468|TCMO_HELTU Trans-cinnamate 4-monooxygenase OS=Helianthus
           tuberosus GN=CYP73A1 PE=1 SV=1
          Length = 505

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  + AK +G++ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTDLAKRFGEILLLRMGQ 75


>sp|Q43054|TCMO_POPKI Trans-cinnamate 4-monooxygenase OS=Populus
           kitakamiensis GN=CYP73A16 PE=2 SV=1
          Length = 505

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  +  NW+     LN RN  + AK +GD+ LL+MGQ
Sbjct: 34  PPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQ 75
tr_hit_id Q2LAD8
Definition tr|Q2LAD8|Q2LAD8_SOLTU Cinnamic acid 4-hydroxylase OS=Solanum tuberosum
Align length 42
Score (bit) 48.9
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955834|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C12, 5'
         (384 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2LAD8|Q2LAD8_SOLTU Cinnamic acid 4-hydroxylase OS=Solanum tu...    49   1e-04
tr|A3FIN3|A3FIN3_SALMI Cinnamate 4-hydroxylase OS=Salvia miltior...    48   2e-04
tr|Q84TQ4|Q84TQ4_9APIA Cinnamate 4-hydroxylase OS=Ammi majus PE=...    48   3e-04
tr|Q66R00|Q66R00_AGARU Cinnamic acid 4-hydroxylase OS=Agastache ...    48   3e-04
tr|Q9FQY6|Q9FQY6_CAPAN Cinnamic acid 4-hydroxylase OS=Capsicum a...    47   4e-04
tr|Q948S8|Q948S8_LITER Cinnamic acid 4-hydroxylase OS=Lithosperm...    47   4e-04
tr|Q0QDS3|Q0QDS3_9BORA Cinnamic acid 4-hydroxylase OS=Arnebia eu...    47   4e-04
tr|B5LAX7|B5LAX7_CAPAN Candidate cinnamic acid 4-hydroxylase OS=...    47   4e-04
tr|Q9LKX1|Q9LKX1_CITSI Cinnamate 4-hydroxylase CYP73 OS=Citrus s...    47   5e-04
tr|Q94JM5|Q94JM5_CITPA Cinnamate 4-hydroxylase OS=Citrus paradis...    47   5e-04
tr|Q2PF21|Q2PF21_VERHY Cinnamic acid 4-hydroxylase OS=Verbena hy...    47   5e-04
tr|Q9T0N4|Q9T0N4_ARATH Cinnamate 4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|Q9SB21|Q9SB21_ARATH Trans-ciinamate 4-hydroxylase (Fragment) ...    47   6e-04
tr|B1GV55|B1GV55_ARATH Cinnamate-4-hydroxylase (Fragment) OS=Ara...    47   6e-04
tr|B1GV49|B1GV49_ARATH Cinnamate-4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|B1GV39|B1GV39_ARATH Cinnamate-4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|B1GV38|B1GV38_ARATH Cinnamate-4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|B1GV37|B1GV37_ARATH Cinnamate-4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|B1GV36|B1GV36_ARATH Cinnamate-4-hydroxylase OS=Arabidopsis th...    47   6e-04
tr|A5GZU7|A5GZU7_BRANA Cinnamate 4-hydroxylase isoform 2 OS=Bras...    47   6e-04
tr|A1XEL3|A1XEL3_TOBAC CYP73A47v2 OS=Nicotiana tabacum PE=2 SV=1       47   6e-04
tr|A1XEL1|A1XEL1_TOBAC CYP73A47v1 OS=Nicotiana tabacum PE=2 SV=1       47   6e-04
tr|A0AAK8|A0AAK8_COFAR Trans-cinnamate 4-monooxygenase (Fragment...    47   6e-04
tr|Q2MJ09|Q2MJ09_MEDTR Cytochrome P450 monooxygenase CYP73A3 OS=...    46   0.001
tr|Q9AXP9|Q9AXP9_POPJC Cinnamate 4-hydroxylase OS=Populus jackii...    45   0.001
tr|Q6QHK2|Q6QHK2_ALLCE Cinammate 4-hydroxylase OS=Allium cepa PE...    45   0.001
tr|B2Z6P6|B2Z6P6_POPTR Trans-cinnamate 4-hydroxylase OS=Populus ...    45   0.001
tr|A9T5I0|A9T5I0_PHYPA Predicted protein OS=Physcomitrella paten...    45   0.001
tr|A9PBZ7|A9PBZ7_POPTR Putative uncharacterized protein OS=Popul...    45   0.001
tr|A8CF55|A8CF55_BRACM Cinnamate-4-hydroxylase OS=Brassica campe...    45   0.001

>tr|Q2LAD8|Q2LAD8_SOLTU Cinnamic acid 4-hydroxylase OS=Solanum
           tuberosum PE=3 SV=1
          Length = 505

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 23/42 (54%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  E+AK +GDV LL+MGQ
Sbjct: 34  PPGPIPVPVFGNWLQVGDDLNHRNLTEYAKKFGDVFLLRMGQ 75


>tr|A3FIN3|A3FIN3_SALMI Cinnamate 4-hydroxylase OS=Salvia
           miltiorrhiza PE=3 SV=1
          Length = 504

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  ++AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTDYAKRFGDIFLLRMGQ 75


>tr|Q84TQ4|Q84TQ4_9APIA Cinnamate 4-hydroxylase OS=Ammi majus PE=2
           SV=1
          Length = 506

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  E+AK +GD+ LL+MGQ
Sbjct: 35  PPGPIPVPVFGNWLQVGDDLNQRNLVEYAKKFGDLFLLRMGQ 76


>tr|Q66R00|Q66R00_AGARU Cinnamic acid 4-hydroxylase OS=Agastache
           rugosa GN=C4H PE=2 SV=1
          Length = 502

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  ++AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTDYAKKFGDIFLLRMGQ 75


>tr|Q9FQY6|Q9FQY6_CAPAN Cinnamic acid 4-hydroxylase OS=Capsicum
           annuum GN=C4H PE=2 SV=1
          Length = 505

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  ++AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPVFGNWLQVGDDLNHRNLTDYAKKFGDIFLLRMGQ 75


>tr|Q948S8|Q948S8_LITER Cinnamic acid 4-hydroxylase OS=Lithospermum
           erythrorhizon GN=C4H-1 PE=2 SV=1
          Length = 505

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  E+AK +G++ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTEYAKKFGEIFLLRMGQ 75


>tr|Q0QDS3|Q0QDS3_9BORA Cinnamic acid 4-hydroxylase OS=Arnebia
           euchroma PE=2 SV=2
          Length = 504

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  I  NW+     LN RN  E+AK +G++ LL+MGQ
Sbjct: 34  PPGPIPVPIFGNWLQVGDDLNHRNLTEYAKKFGEIFLLRMGQ 75


>tr|B5LAX7|B5LAX7_CAPAN Candidate cinnamic acid 4-hydroxylase
           OS=Capsicum annuum PE=2 SV=1
          Length = 505

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGPIP  +  NW+     LN RN  ++AK +GD+ LL+MGQ
Sbjct: 34  PPGPIPVPVFGNWLQVGDDLNHRNLTDYAKKFGDIFLLRMGQ 75


>tr|Q9LKX1|Q9LKX1_CITSI Cinnamate 4-hydroxylase CYP73 OS=Citrus
           sinensis GN=C4H2 PE=2 SV=1
          Length = 519

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  +  NW+     LN RN  + AK YGDV LL+MGQ
Sbjct: 48  PPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQ 89


>tr|Q94JM5|Q94JM5_CITPA Cinnamate 4-hydroxylase OS=Citrus paradisi
           PE=2 SV=1
          Length = 505

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +1

Query: 253 PPGPIPWAIVRNWIPFE*CLNPRNQPEHAKHYGDVCLLQMGQ 378
           PPGP+P  +  NW+     LN RN  + AK YGDV LL+MGQ
Sbjct: 34  PPGPLPVPVFGNWLQVGDDLNHRNLSDLAKKYGDVLLLRMGQ 75