DK955893 [AcEST]

DK955893
Clone id	TST39A01NGRL0024_F01
Library	TST39
Length	554
Definition	Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_F01. 5' end sequence.
Accession	DK955893
Tissue type	prothallia with plantlets
Developmental stage	gametophytes with sporophytes
Contig ID	-
Sequence	TCAATAGGTACCGAATTTCCACACATCAAATGTCATTAGCGATAGTTGATGCTTCATGAA TGCCGTGCATTACTCCTCAGAAAACGTATTGTCTGCTTTGGGTTATGAAGCTCTGCATGT GTTGTTGTGGGTCTTTCGTCCTGCAGGCTTCTAAGCTATTTTTCTCATTCAGCAGTCTTT AGCAGTCAGAGAGGAGGATTTTCTTTCCAATCCGCTTCGTTACTGGGCACAGATGGAGTT TCTAGCGCATATCATGCATTGTACAATCAAGATTTCATCCTGCTTTGATTGGTGATTTGC ATATCCAGAACTTATCCATCAGGCAACCAGAGTACCCTTCTAACATTGATAGACAGAATT AATGGCATTAACCACACAAATTGCAGAGCGCTTCAGGCTTCAGCACAGAAAATGGAGCCC CACGAGTAGGGCATTCACATTCAAGATGGAAGACCTCTACAACTTCAAAGTAGCGGTAAC CTTGGAGGAGGCCAAGGCATTGCGAGAGGTGAAGGAAAATGTCAAGAAACAGAACAAGGT TTGGTGGCTGTGGG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q54EW3
Definition	sp\|Q54EW3\|IPO5_DICDI Probable importin-5 homolog OS=Dictyostelium discoideum
Align length	29
Score (bit)	30.8
E-value	4.6
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955893\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_F01, 5' (554 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q54EW3\|IPO5_DICDI Probable importin-5 homolog OS=Dictyosteliu... 31 4.6 >sp\|Q54EW3\|IPO5_DICDI Probable importin-5 homolog OS=Dictyostelium discoideum GN=DDB_G0291650 PE=3 SV=1 Length = 1067 Score = 30.8 bits (68), Expect = 4.6 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -2 Query: 211 IGKKILLSDC*RLLNEKNSLEACRTKDPQ 125 +GKK+ L+DC +++ +SLE + DPQ Sbjct: 553 VGKKVFLNDCIQIIQYVSSLEKFKDDDPQ 581
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DK955893\|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_F01, 5' (554 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****