DK955865 [AcEST]

DK955865
Clone id	TST39A01NGRL0024_D20
Library	TST39
Length	605
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_D20. 5' end sequence.
Accession	DK955865
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	CATCGAGCTCACTTGCTTGCTGGCATGCAATCAAGGTCATCAGATCGAAGAGGGCTGCTC CGATGAAGCTGCATTGTTAGTCAGCGGATGCTGCTTCTTCATCATTGATGTTCAGTTCGG CCCGAGGTTACTTTAAGAGCCAGCACGTCCTGTATACCAGAAGGAATACTTGTGTATGCT TGGCTCTCTCAATATATCAGCATGGGCTAGCTTCTGGATGGGTACCAGTGATTGGATGCA GTTGTAGGCAGTCCTCCCATGGCTGCATCTGATTAGCAGTGCTTGTACATTCCTTAATTG TACTGGACGGATCTATTCAAAGCAGGAACTTCGTTGTAACATACAGCTTCGTGAGGTTGG TGGATGGTGAGGGATCACATTGTAGTGTAGTAATACCTAGCTCTTGCAGATAATTTTTGT AGCTGTGATGATAATTGATTAGTATGGATGCAAAGAAGTCCAAAGCAGGCCCTTTGGAGC TTCCTCCAGGAGTTGCAGCAGGTCCTAGTAATGGGCCAAAAGGAGACGTAGATGCTTCTA ACAGGAGTTTGAAGACTGGTGTCAGTTCTCTGGACAATATGCAGGAGAGTATAGGCAGAG TTTCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O08999
Definition	sp\|O08999\|LTBP2_MOUSE Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus
Align length	68
Score (bit)	31.6
E-value	3.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955865\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_D20, 5' (590 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O08999\|LTBP2_MOUSE Latent-transforming growth factor beta-bin... 32 3.1 >sp\|O08999\|LTBP2_MOUSE Latent-transforming growth factor beta-binding protein 2 OS=Mus musculus GN=Ltbp2 PE=1 SV=2 Length = 1813 Score = 31.6 bits (70), Expect = 3.1 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Frame = +3 Query: 60 C*SADAASSSLMFSSARGYFKSQ------HVLYTRRNTCVCLALSIYQHGLASGWVPVIG 221 C S D+ S + S +GY + +YT + CV ++ Q+G S VP Sbjct: 1443 CPSEDSVEFSQLCPSGQGYIPVEGAWTFGQTMYTDADECVLFGPALCQNGRCSNIVPGYI 1502 Query: 222 CSCRQSSH 245 C C H Sbjct: 1503 CLCNPGYH 1510
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B3M9C7
Definition	tr\|B3M9C7\|B3M9C7_DROAN GF23571 OS=Drosophila ananassae
Align length	50
Score (bit)	33.9
E-value	7.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955865\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_D20, 5' (590 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B3M9C7\|B3M9C7_DROAN GF23571 OS=Drosophila ananassae GN=GF2357... 34 7.1 >tr\|B3M9C7\|B3M9C7_DROAN GF23571 OS=Drosophila ananassae GN=GF23571 PE=4 SV=1 Length = 350 Score = 33.9 bits (76), Expect = 7.1 Identities = 21/50 (42%), Positives = 24/50 (48%) Frame = +3 Query: 426 SMDAKKSKAGPLELPPGVAAGPSNGPKGDVDASNRSLKTGVSSLDNMQES 575 S+ KK A P E P AAG PKG + +S K G NMQES Sbjct: 10 SVAKKKKAASPKEASPKGAAGKGGSPKGAAKGAGKSKKGGKK---NMQES 56