DK955881 |
Clone id |
TST39A01NGRL0024_E13 |
Library |
TST39 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_E13. 5' end sequence. |
Accession |
DK955881 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL57Contig1 |
Sequence |
CGCAGCCATCTCCTCCTCCTCTTTTGCCGATGTCTCGGCTAAATTATGTTTCTCCTCTTC TTCCTCCGTTTCTGGCTCTCGCCTTTGCGCACCTGTCTCTCTAACGGTTCCTTCCTCCCG CGCCCGCTCGTCGTCCGTGTCTGCTGCACTGTATTCTGATTCCTCATATGACCTTTCCTC CTTCAAGTTTGAGCCCATTCGGGAATCCATTGTTGCCCGTGAGATGACCCGCCGCTACAT GACAGACATGATCACCCATGCAGACACTGATGTTGTGGTTGTGGGTGCTGGTTCTGCTGG CCTGTCATGTGCGTATGAGCTCAGCAAGAACCCCAACGTCAAGGTTGCCATTGTGGAGCA GTCTGTAAGCCCAGGTGGTGGAGCTTGGCTCGGTGGGCAGCTCTTCTCTGCCATGATTGT AAGGAAGCCAGCCCACCTCTTCCTTGATGAGATTGGTGTGCCCTACGATGAGAAGGATAC CTATGTTGTTATCAAGCATGCTGCGCTCTTCACATCCACCATCATGAGCAAGCTTCTGGC CAGGCCCAATGTGAAGCTCTTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O23787 |
Definition |
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis |
Align length |
127 |
Score (bit) |
228.0 |
E-value |
2.0e-59 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955881|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_E13, 5' (563 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic... 228 2e-59 sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic... 224 2e-58 sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloropl... 219 6e-57 sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloropl... 216 5e-56 sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic... 211 2e-54 sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial... 173 5e-43 sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial... 173 6e-43 sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial... 169 1e-41 sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial... 168 1e-41 sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial... 166 1e-40 sp|Q9UVF8|THI4_UROFA Thiazole biosynthetic enzyme, mitochondrial... 157 3e-38 sp|O59082|THI4_PYRHO Putative thiazole biosynthetic enzyme OS=Py... 77 6e-14 sp|Q9WZP4|THI4_THEMA Putative thiazole biosynthetic enzyme OS=Th... 76 1e-13 sp|Q9V0J8|THI4_PYRAB Putative thiazole biosynthetic enzyme OS=Py... 74 4e-13 sp|Q8U0Q5|THI4_PYRFU Putative thiazole biosynthetic enzyme OS=Py... 72 1e-12 sp|Q9HMC7|THI4_HALSA Putative thiazole biosynthetic enzyme OS=Ha... 72 2e-12 sp|Q18KP1|THI4_HALWD Putative thiazole biosynthetic enzyme OS=Ha... 71 3e-12 sp|Q5JD25|THI4_PYRKO Putative thiazole biosynthetic enzyme OS=Py... 69 1e-11 sp|O27657|THI4_METTH Putative thiazole biosynthetic enzyme OS=Me... 66 1e-10 sp|Q9Y9Z0|THI4_AERPE Putative thiazole biosynthetic enzyme OS=Ae... 65 3e-10 sp|Q8TM19|THI4_METAC Putative thiazole biosynthetic enzyme OS=Me... 62 1e-09 sp|A3CXS4|THI4_METMJ Putative thiazole biosynthetic enzyme OS=Me... 62 2e-09 sp|Q8Q0B5|THI4_METMA Putative thiazole biosynthetic enzyme OS=Me... 61 3e-09 sp|Q3V7Z9|THI4_HALMA Putative thiazole biosynthetic enzyme OS=Ha... 61 4e-09 sp|Q46AR1|THI4_METBF Putative thiazole biosynthetic enzyme OS=Me... 60 1e-08 sp|Q4JAF8|THI4_SULAC Putative thiazole biosynthetic enzyme OS=Su... 59 1e-08 sp|O29556|THI4_ARCFU Putative thiazole biosynthetic enzyme OS=Ar... 59 1e-08 sp|Q97ZY5|THI4_SULSO Putative thiazole biosynthetic enzyme OS=Su... 59 2e-08 sp|Q3IMI0|THI4_NATPD Putative thiazole biosynthetic enzyme OS=Na... 58 3e-08 sp|Q6LXJ8|THI4_METMP Putative thiazole biosynthetic enzyme OS=Me... 58 4e-08
>sp|O23787|THI4_CITSI Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1 Length = 356
Score = 228 bits (580), Expect = 2e-59 Identities = 108/127 (85%), Positives = 121/127 (95%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 FKF+PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSKNPN+++AI+EQ Sbjct: 63 FKFDPIKESIVSREMTRRYMTDMITYADTDVVVVGAGSAGLSCAYELSKNPNIQIAIIEQ 122
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VRKPAH+FLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 123 SVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVIKHAALFTSTIMSKLLA 182
Query: 542 RPNVKLF 562 RPNVKLF Sbjct: 183 RPNVKLF 189
>sp|Q38814|THI4_ARATH Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1 Length = 349
Score = 224 bits (571), Expect = 2e-58 Identities = 110/127 (86%), Positives = 120/127 (94%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F F+PI+ESIV+REMTRRYMTDMIT+A+TD GAGSAGLS AYE+SKNPNV+VAI+EQ Sbjct: 56 FTFDPIKESIVSREMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQ 115
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGV YDE+DTYVV+KHAALFTSTIMSKLLA Sbjct: 116 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHAALFTSTIMSKLLA 175
Query: 542 RPNVKLF 562 RPNVKLF Sbjct: 176 RPNVKLF 182
>sp|Q41739|THI42_MAIZE Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1 Length = 354
Score = 219 bits (559), Expect = 6e-57 Identities = 106/127 (83%), Positives = 117/127 (92%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F+F PI+ESIV+REMTRRYMTDMITHADTD GAGSAGLSCAYELSK+P V VAIVEQ Sbjct: 59 FRFSPIKESIVSREMTRRYMTDMITHADTDVVIVGAGSAGLSCAYELSKDPTVSVAIVEQ 118
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VR+PAHLFLDE+GV YDE + YVV+KHAALFTST+MS+LLA Sbjct: 119 SVSPGGGAWLGGQLFSAMVVRRPAHLFLDELGVGYDEAEDYVVVKHAALFTSTVMSRLLA 178
Query: 542 RPNVKLF 562 RPNVKLF Sbjct: 179 RPNVKLF 185
>sp|Q41738|THI41_MAIZE Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1 Length = 354
Score = 216 bits (551), Expect = 5e-56 Identities = 106/127 (83%), Positives = 116/127 (91%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F+F PI+ESIV+REMTRRYMTDMIT+ADTD GAGSAGLSCAYELSK+P V +AIVEQ Sbjct: 62 FRFSPIKESIVSREMTRRYMTDMITYADTDVVIVGAGSAGLSCAYELSKDPAVSIAIVEQ 121
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFSAM+VRKPAHLFLDE+GV YDE + YVVIKHAALFTST+MS LLA Sbjct: 122 SVSPGGGAWLGGQLFSAMVVRKPAHLFLDELGVAYDEAEDYVVIKHAALFTSTVMSLLLA 181
Query: 542 RPNVKLF 562 RPNVKLF Sbjct: 182 RPNVKLF 188
>sp|Q38709|THI4_ALNGL Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1 Length = 352
Score = 211 bits (538), Expect = 2e-54 Identities = 104/127 (81%), Positives = 116/127 (91%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKNPNVKVAIVEQ 361 F F+PI+ESIV+REMTRRYM DMIT+ADTD GAGS+GL C YELSKNP+V+VAI+EQ Sbjct: 60 FTFDPIKESIVSREMTRRYMMDMITYADTDVVVVGAGSSGLVC-YELSKNPSVQVAIIEQ 118
Query: 362 SVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLLA 541 SVSPGGGAWLGGQLFS M+VRKPAHLFLDE+G+ YDE+D YVVIKHAALFTSTIMSKLLA Sbjct: 119 SVSPGGGAWLGGQLFSGMVVRKPAHLFLDELGIEYDEQDNYVVIKHAALFTSTIMSKLLA 178
Query: 542 RPNVKLF 562 RPNVKLF Sbjct: 179 RPNVKLF 185
>sp|P23618|THI4_FUSOX Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2 Length = 320
Score = 173 bits (439), Expect = 5e-43 Identities = 86/128 (67%), Positives = 103/128 (80%), Gaps = 1/128 (0%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L K P++K+AI+E Sbjct: 44 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIIGAGSCGLSAAYILGKKRPDLKIAIIE 103
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SVSPGGGAWLGGQLFSAMI+RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 104 ASVSPGGGAWLGGQLFSAMIMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 163
Query: 539 ARPNVKLF 562 PN+KLF Sbjct: 164 QMPNIKLF 171
>sp|P40998|THI2_SCHPO Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2 Length = 328
Score = 173 bits (438), Expect = 6e-43 Identities = 83/128 (64%), Positives = 107/128 (83%), Gaps = 1/128 (0%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYEL-SKNPNVKVAIVE 358 F F PIRES V+R MTRRY +D+ +A++D GAGSAGL+ AY + ++ P++K+AI+E Sbjct: 49 FSFAPIRESTVSRAMTRRYFSDLDKYAESDIVIVGAGSAGLTAAYYIGTRRPDLKIAIIE 108
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SV+PGGGAWLGGQLFSAM+VRKPA LFL+EIGVPY+++ YVV+KHAALFTST+M++ L Sbjct: 109 ASVAPGGGAWLGGQLFSAMVVRKPADLFLNEIGVPYEDEGDYVVVKHAALFTSTVMARTL 168
Query: 539 ARPNVKLF 562 A PNVKLF Sbjct: 169 ALPNVKLF 176
>sp|P23617|THI4_FUSSH Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1 Length = 324
Score = 169 bits (427), Expect = 1e-41 Identities = 84/128 (65%), Positives = 101/128 (78%), Gaps = 1/128 (0%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS Y L K P++K+AI+E Sbjct: 48 FKFAPIRESQVSRAMTRRYFQDLDNYAESDIVIVGAGSCGLSTRYILGKKRPDLKIAIIE 107
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SVSPGGGAWLGGQLFSAM++RKPA FL E+GVPY+++ YVV+KHAALFTSTIMSK+L Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRKPADAFLREVGVPYEDEGNYVVVKHAALFTSTIMSKVL 167
Query: 539 ARPNVKLF 562 PN KLF Sbjct: 168 QLPNCKLF 175
>sp|Q9UUZ9|THI4_ASPOR Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2 Length = 327
Score = 168 bits (426), Expect = 1e-41 Identities = 85/130 (65%), Positives = 106/130 (81%), Gaps = 3/130 (2%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSK-NPNVKVAIVE 358 FKF PIRES V+R MTRRY D+ +A++D GAGS GLS AY L+K P++K+AIVE Sbjct: 48 FKFAPIRESQVSRAMTRRYFEDLDKYAESDVVIVGAGSCGLSTAYVLAKARPDLKIAIVE 107
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDE--KDTYVVIKHAALFTSTIMSK 532 SVSPGGGAWLGGQLFSAM++R+PA +FL+E+GVPY+E YVV+KHA+LFTST+MSK Sbjct: 108 ASVSPGGGAWLGGQLFSAMVMRRPAEVFLNELGVPYEEDANPNYVVVKHASLFTSTLMSK 167
Query: 533 LLARPNVKLF 562 +L+ PNVKLF Sbjct: 168 VLSFPNVKLF 177
>sp|P32318|THI4_YEAST Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1 Length = 326
Score = 166 bits (419), Expect = 1e-40 Identities = 80/128 (62%), Positives = 102/128 (79%), Gaps = 1/128 (0%) Frame = +2
Query: 182 FKFEPIRESIVAREMTRRYMTDMITHADTDXXXXGAGSAGLSCAYELSKN-PNVKVAIVE 358 FKF PIRES V+R MT RY D+ A +D GAGS+GLS AY ++KN P++KV I+E Sbjct: 38 FKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIE 97
Query: 359 QSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVPYDEKDTYVVIKHAALFTSTIMSKLL 538 SV+PGGG+WLGGQLFSAM++RKPAHLFL E+ +PY+++ YVV+KHAALF ST++SK+L Sbjct: 98 SSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVL 157
Query: 539 ARPNVKLF 562 PNVKLF Sbjct: 158 QLPNVKLF 165
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NRW5 |
Definition |
tr|A9NRW5|A9NRW5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
127 |
Score (bit) |
233.0 |
E-value |
7.0e-60 |
Report |
|