DK955878 |
Clone id |
TST39A01NGRL0024_E10 |
Library |
TST39 |
Length |
607 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_E10. 5' end sequence. |
Accession |
DK955878 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCTTTTCTTGCCTGCCTTGGTGGTGGGAGACGATCATATAGTTGGAGCCAACCATGGGTG GCAAGTGCCTGCAGAGGCCGGCGTGGATCTGAACTATTCAACGTGGGCGACCAATGAGAC GTTCTACCTGGGGGACTTCATCTCCTTTCATTACCAGAAGGGGCTGCACACGGTGTACGA AGTGAACAGGAGCGTGTATGAGAGCTGCGATTTCGGCAATGGCGGCAGCCCGAGTGCAGA GGAGTTGTGGGGAGGTGGGGTCGCGGCCACCATAGATAAGACGAGTGTGATACACAACTG GTCGACGAAGGGCGGACGTAGCATCGTGCCGCTGAACGAGAGCCGCGTTTACTACTTTGC ATGCGGCGTGGGGCAGCATTGCCTGCAAGGTATGAAGGTGGCGGTGTCTGTGCTTCCCAC CACGTCCTCCAATTCCCCGCTTTCAGCCCAACAACAATCTTCTAATTATTACCCCCACTC CTCTTCCTCCCCGGCCCTTCAGTACTGCCCCCTTTCTCCCTTGATCTATCTCTGTCTCGT CCTATGCATGCATGTATTATCGGGCAACACCTTTGCGAATTGTGCACAATTTCCTCTCTT GTATTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q41001 |
Definition |
sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum |
Align length |
138 |
Score (bit) |
74.7 |
E-value |
3.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6TEY9 |
Definition |
tr|B6TEY9|B6TEY9_MAIZE Blue copper protein OS=Zea mays |
Align length |
131 |
Score (bit) |
110.0 |
E-value |
5.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955878|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_E10, 5' (607 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6TEY9|B6TEY9_MAIZE Blue copper protein OS=Zea mays PE=2 SV=1 110 5e-23 tr|Q653S5|Q653S5_ORYSJ Os09g0557900 protein OS=Oryza sativa subs... 109 1e-22 tr|A2Z3Z7|A2Z3Z7_ORYSI Putative uncharacterized protein OS=Oryza... 109 1e-22 tr|B8Y8A0|B8Y8A0_GOSHI Blue copper-like protein OS=Gossypium hir... 105 2e-21 tr|A9PBE8|A9PBE8_POPTR Putative uncharacterized protein OS=Popul... 93 1e-17 tr|A7QFZ0|A7QFZ0_VITVI Chromosome chr9 scaffold_90, whole genome... 93 1e-17 tr|A5BZ10|A5BZ10_VITVI Putative uncharacterized protein OS=Vitis... 93 1e-17 tr|A7PN14|A7PN14_VITVI Chromosome chr14 scaffold_21, whole genom... 86 2e-15 tr|A9P8L1|A9P8L1_POPTR Putative uncharacterized protein OS=Popul... 82 2e-14 tr|A7PLR0|A7PLR0_VITVI Chromosome chr14 scaffold_21, whole genom... 82 3e-14 tr|Q2HW94|Q2HW94_MEDTR Blue (Type 1) copper domain OS=Medicago t... 81 4e-14 tr|A9P9Z8|A9P9Z8_POPTR Putative uncharacterized protein OS=Popul... 81 4e-14 tr|A9P8Q2|A9P8Q2_POPTR Putative uncharacterized protein OS=Popul... 81 4e-14 tr|A9PAA9|A9PAA9_POPTR Putative uncharacterized protein OS=Popul... 79 3e-13 tr|A5C3C3|A5C3C3_VITVI Putative uncharacterized protein OS=Vitis... 79 3e-13 tr|Q3E6W6|Q3E6W6_ARATH Early nodulin-like protein 20 OS=Arabidop... 78 3e-13 tr|A7PK91|A7PK91_VITVI Chromosome chr15 scaffold_19, whole genom... 78 5e-13 tr|A5BXA8|A5BXA8_VITVI Putative uncharacterized protein OS=Vitis... 77 1e-12 tr|A5BRT6|A5BRT6_VITVI Putative uncharacterized protein OS=Vitis... 77 1e-12 tr|B7FMK9|B7FMK9_MEDTR Putative uncharacterized protein OS=Medic... 76 1e-12 tr|B7FHG1|B7FHG1_MEDTR Putative uncharacterized protein OS=Medic... 76 1e-12 tr|B7FGF6|B7FGF6_MEDTR Putative uncharacterized protein OS=Medic... 76 1e-12 tr|Q2HWC3|Q2HWC3_MEDTR Blue (Type 1) copper domain OS=Medicago t... 76 2e-12 tr|A7PF66|A7PF66_VITVI Chromosome chr11 scaffold_13, whole genom... 76 2e-12 tr|Q2R428|Q2R428_ORYSJ Plastocyanin-like domain containing prote... 75 3e-12 tr|A2ZEE2|A2ZEE2_ORYSI Putative uncharacterized protein OS=Oryza... 75 3e-12 tr|A7PF65|A7PF65_VITVI Chromosome chr11 scaffold_13, whole genom... 74 5e-12 tr|Q96403|Q96403_CUCSA Stellacyanin OS=Cucumis sativus PE=2 SV=1 74 7e-12 tr|A9P1G7|A9P1G7_PICSI Putative uncharacterized protein OS=Picea... 74 7e-12 tr|Q8LED5|Q8LED5_ARATH Blue copper protein, putative OS=Arabidop... 74 9e-12
>tr|B6TEY9|B6TEY9_MAIZE Blue copper protein OS=Zea mays PE=2 SV=1 Length = 168
Score = 110 bits (276), Expect = 5e-23 Identities = 60/131 (45%), Positives = 76/131 (58%) Frame = +2
Query: 26 GDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEVNRSVYES 205 G DHIVGANHGW ++NYS W+ N+TFY+GD ISF YQKG H V+EVN + Y++ Sbjct: 20 GTDHIVGANHGWNP------NINYSLWSGNQTFYVGDLISFRYQKGTHNVFEVNETGYDN 73
Query: 206 CDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQHCL 385 C GVA NW++ G+ +PL +R YYF CG G CL Sbjct: 74 CTM-------------AGVAG---------NWTS--GKDFIPLPAARRYYFVCGNG-FCL 108
Query: 386 QGMKVAVSVLP 418 QGMKVA++V P Sbjct: 109 QGMKVAITVHP 119
>tr|Q653S5|Q653S5_ORYSJ Os09g0557900 protein OS=Oryza sativa subsp. japonica GN=OJ1065_E04.1 PE=2 SV=1 Length = 168
Score = 109 bits (272), Expect = 1e-22 Identities = 60/138 (43%), Positives = 79/138 (57%) Frame = +2
Query: 5 FLPALVVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEV 184 F +L DHIVGANHGW +++YS W+ N+TFY+GD ISF YQKG H V+EV Sbjct: 14 FAVSLAGATDHIVGANHGWNP------NIDYSLWSGNQTFYVGDLISFRYQKGTHNVFEV 67
Query: 185 NRSVYESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFAC 364 N++ Y++C GVA NW++ G+ +PLN+SR YYF C Sbjct: 68 NQTGYDNCTM-------------AGVAG---------NWTS--GKDFIPLNDSRRYYFIC 103
Query: 365 GVGQHCLQGMKVAVSVLP 418 G G C GMKVA++V P Sbjct: 104 GNG-FCQAGMKVAITVHP 120
>tr|A2Z3Z7|A2Z3Z7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_32362 PE=4 SV=1 Length = 168
Score = 109 bits (272), Expect = 1e-22 Identities = 60/138 (43%), Positives = 79/138 (57%) Frame = +2
Query: 5 FLPALVVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEV 184 F +L DHIVGANHGW +++YS W+ N+TFY+GD ISF YQKG H V+EV Sbjct: 14 FAVSLAGATDHIVGANHGWNP------NIDYSLWSGNQTFYVGDLISFRYQKGTHNVFEV 67
Query: 185 NRSVYESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFAC 364 N++ Y++C GVA NW++ G+ +PLN+SR YYF C Sbjct: 68 NQTGYDNCTM-------------AGVAG---------NWTS--GKDFIPLNDSRRYYFIC 103
Query: 365 GVGQHCLQGMKVAVSVLP 418 G G C GMKVA++V P Sbjct: 104 GNG-FCQAGMKVAITVHP 120
>tr|B8Y8A0|B8Y8A0_GOSHI Blue copper-like protein OS=Gossypium hirsutum GN=BCP2 PE=2 SV=1 Length = 173
Score = 105 bits (262), Expect = 2e-21 Identities = 60/149 (40%), Positives = 78/149 (52%) Frame = +2
Query: 2 LFLPALVVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYE 181 L + V DHIVGAN GW +NY+ WA N+TFY+GD ISF YQK + V+E Sbjct: 17 LLIFGTVTATDHIVGANKGWNP------GINYTLWANNQTFYVGDLISFRYQKTQYNVFE 70
Query: 182 VNRSVYESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFA 361 VN++ Y+SC + NWS+ G+ +PLNES+ YYF Sbjct: 71 VNQTGYDSC----------------------TTEGAVGNWSS--GKDFIPLNESKRYYFI 106
Query: 362 CGVGQHCLQGMKVAVSVLPTTSSNSPLSA 448 CG GQ C GMKV+V V P S + +A Sbjct: 107 CGNGQ-CFNGMKVSVVVHPLPSPTASPAA 134
>tr|A9PBE8|A9PBE8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 172
Score = 92.8 bits (229), Expect = 1e-17 Identities = 52/139 (37%), Positives = 70/139 (50%) Frame = +2
Query: 2 LFLPALVVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYE 181 LF DHIVGAN GW +NY+ WA N TFY+GD ISF YQK + V+E Sbjct: 16 LFSAIATTATDHIVGANKGWNP------GINYTHWANNHTFYVGDLISFRYQKTQYNVFE 69
Query: 182 VNRSVYESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFA 361 VN++ Y++C + NW++ G+ +PLN+++ YYF Sbjct: 70 VNQTGYDNC----------------------TTEGAVGNWTS--GKDFIPLNKAKRYYFI 105
Query: 362 CGVGQHCLQGMKVAVSVLP 418 G GQ C GMKV + V P Sbjct: 106 GGNGQ-CFNGMKVTILVHP 123
>tr|A7QFZ0|A7QFZ0_VITVI Chromosome chr9 scaffold_90, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037622001 PE=4 SV=1 Length = 168
Score = 92.8 bits (229), Expect = 1e-17 Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 2/145 (1%) Frame = +2
Query: 20 VVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEVNRSVY 199 V DHIVGAN GW +NY+ WA N TFY+ D ISF YQK + V+EVN++ Y Sbjct: 18 VTATDHIVGANRGWNP------GINYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGY 71
Query: 200 ESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQH 379 ++C T D S NWS+ G+ + L++++ YYF CG G Sbjct: 72 DNC--------------------TTD--SATGNWSS--GKDFILLDKAKRYYFICGNG-G 106
Query: 380 CLQGMKVAVSV--LPTTSSNSPLSA 448 C GMKV+V V LPT S S +A Sbjct: 107 CFSGMKVSVLVHPLPTPPSASTAAA 131
>tr|A5BZ10|A5BZ10_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028080 PE=4 SV=1 Length = 168
Score = 92.8 bits (229), Expect = 1e-17 Identities = 58/145 (40%), Positives = 76/145 (52%), Gaps = 2/145 (1%) Frame = +2
Query: 20 VVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEVNRSVY 199 V DHIVGAN GW +NY+ WA N TFY+ D ISF YQK + V+EVN++ Y Sbjct: 18 VTATDHIVGANRGWNP------GMNYTLWANNHTFYVNDLISFRYQKNQYNVFEVNQTGY 71
Query: 200 ESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQH 379 ++C T D S NWS+ G+ + L++++ YYF CG G Sbjct: 72 DNC--------------------TTD--SATGNWSS--GKDFILLDKAKRYYFICGNG-G 106
Query: 380 CLQGMKVAVSV--LPTTSSNSPLSA 448 C GMKV+V V LPT S S +A Sbjct: 107 CFSGMKVSVLVHPLPTPPSASTAAA 131
>tr|A7PN14|A7PN14_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021025001 PE=4 SV=1 Length = 171
Score = 85.5 bits (210), Expect = 2e-15 Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 2/136 (1%) Frame = +2
Query: 41 VGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEVNRSVYESCDFGN 220 VG N GW ++NY+ WA ++ FY GD++ F Y + V EVN + YESC N Sbjct: 30 VGGNQGWST------NVNYTVWAKDKHFYNGDWLFFVYDRNQMNVLEVNETNYESC---N 80
Query: 221 GGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQHCLQGMKV 400 P +HNW+T GR +VPLN +R YYF G G C GMK+ Sbjct: 81 SDHP-------------------LHNWTTGAGRDVVPLNVTRKYYFLSGKG-FCYSGMKI 120
Query: 401 AVSV--LPTTSSNSPL 442 A++V P S SP+ Sbjct: 121 AINVENPPPPPSASPI 136
>tr|A9P8L1|A9P8L1_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 188
Score = 82.0 bits (201), Expect = 2e-14 Identities = 51/143 (35%), Positives = 71/143 (49%) Frame = +2
Query: 20 VVGDDHIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEVNRSVY 199 ++ DH VG + GW + ++YSTW + +TF +GD + F+Y G HTV EV+ S Y Sbjct: 23 ILAKDHTVGDSSGW------AIGMDYSTWTSGKTFSVGDSLVFNYGGG-HTVDEVSASDY 75
Query: 200 ESCDFGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQH 379 +C GN A T D + G + + L + +YF CGV H Sbjct: 76 STCTTGN--------------AITSDSS----------GATTIALKTAGTHYFICGVPGH 111
Query: 380 CLQGMKVAVSVLPTTSSNSPLSA 448 C GMKVAV+V SS SP S+ Sbjct: 112 CGSGMKVAVTVAAAGSSTSPSSS 134
>tr|A7PLR0|A7PLR0_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020533001 PE=4 SV=1 Length = 176
Score = 81.6 bits (200), Expect = 3e-14 Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 1/136 (0%) Frame = +2
Query: 35 HIVGANHGWQVPAEAGVDLNYSTWATNETFYLGDFISFHYQKGLHTVYEV-NRSVYESCD 211 H+VG + GW ++ YS WA+ +TF +GD + F Y GLH+V E+ N S Y++CD Sbjct: 26 HVVGGSQGWDESSD------YSKWASGQTFEVGDQLVFKYTPGLHSVVELPNESAYKNCD 79
Query: 212 FGNGGSPSAEELWGGGVAATIDKTSVIHNWSTKGGRSIVPLNESRVYYFACGVGQHCLQG 391 G+ + S G ++V L+++ YFACG HC QG Sbjct: 80 VGSALN------------------------SMNSGNNVVKLSKAGTRYFACGTIGHCDQG 115
Query: 392 MKVAVSVLPTTSSNSP 439 MK+ VS + +S+SP Sbjct: 116 MKLKVSTVSADASSSP 131
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