BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955857|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_D11, 5'
         (519 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small...    33   0.80 
sp|A3LZW1|MED7_PICST Mediator of RNA polymerase II transcription...    32   2.4  
sp|A4VMX4|MNMC_PSEU5 tRNA 5-methylaminomethyl-2-thiouridine bios...    30   5.3  
sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small c...    30   6.8  
sp|Q8LDV3|Y4320_ARATH Uncharacterized protein At4g13200, chlorop...    30   9.0  

>sp|Q9LSD0|RIR2C_ARATH Ribonucleoside-diphosphate reductase small
           chain C OS=Arabidopsis thaliana GN=TSO2 PE=2 SV=1
          Length = 332

 Score = 33.1 bits (74), Expect = 0.80
 Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = +3

Query: 60  MIFNGDIANIKWQSQRSLIVSLACSNK--A*GFGNHCDYEKDLKT--NTTQARTRVKSLK 227
           + F+G   +I W  +R L+  L  SN+  +   G HCD+   L T   T  +  RVKS+ 
Sbjct: 171 IFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYTLLKTKLSEERVKSIV 230

Query: 228 LDDLPCLR*KKLICQSSAKRLEQGVKVGCPRSLTRQY 338
            D +   R  + +C +    L     VG  R L  QY
Sbjct: 231 CDAVEIER--EFVCDALPCAL-----VGMNRDLMSQY 260


>sp|A3LZW1|MED7_PICST Mediator of RNA polymerase II transcription
           subunit 7 OS=Pichia stipitis GN=MED7 PE=3 SV=2
          Length = 257

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
 Frame = +1

Query: 334 STAVGKLVKMSSAYP-------IMTRGRLQKLQEWQRERAKKMLEKSSQE 462
           STA G L+  SS YP         T   L KLQEWQR++  + +E   +E
Sbjct: 2   STANGDLI--SSLYPPPPVYVKFFTTENLNKLQEWQRQQNDEEIETKQEE 49


>sp|A4VMX4|MNMC_PSEU5 tRNA 5-methylaminomethyl-2-thiouridine
           biosynthesis bifunctional protein mnmC OS=Pseudomonas
           stutzeri (strain A1501) GN=mnmC PE=3 SV=1
          Length = 660

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +1

Query: 268 ARAAQRDSSKESR*AALALSQGSTAVGKLVKMSSAYPIMTRGRLQKLQEWQ 420
           A AAQ  S        L LS   TA+ KLV    +Y     G LQ+ Q+WQ
Sbjct: 295 ADAAQEGSGNPQGVLYLKLSAHGTALSKLVVGGFSYTRRLLGHLQQGQDWQ 345


>sp|Q9QTF2|RIR2_RSIV Ribonucleoside-diphosphate reductase small
           chain OS=Red sea bream iridovirus GN=RR-2 PE=3 SV=1
          Length = 312

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
 Frame = +3

Query: 60  MIFNGDIANIKWQSQRSLIVSLACSNK--A*GFGNHCDY 170
           ++F+G  A I W  +RSL+  LA SN+  +   G HCD+
Sbjct: 158 VMFSGSFAAIFWLKKRSLMPGLAFSNELISRDEGLHCDF 196


>sp|Q8LDV3|Y4320_ARATH Uncharacterized protein At4g13200,
           chloroplastic OS=Arabidopsis thaliana GN=At4g13200 PE=1
           SV=2
          Length = 185

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 14/45 (31%), Positives = 28/45 (62%)
 Frame = +1

Query: 337 TAVGKLVKMSSAYPIMTRGRLQKLQEWQRERAKKMLEKSSQEIME 471
           + VG+++     +    + ++Q++QE   ERAKK  E++++E ME
Sbjct: 92  STVGEVLSTIGKFQAEQQKQVQEIQEEVLERAKKAKERAARETME 136

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955857|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_D11, 5'
         (519 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4VRN3|B4VRN3_9CYAN Pyridine nucleotide-disulphide oxidoreduc...    35   1.7  
tr|A1CVG9|A1CVG9_NEOFI Serine/threonine-protein kinase, putative...    35   2.2  
tr|Q4XXC6|Q4XXC6_PLACH Putative uncharacterized protein OS=Plasm...    34   3.8  
tr|A2X9D4|A2X9D4_ORYSI Putative uncharacterized protein OS=Oryza...    34   5.0  
tr|Q6Z742|Q6Z742_ORYSJ Os02g0736600 protein OS=Oryza sativa subs...    33   6.5  
tr|A3AB55|A3AB55_ORYSJ Putative uncharacterized protein OS=Oryza...    33   6.5  

>tr|B4VRN3|B4VRN3_9CYAN Pyridine nucleotide-disulphide
           oxidoreductase, dimerisation domain protein
           OS=Microcoleus chthonoplastes PCC 7420 GN=MC7420_1327
           PE=4 SV=1
          Length = 556

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +1

Query: 343 VGKLVKMSSAYPIMTRGRLQKLQEWQRERAKKMLEKSSQEIMEIIFS 483
           VG L KMS A P M+    +  QEWQR+R +    K  Q ++E  F+
Sbjct: 507 VGSLAKMSQASPTMSEILYKTAQEWQRQRLES--NKMLQNLLESFFN 551


>tr|A1CVG9|A1CVG9_NEOFI Serine/threonine-protein kinase, putative
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_045660 PE=4 SV=1
          Length = 444

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 15/42 (35%), Positives = 30/42 (71%)
 Frame = +3

Query: 75  DIANIKWQSQRSLIVSLACSNKA*GFGNHCDYEKDLKTNTTQ 200
           DIA +KWQS+R++++ +  SN A    ++  +EK+++++ TQ
Sbjct: 71  DIARLKWQSERTVVLKIINSNNA----DNARHEKEIESHITQ 108


>tr|Q4XXC6|Q4XXC6_PLACH Putative uncharacterized protein OS=Plasmodium
            chabaudi GN=PC001061.02.0 PE=4 SV=1
          Length = 2102

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = +3

Query: 75   DIANIKWQSQRSLIVSLACSNKA*GFGNHCDYEKDLKT-------NTTQARTRVKSLKLD 233
            DI N K   Q +L     C++K     NH + EK L T       NT+    + ++L +D
Sbjct: 1956 DIINEKNDIQENL-----CNDKPEELNNHIE-EKTLPTLNINDEYNTSLNNNKKRTLNID 2009

Query: 234  DLPCLR*KKLICQS 275
            D P LR K+ IC+S
Sbjct: 2010 DNPSLRSKRKICES 2023


>tr|A2X9D4|A2X9D4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08853 PE=4 SV=1
          Length = 1260

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +1

Query: 328 QGSTAVGKLVKMSSAYPIMTRGRLQKLQEWQRERAKKMLEKSSQEIM 468
           QG    GK +K     P M++ +L+KLQ+ + E+ KK+L+  S EI+
Sbjct: 18  QGKDKDGKKIKED---PKMSKSKLKKLQKLEEEKQKKLLQAQSIEIL 61


>tr|Q6Z742|Q6Z742_ORYSJ Os02g0736600 protein OS=Oryza sativa subsp.
           japonica GN=P0487D09.24 PE=2 SV=1
          Length = 1272

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 328 QGSTAVGKLVKMSSAYPIMTRGRLQKLQEWQRERAKKMLEKSSQEIM 468
           QG    GK +K     P M++ +L+KLQ  + E+ KK+L+  S EI+
Sbjct: 18  QGKDKDGKKIKED---PKMSKSKLKKLQNLEEEKQKKLLQAQSIEIL 61


>tr|A3AB55|A3AB55_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_008027 PE=4 SV=1
          Length = 1259

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 18/47 (38%), Positives = 28/47 (59%)
 Frame = +1

Query: 328 QGSTAVGKLVKMSSAYPIMTRGRLQKLQEWQRERAKKMLEKSSQEIM 468
           QG    GK +K     P M++ +L+KLQ  + E+ KK+L+  S EI+
Sbjct: 18  QGKDKDGKKIKED---PKMSKSKLKKLQNLEEEKQKKLLQAQSIEIL 61