DK955835
Clone id TST39A01NGRL0024_C13
Library
Length 578
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_C13. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
CGCGGCCTCCACGCCTTTTACATCACAAAGTCTGCTCTCTCTCTCTCTCTCTCTCAGACC
AACACACACACACACACACAGTACACACACGCGCATGCACTCCCAAAATTTCGACACAGT
AATCACTCCAACCTCATCGATCCATTCTGCTAATCACACAAAATCGCCCATAATTGGTCG
GGCTAATTTCAGCCACAATTCGCCTGCAAAATAACCTCCCGTTCCTTAATTTCACCCGAA
TTACCCATTATCTGTAGCTGATCAGCACACTTTTAGATTTTCCAATCATATTGTACCTAT
CATAATTAGCATTAAGGGCCCTTAATACATGGATCCCTTCACTCAGCTTCAATTCTCTGC
ATTTGGTCGAGGCGCGGTCGAGGCGCGCTGCAATGGCAGCTGCTGACCAGCTTTGAGCTC
CCATTCTCTGCTCATGAGCATAATATAGAAGCTCGGCAGCTCGTCCAACAAATGTGGCTT
GCGTGGAGAAGACGAGACATGAACAAATTATTTGCAGGGCCGCCACACCCTCATCAGAAA
AAGATGATCAGCCAGGGACGATGCGAATTTTCTTGTGG
■■Homology search results ■■ -
sp_hit_id Q9BG98
Definition sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subunit alpha-1 OS=Oryctolagus cuniculus
Align length 57
Score (bit) 31.2
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955835|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C13, 5'
(578 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subuni... 31 3.9
sp|Q5RAV8|M6PBP_PONAB Mannose-6-phosphate receptor-binding prote... 30 8.7
sp|O60664|M6PBP_HUMAN Mannose-6-phosphate receptor-binding prote... 30 8.7

>sp|Q9BG98|KCMA1_RABIT Calcium-activated potassium channel subunit
alpha-1 OS=Oryctolagus cuniculus GN=KCNMA1 PE=2 SV=1
Length = 1179

Score = 31.2 bits (69), Expect = 3.9
Identities = 21/57 (36%), Positives = 29/57 (50%)
Frame = -1

Query: 530 GCGGPANNLFMSRLLHASHICWTSCRASILCS*AENGSSKLVSSCHCSAPRPRLDQM 360
G GG + L MS +HASH+ S AS S + + SS SS S P++D +
Sbjct: 17 GGGGGGSGLRMSSNIHASHL---SLDASSSSSSSSSSSSSSSSSSSSSVHEPKMDAL 70


>sp|Q5RAV8|M6PBP_PONAB Mannose-6-phosphate receptor-binding protein
1 OS=Pongo abelii GN=M6PRBP1 PE=2 SV=1
Length = 434

Score = 30.0 bits (66), Expect = 8.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1

Query: 445 IEARQLVQQMWLAWRRRDMNKLFAGPPHPHQ 537
+E ++ + QMWL+W ++ + PP P Q
Sbjct: 291 VEGQEKLHQMWLSWNQKQLQGPEKEPPKPEQ 321


>sp|O60664|M6PBP_HUMAN Mannose-6-phosphate receptor-binding protein
1 OS=Homo sapiens GN=M6PRBP1 PE=1 SV=2
Length = 434

Score = 30.0 bits (66), Expect = 8.7
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1

Query: 445 IEARQLVQQMWLAWRRRDMNKLFAGPPHPHQ 537
+E ++ + QMWL+W ++ + PP P Q
Sbjct: 291 VEGQEKLHQMWLSWNQKQLQGPEKEPPKPEQ 321


tr_hit_id Q4S1E9
Definition tr|Q4S1E9|Q4S1E9_TETNG Chromosome 13 SCAF14769, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
Align length 66
Score (bit) 34.3
E-value 5.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955835|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C13, 5'
(578 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4S1E9|Q4S1E9_TETNG Chromosome 13 SCAF14769, whole genome sho... 34 5.1
tr|Q4RBI1|Q4RBI1_TETNG Glucose-6-phosphate isomerase (Fragment) ... 34 6.7
tr|Q4FR26|Q4FR26_PSYA2 Putative sugar efflux transporter, Major ... 34 6.7
tr|Q1Q9B7|Q1Q9B7_PSYCK Major facilitator superfamily MFS_1 OS=Ps... 34 6.7
tr|A7AN67|A7AN67_BABBO ATPase domain containing protein OS=Babes... 34 6.7

>tr|Q4S1E9|Q4S1E9_TETNG Chromosome 13 SCAF14769, whole genome
shotgun sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00025587001 PE=4 SV=1
Length = 522

Score = 34.3 bits (77), Expect = 5.1
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = -2

Query: 235 VKLRNGRLFCRRIVAEISPTNYGRFCVISRMDR*GWSDYCVEILGVHARVCTVCVCVCWS 56
+K+ + R F I AEI+ Y C S R ++ Y + +VCVCVC
Sbjct: 253 LKMNSIRSFIEAIRAEIA--QYWEKCFYSPEQRKAFAPYHTG----ESSATSVCVCVCVC 306

Query: 55 ERERER 38
ERERER
Sbjct: 307 ERERER 312


>tr|Q4RBI1|Q4RBI1_TETNG Glucose-6-phosphate isomerase (Fragment)
OS=Tetraodon nigroviridis GN=GSTENG00036911001 PE=3 SV=1
Length = 329

Score = 33.9 bits (76), Expect = 6.7
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3

Query: 3 RPPRLLHHKVCSLSLSLSDQHTHTHTVHTRAC 98
R LHH++ L LSLS HTHTHT HT C
Sbjct: 206 RRDHALHHRLQGL-LSLSHTHTHTHT-HTHTC 235


>tr|Q4FR26|Q4FR26_PSYA2 Putative sugar efflux transporter, Major
facilitator superfamily (MFS) OS=Psychrobacter arcticus
(strain DSM 17307 / 273-4) GN=Psyc_1684 PE=4 SV=1
Length = 454

Score = 33.9 bits (76), Expect = 6.7
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1

Query: 316 GPLIHGSLHSASILCIWSRRGRGALQWQLLTSFELPFSAHEHNIEARQLVQQMWLAWRRR 495
GPL+ GSL + + W G L LL P +HN++ + + QQ+ +
Sbjct: 150 GPLLVGSLGISGLF--WLTAGFAVLAMLLLLFVPTPLRVLKHNLDNKSIGQQLATVLKIG 207

Query: 496 DMNKLFAG 519
D+N+L G
Sbjct: 208 DLNRLHIG 215


>tr|Q1Q9B7|Q1Q9B7_PSYCK Major facilitator superfamily MFS_1
OS=Psychrobacter cryohalolentis (strain K5)
GN=Pcryo_1959 PE=4 SV=1
Length = 454

Score = 33.9 bits (76), Expect = 6.7
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1

Query: 316 GPLIHGSLHSASILCIWSRRGRGALQWQLLTSFELPFSAHEHNIEARQLVQQMWLAWRRR 495
GPL+ GSL + + W G L LL P +HN++ + + QQ+ +
Sbjct: 150 GPLLVGSLGISGLF--WLTAGFAVLAMLLLLFVPTPLRVLKHNLDNKSIGQQLATVLKIG 207

Query: 496 DMNKLFAG 519
D+N+L G
Sbjct: 208 DLNRLHIG 215


>tr|A7AN67|A7AN67_BABBO ATPase domain containing protein OS=Babesia
bovis GN=BBOV_III004380 PE=4 SV=1
Length = 874

Score = 33.9 bits (76), Expect = 6.7
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1

Query: 578 PQENSHRPWLIIFF**GCGGPANNLFMSRLLHASHICWTSCRASILCS*AENGSSKLVSS 399
P E S +PWL +F C F RLL CW S A++L + S +V+S
Sbjct: 715 PGEESQKPWLDVF----CED-----FARRLLGLGGACWRSLPATLLLMMLTSSSEHMVTS 765

Query: 398 CHCS 387
H S
Sbjct: 766 DHSS 769