BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955840|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C18, 5'
         (613 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransfera...    33   0.89 
sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransfera...    33   1.2  

>sp|A8AFL6|RSMF_CITK8 Ribosomal RNA small subunit methyltransferase
           F OS=Citrobacter koseri (strain ATCC BAA-895 / CDC
           4225-83 / SGSC4696) GN=rsmF PE=3 SV=1
          Length = 479

 Score = 33.5 bits (75), Expect = 0.89
 Identities = 31/95 (32%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
 Frame = +1

Query: 22  ICNALHQVLPSFLLSRPLCHLLRPPQKAQCLLQDEGSPEVKE-LP---SFPSGSLPLCAQ 189
           I +A H + P   L    C L R   ++ CL   E  PE  E LP    FP     L A+
Sbjct: 229 IDSAFHALRPGGTLVYSTCTLNREENESVCLWLKETYPEAVEFLPLGDLFPGAERALTAE 288

Query: 190 LDKGFLSVASQLSSTTGFYRYFVHKSAHQDSLLSP 294
              GFL V  Q+    GF+   + K+A    L +P
Sbjct: 289 ---GFLHVFPQIYDCEGFFVARLRKTAAIPPLPAP 320


>sp|A4WBJ4|RSMF_ENT38 Ribosomal RNA small subunit methyltransferase
           F OS=Enterobacter sp. (strain 638) GN=rsmF PE=3 SV=1
          Length = 480

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
 Frame = +1

Query: 22  ICNALHQVLPSFLLSRPLCHLLRPPQKAQCLLQDEGSPEVKE-LPS---FPSGSLPLCAQ 189
           I +A H + P  +L    C L R   ++ CL   E  P+  E LP    FPS +    A 
Sbjct: 229 IDSAFHALRPGGMLVYSTCTLNRDENESVCLWLKEQYPQAVEFLPLDSLFPSATE---AV 285

Query: 190 LDKGFLSVASQLSSTTGFYRYFVHKSAHQDSLLSP 294
             +GFL V  Q+    GF+   + K+A  + L +P
Sbjct: 286 TPEGFLHVFPQIFDCEGFFVARMRKTAVIEPLPAP 320

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955840|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_C18, 5'
         (613 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|O64545|O64545_ARATH YUP8H12R.32 protein (Putative uncharacter...    28   8.0  
tr|A4QUL4|A4QUL4_MAGGR Putative uncharacterized protein OS=Magna...    33   10.0 

>tr|O64545|O64545_ARATH YUP8H12R.32 protein (Putative
           uncharacterized protein At1g79060) (At1g79060)
           OS=Arabidopsis thaliana GN=YUP8H12R.32 PE=2 SV=1
          Length = 396

 Score = 28.5 bits (62), Expect(2) = 8.0
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +2

Query: 404 TSISVFLILAIHASVPL*NSGVFVYIPALREALLTMLSMESPSTLLSMDSSVHDESVMPR 583
           +S+  FL  +  +S    ++ + + +P L+++    +S+ S    LS  SS HD   +PR
Sbjct: 156 SSLKQFLHRSSRSSSSSSDASLLMSLPLLKDSDSESVSISSSRMSLSSSSSGHDHEDLPR 215

Query: 584 L 586
           L
Sbjct: 216 L 216



 Score = 24.3 bits (51), Expect(2) = 8.0
 Identities = 21/65 (32%), Positives = 24/65 (36%), Gaps = 7/65 (10%)
 Frame = +1

Query: 160 PSGSLPLCAQLDKGFLSVASQLSSTT---GFYRYF----VHKSAHQDSLLSPP*MERCCS 318
           P G LP       G L    Q   TT   G  R      +  S   D+    P   RC S
Sbjct: 63  PVGMLPADELFSDGKLVTKQQQQQTTEIGGKCRRMEVVEIEISGGGDNCSFSPKAPRCSS 122

Query: 319 QWRDL 333
           +WRDL
Sbjct: 123 RWRDL 127


>tr|A4QUL4|A4QUL4_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_09566 PE=4 SV=1
          Length = 377

 Score = 33.5 bits (75), Expect = 10.0
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -3

Query: 323 HCEQH-LSIHGGDNKES*WADL*TKYL*NPVVEDNCDATDRKPLSSCAQRGREPLGKEGS 147
           +CE H LS+ GGD K   W D               D+ ++   ++C   G EPL  EG 
Sbjct: 317 YCEPHWLSVGGGDGKYGLWLD---------------DSLEKGVSATCLTFGNEPLSDEGE 361

Query: 146 SF 141
            F
Sbjct: 362 KF 363