DK955872 |
Clone id |
TST39A01NGRL0024_E03 |
Library |
TST39 |
Length |
615 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_E03. 5' end sequence. |
Accession |
DK955872 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL953Contig1 |
Sequence |
GCTAACCATAATGGGGGAAGCCACAGAAGTTGATGTTGCCCCTTTGGCTACCCCTCCTGT AGAGCCTCCTAAAGCCCCTGAAGAACTCCCCAGCATTGAAGGGGCAGAGGAGAAGAAGAT TGTCACCCTTGATGATCCCACCGCCCCCGAAGAGGAGAAGGTAGTTGTCCCTGCTGCTGA TCGCGAGGTTAGCCCGCCCCCTTCTGTCGAAGAGGTCACCTCTCCCTTCATTGAAGAAAG CTACTATGTCAAAGACCTTAAGGACTCTGAGAAGAAGGCTCTTCAAGAGCTCAAGGCCAA AATTGAAGAGGCAATCAAGAACAACTCCTTCTTAGCGCCTCCTAAGCCAGTCCTCGAAGC TGCATCTAGGGAGATAGAGGCAGAGAAGAAGGAAGGAGAGGAAGAAGAGAAGGAGGAGAA GAAAGAAGCAGAGGAAGAGAAGGGAGAAGAAGCTGTAGACGTGAAGGAAGAAGTAGGAGT AGCGACCGAAGCAGTGACGGTAGCAACTGAGGAAGCACCAACTGAAACCAAGGAAGTAAA GGAAGAGGATGTTGTTGCACTGCCTGCGGAGACACCATCCAAAGGAGAGGATTCTCCTCT TCCAGCAGTGGAAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q56ZI2 |
Definition |
sp|Q56ZI2|PATL2_ARATH Patellin-2 OS=Arabidopsis thaliana |
Align length |
112 |
Score (bit) |
48.5 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QLX0 |
Definition |
tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
116 |
Score (bit) |
56.2 |
E-value |
1.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955872|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_E03, 5' (615 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole geno... 56 1e-06 tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06 tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|Q2PF01|Q2PF01_TRIPR Putative cytosolic factor OS=Trifolium pr... 51 6e-05 tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea... 49 2e-04 tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=... 49 3e-04 tr|Q652I7|Q652I7_ORYSJ Os06g0671800 protein OS=Oryza sativa subs... 48 4e-04 tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea m... 48 4e-04 tr|A2YG28|A2YG28_ORYSI Putative uncharacterized protein OS=Oryza... 48 4e-04 tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequen... 48 5e-04 tr|Q5N8X1|Q5N8X1_ORYSJ Cytosolic factor-like protein OS=Oryza sa... 48 5e-04 tr|A7Q4T0|A7Q4T0_VITVI Chromosome chr10 scaffold_50, whole genom... 48 5e-04 tr|A5BW68|A5BW68_VITVI Putative uncharacterized protein OS=Vitis... 48 5e-04 tr|A3A041|A3A041_ORYSJ Putative uncharacterized protein OS=Oryza... 48 5e-04 tr|A7QD42|A7QD42_VITVI Chromosome undetermined scaffold_80, whol... 44 0.006 tr|A5BL92|A5BL92_VITVI Putative uncharacterized protein OS=Vitis... 44 0.006 tr|A2WXH7|A2WXH7_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.007 tr|B6TVE3|B6TVE3_MAIZE Patellin-1 OS=Zea mays PE=2 SV=1 42 0.022 tr|B8AYI6|B8AYI6_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.028 tr|B6TB19|B6TB19_MAIZE Patellin-5 OS=Zea mays PE=2 SV=1 42 0.028 tr|A2ZUF5|A2ZUF5_ORYSJ Peptidyl-prolyl cis-trans isomerase OS=Or... 42 0.028 tr|Q5TKJ2|Q5TKJ2_ORYSJ Os05g0429400 protein OS=Oryza sativa subs... 42 0.037 tr|A7PKK5|A7PKK5_VITVI Chromosome chr7 scaffold_20, whole genome... 38 0.41 tr|A4XPB5|A4XPB5_PSEMY CheA signal transduction histidine kinase... 38 0.54 tr|B4UL60|B4UL60_ANASK Putative uncharacterized protein OS=Anaer... 37 0.91 tr|A7QLW9|A7QLW9_VITVI Chromosome chr18 scaffold_122, whole geno... 37 0.91 tr|A2Q9W9|A2Q9W9_ASPNC Contig An01c0310, complete genome OS=Aspe... 37 0.91 tr|B6H2C8|B6H2C8_PENCH Pc13g04790 protein OS=Penicillium chrysog... 37 1.2 tr|Q5P1M1|Q5P1M1_AZOSE Pseudouridine synthase OS=Azoarcus sp. (s... 36 1.6 tr|A4VZ16|A4VZ16_STRS2 Uncharacterized protein conserved in bact... 36 1.6
>tr|A7QLX0|A7QLX0_VITVI Chromosome chr18 scaffold_122, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001819001 PE=4 SV=1 Length = 606
Score = 56.2 bits (134), Expect = 1e-06 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Frame = +2
Query: 29 VDVAPLATPPVEPPKAPEELPSIEGAEEKKIVTLDDPTAPEEEKV-VVPAADRXXXXXXX 205 V VA + PP P+A E ++ EE ++ A EEEK VV ++ Sbjct: 27 VAVAEVTAPPPAVPEAEEAAEKLKEEEEVVEKLEEEVAAAEEEKPKVVEEGEKMTESVS- 85
Query: 206 XXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKPVLEAASRE 373 F EES V DL +S++KAL+ELK + EA++ + F APP P A E Sbjct: 86 -------FKEESNVVGDLPESQRKALEELKVLVREALEKHEFTAPPPPPPPPAKEE 134
>tr|A5ASS1|A5ASS1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013163 PE=4 SV=1 Length = 595
Score = 56.2 bits (134), Expect = 1e-06 Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Frame = +2
Query: 29 VDVAPLATPPVEPPKAPEELPSIEGAEEKKIVTLDDPTAPEEEKV-VVPAADRXXXXXXX 205 V VA + PP P+A E ++ EE ++ A EEEK VV ++ Sbjct: 27 VAVAEVTAPPPAVPEAEEAAEKLKEEEEVVEKLEEEVAAAEEEKPKVVEEGEKMTESVS- 85
Query: 206 XXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKPVLEAASRE 373 F EES V DL +S++KAL+ELK + EA++ + F APP P A E Sbjct: 86 -------FKEESNVVGDLPESQRKALEELKVLVREALEKHEFTAPPPPPPPPAKEE 134
>tr|A5ASS0|A5ASS0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013162 PE=4 SV=1 Length = 591
Score = 52.4 bits (124), Expect = 2e-05 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 16/126 (12%) Frame = +2
Query: 20 ATEVDVAP----LATPPVEPPK--APEELPSIEGA----------EEKKIVTLDDPTAPE 151 A E D AP LA V PP+ AP E + E EK++ P PE Sbjct: 2 ADETDAAPPPTLLAAASVVPPETAAPPETAASEEVLTVLDVAPPVTEKEVSPQKPPPPPE 61
Query: 152 EEKVVVPAADRXXXXXXXXXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSF 331 E VV + + F EES + DL +SE++AL+ELK ++EA++N F Sbjct: 62 EVVAVVDSEKKVPQNLVS-------FKEESNRLADLSESERRALEELKQSVQEALRNGIF 114
Query: 332 LAPPKP 349 + P+P Sbjct: 115 TSQPQP 120
>tr|Q2PF01|Q2PF01_TRIPR Putative cytosolic factor OS=Trifolium pratense PE=2 SV=1 Length = 607
Score = 50.8 bits (120), Expect = 6e-05 Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 7/129 (5%) Frame = +2
Query: 11 MGEATEVDVAPLATPPVEPPKAPEELP-----SIEGAEEKKIVTLDDPTAPEEEKVV--V 169 M E + +AT P E+ P + A + V + A E EK V Sbjct: 1 MAEEPQKPTEQVATTPATSETTIEKTPPPQAEEVVAAADADAVVVPPVVAEETEKPAEDV 60
Query: 170 PAADRXXXXXXXXXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKP 349 AD F EE+ V +L +S+KKAL ELK I+EA+ + F APP P Sbjct: 61 KPADETAAATDKKILQSVSFKEETNVVSELPESQKKALDELKQLIQEALNKHEFTAPPPP 120
Query: 350 VLEAASREI 376 A E+ Sbjct: 121 PPTKAVAEV 129
>tr|B8LQX3|B8LQX3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 592
Score = 49.3 bits (116), Expect = 2e-04 Identities = 24/35 (68%), Positives = 28/35 (80%) Frame = +2
Query: 227 FIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSF 331 F EES +V DLK+SE+KALQELK +IEEAI N F Sbjct: 75 FKEESNFVSDLKESERKALQELKCRIEEAILKNEF 109
>tr|Q2Q0V7|Q2Q0V7_CUCPE Patellin 1 OS=Cucurbita pepo GN=PATL1 PE=2 SV=1 Length = 604
Score = 48.5 bits (114), Expect = 3e-04 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%) Frame = +2
Query: 20 ATEVDVAPLATPPVEPPKAPEELPSI-EGAEEKKIVTLDDPTAPEEEKVVVPAADRXXXX 196 A E+ + A P +P +P + S+ E AE++K P A EE + + + Sbjct: 33 AAEIQLPDSAPAPPQPEASPAKPDSVAEVAEDEK------PKASEEFEKISQSVS----- 81
Query: 197 XXXXXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKPV 352 F EES V +L +S++KAL +LK I+EA+ + F APP P+ Sbjct: 82 ----------FKEESNVVGELPESQRKALADLKVLIQEALNKHEFTAPPAPL 123
>tr|Q652I7|Q652I7_ORYSJ Os06g0671800 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032M14.14 PE=4 SV=1 Length = 517
Score = 48.1 bits (113), Expect = 4e-04 Identities = 28/75 (37%), Positives = 38/75 (50%) Frame = +2
Query: 92 SIEGAEEKKIVTLDDPTAPEEEKVVVPAADRXXXXXXXXXXXXXXFIEESYYVKDLKDSE 271 ++E E + APE ++V AA F EES ++ DLKD E Sbjct: 2 AVEVVSEGAAAAAAEVAAPETKEVTAKAAADEAVTLAAVVSKNASFREESNFLDDLKDGE 61
Query: 272 KKALQELKAKIEEAI 316 +KAL EL+AK+EEAI Sbjct: 62 RKALAELRAKVEEAI 76
>tr|B4FBC9|B4FBC9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 620
Score = 48.1 bits (113), Expect = 4e-04 Identities = 38/121 (31%), Positives = 48/121 (39%), Gaps = 4/121 (3%) Frame = +2
Query: 23 TEVDVAPLATPPVEPPKAPE----ELPSIEGAEEKKIVTLDDPTAPEEEKVVVPAADRXX 190 TE + T PV KA E + E E+K D EEEK A + Sbjct: 19 TEEEKKAEETAPVAEEKAVEAAVEKAAEAEAGAEEKAAEADS----EEEKKAEEAEEAAA 74
Query: 191 XXXXXXXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKPVLEAASR 370 F EES V +L D E+ AL +LK + A+ N F PP P E A + Sbjct: 75 GDEAAVIDGTGSFKEESNLVSELPDPERTALAQLKELVATALANGEFNLPPPPAKEEAKK 134
Query: 371 E 373 E Sbjct: 135 E 135
>tr|A2YG28|A2YG28_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24074 PE=4 SV=1 Length = 517
Score = 48.1 bits (113), Expect = 4e-04 Identities = 28/75 (37%), Positives = 38/75 (50%) Frame = +2
Query: 92 SIEGAEEKKIVTLDDPTAPEEEKVVVPAADRXXXXXXXXXXXXXXFIEESYYVKDLKDSE 271 ++E E + APE ++V AA F EES ++ DLKD E Sbjct: 2 AVEVVSEGAAAAAAEVAAPETKEVTAKAAADEAVTLAAVVSKNASFREESNFLDDLKDGE 61
Query: 272 KKALQELKAKIEEAI 316 +KAL EL+AK+EEAI Sbjct: 62 RKALAELRAKVEEAI 76
>tr|Q8RYZ1|Q8RYZ1_ORYSJ cDNA clone:J033015J08, full insert sequence OS=Oryza sativa subsp. japonica GN=P0648C09.9 PE=2 SV=1 Length = 613
Score = 47.8 bits (112), Expect = 5e-04 Identities = 38/116 (32%), Positives = 47/116 (40%), Gaps = 3/116 (2%) Frame = +2
Query: 11 MGEATEVDVAPLATPPVEPPKAPEELPSIEGAEEKKI---VTLDDPTAPEEEKVVVPAAD 181 M E + + AP A E+ P +E +EKK+ + A EE+K AA Sbjct: 1 MAEEPQPEAAPAAVAATTEVAVAEKAP-VEAEKEKKVEEETPAVEAEAKEEKKDEAAAAA 59
Query: 182 RXXXXXXXXXXXXXXFIEESYYVKDLKDSEKKALQELKAKIEEAIKNNSFLAPPKP 349 F EES V DL D EKKAL E K I A+ F PP P Sbjct: 60 AAGGDEAGAIEGTGSFKEESNLVADLPDPEKKALDEFKQLIAAALAACEFNLPPPP 115
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