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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955836
Clone id TST39A01NGRL0024_C14
Library
Length 569
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_C14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
CAAAGTGAACACATAATCAAGAAAGGTAAGCAGGAAGGAAGCCGCAGTCATGGCAGCAAC
AACTGCCTCCCTCTCCTCATCTGTCTTCAGCGGGCAGCAATTGAAGCCCGTCAATGAGCT
CTCTCGCAAGGTGGGAGCAGGTGAGGCCCGCGTTCAGATGATGGCCCCCAAGAAGTCCTC
ATCTGGCAGCATCTGGTACGGTTCCGACCGCCCTCTCTACCTGGGCCCTTTCTCTGGCTC
TCCCCCATCCTACCTCACTGGTGAGTTCCCCGGTGACTATGGGTGGGACACAGCTGGTCT
GTCCGCAGACCCAGAGACCTTCGCCAAGAACAGGGAGCTGGAGGTGATCCATTCCAGATG
GGCCATGTTGGGAGCCTTGGGCTGTGTGACGCCCGAGCTGCTGGCAAAGAACGGTGTCAA
GTTTGGTGAGGCTGTGTGGTTCAAGGCTGGCTCCCAGATCTTCGCCGATGGCGGCCTTGA
TTATCTTGGCAACCCGAGCCTTGTCCACGCTCAAAAGCATTTTGGCCATTTGGGCCTGCC
AGGTCATCCTTATGGGGCGCTGTTGAGGG
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 156
Score (bit) 294.0
E-value 2.0e-79
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955836|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C14, 5'
         (569 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   294   2e-79
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   243   5e-67
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   234   2e-64
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   233   5e-64
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   230   3e-63
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   232   8e-63
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   239   9e-63
sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37, chlorop...   231   1e-62
sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2, chloropl...   238   2e-62
sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36, chlorop...   231   2e-62
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   237   3e-62
sp|P13851|CB21_SINAL Chlorophyll a-b binding protein 1, chloropl...   236   6e-62
sp|P04777|CB21_ARATH Chlorophyll a-b binding protein 165/180, ch...   236   6e-62
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   235   1e-61
sp|P27520|CB215_PEA Chlorophyll a-b binding protein 215, chlorop...   228   1e-61
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   233   4e-61
sp|P12331|CB22_ORYSJ Chlorophyll a-b binding protein 2, chloropl...   233   5e-61
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   233   5e-61
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   232   9e-61
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   232   9e-61
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   232   9e-61
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   232   9e-61
sp|P04780|CB22_PETSP Chlorophyll a-b binding protein 22L, chloro...   232   1e-60
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   224   2e-60
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   224   2e-60
sp|P07371|CB22_PEA Chlorophyll a-b binding protein AB80, chlorop...   231   2e-60
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   231   2e-60
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   230   3e-60
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   229   7e-60
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   229   9e-60

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  294 bits (753), Expect = 2e-79
 Identities = 145/156 (92%), Positives = 152/156 (97%), Gaps = 1/156 (0%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 226
           MA +TA+L+S+ FSGQQLKPVNELSRKVGAGEARVQMMAPK K+ SGSIWYGSDRPLYLG
Sbjct: 1   MATSTAALTST-FSGQQLKPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLG 59

Query: 227 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 406
           PFSGSPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA
Sbjct: 60  PFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 119

Query: 407 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           KNGVKFGEAVWFKAGSQIFA+GGLDYLGNPSLVHAQ
Sbjct: 120 KNGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQ 155



 Score = 33.5 bits (75), Expect = 0.76
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 146 LGNPSLVHAQSILAIWACQVILMG 169


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  243 bits (619), Expect(2) = 5e-67
 Identities = 119/152 (78%), Positives = 126/152 (82%), Gaps = 1/152 (0%)
 Frame = +2

Query: 62  TASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSG 238
           T+++  S F+GQ L KP NEL RKVG    RV M    KS+  SIWYG DRP YLGPFS 
Sbjct: 3   TSTIQQSAFAGQTLLKPQNELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 239 SPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGV 418
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 419 KFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           KFGEAVWFKAGSQIF +GGLDYLGNP+LVHAQ
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQ 154



 Score = 32.3 bits (72), Expect(2) = 5e-67
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWACQV+LMG
Sbjct: 154 QSILAIWACQVVLMG 168


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  234 bits (596), Expect(2) = 2e-64
 Identities = 115/153 (75%), Positives = 127/153 (83%), Gaps = 2/153 (1%)
 Frame = +2

Query: 62  TASLSSSVFSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 235
           T+++  S F+GQ  LK  NEL  K+GA G  RV M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 236 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 415
              PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 416 VKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           VKFGEAVWFKAGSQIF++GGLDYLGNP+L+HAQ
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQ 155



 Score = 32.3 bits (72), Expect(2) = 2e-64
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWACQV+LMG
Sbjct: 155 QSILAIWACQVVLMG 169


>sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4,
           chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1
          Length = 265

 Score =  233 bits (593), Expect(2) = 5e-64
 Identities = 114/153 (74%), Positives = 125/153 (81%), Gaps = 2/153 (1%)
 Frame = +2

Query: 62  TASLSSSVFSGQQL-KPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 235
           T ++  S F GQ + K  NE  RKVG  GE R+ M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TCAIQQSAFVGQAVGKSQNEFIRKVGNFGEGRITMRRTVKSAPQSIWYGEDRPKYLGPFS 62

Query: 236 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 415
              PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 416 VKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           VKFGEAVWFKAGSQIF++GGLDYLGNP+LVHAQ
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQ 155



 Score = 32.3 bits (72), Expect(2) = 5e-64
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWACQV+LMG
Sbjct: 155 QSILAIWACQVVLMG 169


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  230 bits (586), Expect(2) = 3e-63
 Identities = 110/155 (70%), Positives = 126/155 (81%), Gaps = 2/155 (1%)
 Frame = +2

Query: 56  ATTASLSSSVFSGQQL--KPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           AT +++ SS  +GQ L     NEL +KVG  +AR+ M    +S+  SIWYG DRP YLGP
Sbjct: 2   ATASAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGP 61

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
           FS   PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAK
Sbjct: 62  FSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAK 121

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           NG+KFGEAVWFKAG+QIF++GGLDY GNP+L+HAQ
Sbjct: 122 NGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQ 156



 Score = 32.3 bits (72), Expect(2) = 3e-63
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWACQV+LMG
Sbjct: 156 QSILAIWACQVVLMG 170


>sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII type
           I, chloroplastic OS=Lemna gibba PE=3 SV=1
          Length = 264

 Score =  232 bits (592), Expect(2) = 8e-63
 Identities = 111/151 (73%), Positives = 127/151 (84%), Gaps = 1/151 (0%)
 Frame = +2

Query: 65  ASLSSSVFSGQQ-LKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGPFSGS 241
           +++ SS F+GQ  LK  +EL RKVG  + R  M    K+   SIWYG+DRP +LGPFS  
Sbjct: 4   SAIQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQ 63

Query: 242 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNGVK 421
            PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC+ PELL+KNGV+
Sbjct: 64  TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQ 123

Query: 422 FGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           FGEAVWFKAG+QIF++GGLDYLGNP+LVHAQ
Sbjct: 124 FGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQ 154



 Score = 28.5 bits (62), Expect(2) = 8e-63
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWA QV+LMG
Sbjct: 154 QSILAIWATQVVLMG 168


>sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplastic
           OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1
          Length = 266

 Score =  239 bits (609), Expect = 9e-63
 Identities = 123/159 (77%), Positives = 128/159 (80%), Gaps = 4/159 (2%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAP----KKSSSGSIWYGSDRPL 217
           MAATT SLSSS F+G   K V  L      G+ARV M       K+ SS S WYGSDR L
Sbjct: 1   MAATTMSLSSSSFAG---KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVL 57

Query: 218 YLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPE 397
           YLGP SG PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE
Sbjct: 58  YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 117

Query: 398 LLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           LLA+NGVKFGEA WFKAGSQIF+DGGLDYLGNPSLVHAQ
Sbjct: 118 LLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQ 156



 Score = 32.3 bits (72), Expect = 1.7
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +S+LAIWACQV+LMG
Sbjct: 147 LGNPSLVHAQSLLAIWACQVVLMG 170


>sp|P12062|CB26_PETSP Chlorophyll a-b binding protein 37,
           chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1
          Length = 265

 Score =  231 bits (589), Expect(2) = 1e-62
 Identities = 112/153 (73%), Positives = 126/153 (82%), Gaps = 2/153 (1%)
 Frame = +2

Query: 62  TASLSSSVFSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 235
           T+++  S F+GQ  LK  NEL RK+G+ G  R  M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFS 62

Query: 236 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 415
              PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 416 VKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           V FGEAVWFKAGSQIF++GGLDYLGNP+L+HAQ
Sbjct: 123 VTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQ 155



 Score = 28.9 bits (63), Expect(2) = 1e-62
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILAIWA QV+LMG
Sbjct: 155 QSILAIWAAQVVLMG 169


>sp|P04778|CB22_ARATH Chlorophyll a-b binding protein 2,
           chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1
          Length = 267

 Score =  238 bits (607), Expect = 2e-62
 Identities = 117/156 (75%), Positives = 129/156 (82%), Gaps = 1/156 (0%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPK-KSSSGSIWYGSDRPLYLG 226
           MAA+T +LSS  F+G+ +K     S  +G+G   ++    K K  SGS WYGSDR  YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 227 PFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLA 406
           PFSG  PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCV PELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 407 KNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           +NGVKFGEAVWFKAGSQIF+DGGLDYLGNPSLVHAQ
Sbjct: 121 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQ 156


>sp|P27494|CB23_TOBAC Chlorophyll a-b binding protein 36,
           chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1
          Length = 265

 Score =  231 bits (589), Expect(2) = 2e-62
 Identities = 112/153 (73%), Positives = 126/153 (82%), Gaps = 2/153 (1%)
 Frame = +2

Query: 62  TASLSSSVFSGQQ-LKPVNELSRKVGA-GEARVQMMAPKKSSSGSIWYGSDRPLYLGPFS 235
           T+++  S F+GQ  LK  NEL RK+G+    R  M    KS+  SIWYG DRP YLGPFS
Sbjct: 3   TSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGPFS 62

Query: 236 GSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 415
              PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  EQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 416 VKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           VKFGEAVWFKAGSQIF++GGLDYLGNP+L+HAQ
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQ 155



 Score = 28.1 bits (61), Expect(2) = 2e-62
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +3

Query: 513 KSILAIWACQVILMG 557
           +SILA+WA QV+LMG
Sbjct: 155 QSILAVWASQVVLMG 169
tr_hit_id Q5CCK8
Definition tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum capillus-veneris
Align length 162
Score (bit) 293.0
E-value 5.0e-78
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955836|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C14, 5'
         (569 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   293   5e-78
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   254   2e-66
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   251   2e-65
tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   250   4e-65
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   248   2e-64
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   247   4e-64
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   247   4e-64
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   246   5e-64
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   246   5e-64
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   246   5e-64
tr|Q9XF87|Q9XF87_ARATH Lhcb2 protein (At3g27700) (Light harvesti...   236   6e-64
tr|O49812|O49812_BETVU Chlorophyll a/b-binding protein OS=Beta v...   239   8e-64
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   235   8e-64
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   235   8e-64
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   234   1e-63
tr|Q9XF86|Q9XF86_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   238   2e-63
tr|Q9SYW9|Q9SYW9_ARATH Lhcb2 protein OS=Arabidopsis thaliana GN=...   238   2e-63
tr|Q9SHR7|Q9SHR7_ARATH Putative chlorophyll a/b binding protein ...   238   2e-63
tr|Q3LFQ5|Q3LFQ5_PANGI Chlorophyll a/b binding protein OS=Panax ...   238   2e-63
tr|A5ASG6|A5ASG6_VITVI Putative uncharacterized protein (Chromos...   234   2e-63
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   238   2e-63
tr|B2BAK8|B2BAK8_LILLO Chlorophyll a/b binding protein of LHCII ...   237   3e-63
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   233   3e-63
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   233   3e-63
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   243   7e-63
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   236   8e-63
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   236   8e-63
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   235   1e-62
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   242   1e-62
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   238   1e-62

>tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiantum
           capillus-veneris GN=AcCab1 PE=4 SV=1
          Length = 215

 Score =  293 bits (750), Expect = 5e-78
 Identities = 148/162 (91%), Positives = 150/162 (92%), Gaps = 7/162 (4%)
 Frame = +2

Query: 50  MAATT-------ASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSD 208
           MAATT       A LSSSVFSGQQLKPVNELSRKVG  EARVQMMAPKKSSSG+I YG+D
Sbjct: 1   MAATTTFLSSVVAFLSSSVFSGQQLKPVNELSRKVGTSEARVQMMAPKKSSSGNIRYGAD 60

Query: 209 RPLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 388
           R LYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV
Sbjct: 61  RLLYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCV 120

Query: 389 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ
Sbjct: 121 TPELLAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 162



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 153 LGNPSLVHAQSILAIWACQVILMG 176


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  254 bits (649), Expect = 2e-66
 Identities = 122/155 (78%), Positives = 136/155 (87%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           MAA TA  S+++     LKPVNELSRKVG+ EARV M    KS+S SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYLGP 60

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
           FSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 61  FSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 120

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 155


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  251 bits (641), Expect = 2e-65
 Identities = 121/155 (78%), Positives = 132/155 (85%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           MAA TA  S+++     LKPVNELSRKVG  EAR+ M      SS SIWYG+DRP YLGP
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGP 60

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 61  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 120

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 155


>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  250 bits (638), Expect = 4e-65
 Identities = 122/155 (78%), Positives = 133/155 (85%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           MAA TA  S+++     LKPVNELSRKVG  EARV M   K S S SIWYG+DRP +LGP
Sbjct: 1   MAAATAMHSTTLAGQSLLKPVNELSRKVGTSEARVSMR--KSSGSDSIWYGADRPKFLGP 58

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           NGVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 119 NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 153



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 144 LGNPSLVHAQSILAIWACQVILMG 167


>tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_175594 PE=4 SV=1
          Length = 267

 Score =  248 bits (633), Expect = 2e-64
 Identities = 122/157 (77%), Positives = 135/157 (85%), Gaps = 2/157 (1%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLYL 223
           MAA TA  S+++     LKPVNELSRKVG  EARV M   A K ++S SIWYG+DRP YL
Sbjct: 1   MAAATAMHSTALAGQSLLKPVNELSRKVGNVEARVSMRKSASKSAASDSIWYGADRPKYL 60

Query: 224 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 403
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 404 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 157


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  247 bits (630), Expect = 4e-64
 Identities = 120/157 (76%), Positives = 134/157 (85%), Gaps = 2/157 (1%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGS--IWYGSDRPLYL 223
           MAA TA  S+++     LKPVNELSRKVG+ +ARV M      S+GS  IWYG+DRP YL
Sbjct: 1   MAACTACASTALAGQSLLKPVNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYL 60

Query: 224 GPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELL 403
           GPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELL
Sbjct: 61  GPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELL 120

Query: 404 AKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           AK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 157



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 148 LGNPSLVHAQSILAIWACQVILMG 171


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  247 bits (630), Expect = 4e-64
 Identities = 122/155 (78%), Positives = 134/155 (86%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           MAA TA+ S+++     LK +NELSRKVG  +ARV M   K SSS SIWYG+DRP YLGP
Sbjct: 1   MAACTATHSTALAGQTALKSINELSRKVGNVQARVTMR--KASSSDSIWYGADRPKYLGP 58

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
            SG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGCVTPELLAK
Sbjct: 59  LSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAK 118

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           NGVKFGEAVWFKAGSQIF++GGLDYLGNPSLVHAQ
Sbjct: 119 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQ 153


>tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein
           OS=Physcomitrella patens PE=2 SV=1
          Length = 268

 Score =  246 bits (629), Expect = 5e-64
 Identities = 120/158 (75%), Positives = 136/158 (86%), Gaps = 3/158 (1%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 220
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 221 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 400
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 401 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 158



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 149 LGNPSLVHAQSILAIWACQVILMG 172


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  246 bits (629), Expect = 5e-64
 Identities = 119/155 (76%), Positives = 134/155 (86%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQLKPVNELSRKVGAGEARVQMMAPKKSSSGSIWYGSDRPLYLGP 229
           MAA TA  S+++     LKPVNELSR+VGA EARV M   K + S SIWYG+DRP +LGP
Sbjct: 1   MAAATACASTALAGQSLLKPVNELSRRVGANEARVTMR--KSAGSDSIWYGADRPKFLGP 58

Query: 230 FSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAK 409
           FSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPELLAK
Sbjct: 59  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 118

Query: 410 NGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           +GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 119 SGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 153



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 144 LGNPSLVHAQSILAIWACQVILMG 167


>tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_219547 PE=4 SV=1
          Length = 268

 Score =  246 bits (629), Expect = 5e-64
 Identities = 120/158 (75%), Positives = 136/158 (86%), Gaps = 3/158 (1%)
 Frame = +2

Query: 50  MAATTASLSSSVFSGQQL-KPVNELSRKVGAGEARVQMM--APKKSSSGSIWYGSDRPLY 220
           MA    +++S+V +GQ L KPV+ELSRKV AGEARV M     K S S SIWYG+DRP +
Sbjct: 1   MATAATAMNSTVLAGQALLKPVSELSRKVNAGEARVTMRKTVSKSSGSDSIWYGADRPKF 60

Query: 221 LGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 400
           LGPFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIH+RWAMLGALGC+TPEL
Sbjct: 61  LGPFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPEL 120

Query: 401 LAKNGVKFGEAVWFKAGSQIFADGGLDYLGNPSLVHAQ 514
           LAK+GVKFGEAVWFKAG+QIF++GGLDYLGNPSLVHAQ
Sbjct: 121 LAKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQ 158



 Score = 33.5 bits (75), Expect = 8.5
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = +3

Query: 486 LATRALSTLKSILAIWACQVILMG 557
           L   +L   +SILAIWACQVILMG
Sbjct: 149 LGNPSLVHAQSILAIWACQVILMG 172