DK955847 |
Clone id |
TST39A01NGRL0024_D01 |
Library |
TST39 |
Length |
617 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_D01. 5' end sequence. |
Accession |
DK955847 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CAGAGGAGCTCCTACAGTGCTCTCTCCTCTCCTCCTCCGCAAATTCGAGCTTGATCTGCG TTTTCCTCTCTTCTTGCAGTACTTCAGATCTCAAGAGTAACCTCCCTTATCACAATGGCT CTCTCTCAAATCAGTGGAAGGATTGCTTTCTCCAATCTTGTTACCATCCTCGTGGTGATG GGTGTTTTGGCAATGGCCGGACAAAGTGCAATGGCACAAGTTGAACCTCCTACTCCAACT CCCACAACTGGTGATGATAATGCTGCTACTTTAACCCCAGTTGCGTTTCTTGCCACGGCT TTTGCCTCTCTCCTTGTTGGAGTGTTTTTGAGCTACTAATTCTTTCAATCATGTGAGCAC ATTGAGAGGGAGTGGCAACTTTTGTATTTGACCTACCCTACATATGATGAGTTACGAGAC ACACCGTAGGAACTCCAGCTCCCATTTCCTACCTATACCTAGCGATTTCATCTGCTTTTT ATAGAGTCATGTGTCACTGTTGTTTCTTGCGGCTCTTTAAACACACCCGTATTACTCCAG AGAAGCCATCTCGACAACCCCCACATTGGTAAGCATCTTCATTTGCATCCTGTCCAGATG ATGTGGGGCTACTTCCC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26010 |
Definition |
sp|P26010|ITB7_HUMAN Integrin beta-7 OS=Homo sapiens |
Align length |
58 |
Score (bit) |
32.0 |
E-value |
2.6 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q1Q0 |
Definition |
tr|A7Q1Q0|A7Q1Q0_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
47 |
Score (bit) |
69.7 |
E-value |
1.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955847|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_D01, 5' (617 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q1Q0|A7Q1Q0_VITVI Chromosome chr7 scaffold_44, whole genome... 70 1e-10 tr|B8LQ84|B8LQ84_PICSI Putative uncharacterized protein OS=Picea... 69 2e-10 tr|A7QKN1|A7QKN1_VITVI Chromosome chr2 scaffold_113, whole genom... 69 2e-10 tr|Q6K9N5|Q6K9N5_ORYSJ Os02g0621800 protein OS=Oryza sativa subs... 67 8e-10 tr|B8AFT8|B8AFT8_ORYSI Putative uncharacterized protein OS=Oryza... 67 8e-10 tr|B5WWZ9|B5WWZ9_LOTJA Long chain fatty alcohol oxidase FAO2 OS=... 65 3e-09 tr|B4G214|B4G214_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|B6SXM3|B6SXM3_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 64 7e-09 tr|Q8W5N7|Q8W5N7_ORYSA Putative alcohol oxidase OS=Oryza sativa ... 63 1e-08 tr|Q7XDG3|Q7XDG3_ORYSJ Os10g0474100 protein OS=Oryza sativa subs... 63 1e-08 tr|A2Z8H1|A2Z8H1_ORYSI Putative uncharacterized protein OS=Oryza... 63 1e-08 tr|Q8W5P3|Q8W5P3_ORYSA Putative alcohol oxidase OS=Oryza sativa ... 63 2e-08 tr|Q7XDF7|Q7XDF7_ORYSJ Os10g0474800 protein OS=Oryza sativa subs... 63 2e-08 tr|B8BHG0|B8BHG0_ORYSI Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|B4G0N6|B4G0N6_MAIZE Putative uncharacterized protein OS=Zea m... 63 2e-08 tr|A3C5P2|A3C5P2_ORYSJ Putative uncharacterized protein OS=Oryza... 63 2e-08 tr|A7NXF0|A7NXF0_VITVI Chromosome chr5 scaffold_2, whole genome ... 62 2e-08 tr|A5AH38|A5AH38_VITVI Putative uncharacterized protein OS=Vitis... 62 2e-08 tr|A3A965|A3A965_ORYSJ Putative uncharacterized protein OS=Oryza... 62 3e-08 tr|A9S9A5|A9S9A5_PHYPA Predicted protein OS=Physcomitrella paten... 62 4e-08 tr|O65709|O65709_ARATH Putative uncharacterized protein AT4g1938... 60 1e-07 tr|A9S535|A9S535_PHYPA Predicted protein OS=Physcomitrella paten... 60 1e-07 tr|Q8W5P8|Q8W5P8_ORYSA Putative oxidase OS=Oryza sativa GN=OSJNB... 59 3e-07 tr|Q8W5P5|Q8W5P5_ORYSA Putative alcohol oxidase OS=Oryza sativa ... 59 3e-07 tr|Q337K8|Q337K8_ORYSJ Os10g0475000 protein OS=Oryza sativa subs... 59 3e-07 tr|B8BHG1|B8BHG1_ORYSI Putative uncharacterized protein OS=Oryza... 59 3e-07 tr|Q9ZWB9|Q9ZWB9_ARATH F21M11.7 protein OS=Arabidopsis thaliana ... 58 4e-07 tr|Q9M0H4|Q9M0H4_ARATH Putative uncharacterized protein AT4g2857... 57 9e-07 tr|Q94BP3|Q94BP3_ARATH Putative uncharacterized protein At4g2857... 57 9e-07 tr|Q8LDP0|Q8LDP0_ARATH Putative uncharacterized protein OS=Arabi... 57 9e-07
>tr|A7Q1Q0|A7Q1Q0_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028553001 PE=4 SV=1 Length = 722
Score = 69.7 bits (169), Expect = 1e-10 Identities = 33/47 (70%), Positives = 38/47 (80%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L IE+ VTV +CGSL TP LL S L+NPHIGK+LHLHPV M+WGYF Sbjct: 440 LQIEARVTVSACGSLLTPPLLLSSGLENPHIGKNLHLHPVLMVWGYF 486
>tr|B8LQ84|B8LQ84_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 743
Score = 68.9 bits (167), Expect = 2e-10 Identities = 29/47 (61%), Positives = 40/47 (85%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 +F+++ VTV +CGSL TP+LL+ S L NP+IG++LHLHPVQM WG+F Sbjct: 461 IFVQAKVTVAACGSLLTPLLLRSSGLRNPNIGRNLHLHPVQMAWGFF 507
>tr|A7QKN1|A7QKN1_VITVI Chromosome chr2 scaffold_113, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001190001 PE=4 SV=1 Length = 813
Score = 68.9 bits (167), Expect = 2e-10 Identities = 29/48 (60%), Positives = 40/48 (83%) Frame = +1
Query: 472 LLFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 + +ES VT+V+CG+++TP LL+RS L NP+IGK+LHLHPV M WG+F Sbjct: 478 VFMVESKVTIVACGAISTPGLLKRSGLKNPNIGKNLHLHPVAMAWGHF 525
>tr|Q6K9N5|Q6K9N5_ORYSJ Os02g0621800 protein OS=Oryza sativa subsp. japonica GN=OJ1234_B11.20 PE=4 SV=1 Length = 770
Score = 67.0 bits (162), Expect = 8e-10 Identities = 31/47 (65%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L + + VTV + GSL TPVLLQRS L NPHIGK+LHLHP + WGYF Sbjct: 489 LEVRAKVTVSAAGSLLTPVLLQRSGLTNPHIGKNLHLHPTALAWGYF 535
>tr|B8AFT8|B8AFT8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08118 PE=4 SV=1 Length = 770
Score = 67.0 bits (162), Expect = 8e-10 Identities = 31/47 (65%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L + + VTV + GSL TPVLLQRS L NPHIGK+LHLHP + WGYF Sbjct: 489 LEVRAKVTVSAAGSLLTPVLLQRSGLTNPHIGKNLHLHPTALAWGYF 535
>tr|B5WWZ9|B5WWZ9_LOTJA Long chain fatty alcohol oxidase FAO2 OS=Lotus japonicus GN=fao2 PE=2 SV=1 Length = 750
Score = 65.1 bits (157), Expect = 3e-09 Identities = 30/47 (63%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L IES VT+ +CGSL+TP L+ S L NP+IGK+LHLHP Q WGYF Sbjct: 470 LQIESKVTISACGSLSTPPLMISSGLKNPNIGKNLHLHPCQFAWGYF 516
>tr|B4G214|B4G214_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 466
Score = 64.7 bits (156), Expect = 4e-09 Identities = 29/47 (61%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L IE+ V++ +CG+L TP LL+RS L N HIG +LHLHPV M WGYF Sbjct: 186 LRIEAKVSIAACGALMTPPLLRRSGLKNRHIGSNLHLHPVSMAWGYF 232
>tr|B6SXM3|B6SXM3_MAIZE Oxidoreductase OS=Zea mays PE=2 SV=1 Length = 768
Score = 63.9 bits (154), Expect = 7e-09 Identities = 30/47 (63%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L + + VTV SCGSL TPVLL+ S L N HIGK+LHLHP ++WGYF Sbjct: 483 LEVTARVTVSSCGSLLTPVLLRGSGLRNRHIGKNLHLHPTALVWGYF 529
>tr|Q8W5N7|Q8W5N7_ORYSA Putative alcohol oxidase OS=Oryza sativa GN=OSJNBa0001K12.13 PE=4 SV=1 Length = 756
Score = 63.2 bits (152), Expect = 1e-08 Identities = 29/47 (61%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L IE+ V+V +CG+L TP LL+ S L N HIG++LHLHPV M WGYF Sbjct: 463 LRIEAKVSVSACGALMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYF 509
>tr|Q7XDG3|Q7XDG3_ORYSJ Os10g0474100 protein OS=Oryza sativa subsp. japonica GN=Os10g0474100 PE=4 SV=2 Length = 784
Score = 63.2 bits (152), Expect = 1e-08 Identities = 29/47 (61%), Positives = 36/47 (76%) Frame = +1
Query: 475 LFIESCVTVVSCGSLNTPVLLQRSHLDNPHIGKHLHLHPVQMMWGYF 615 L IE+ V+V +CG+L TP LL+ S L N HIG++LHLHPV M WGYF Sbjct: 491 LRIEAKVSVSACGALMTPPLLRNSGLKNRHIGRNLHLHPVSMAWGYF 537
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