BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955897|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_F05, 5'
         (488 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=M...    33   0.69 
sp|Q3B6K8|FABH_PELLD 3-oxoacyl-[acyl-carrier-protein] synthase 3...    31   3.4  
sp|Q8CIQ7|DOCK3_MOUSE Dedicator of cytokinesis protein 3 OS=Mus ...    31   3.4  
sp|P45128|MFD_HAEIN Transcription-repair-coupling factor OS=Haem...    30   5.8  
sp|Q8IZD9|DOCK3_HUMAN Dedicator of cytokinesis protein 3 OS=Homo...    30   7.6  

>sp|Q6P4T0|ATG2A_MOUSE Autophagy-related protein 2 homolog A OS=Mus
            musculus GN=Atg2a PE=1 SV=2
          Length = 1914

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +2

Query: 131  TEGIQKCTTG-SISSDSDEENASEKCTASILNHIPAPELAGRVSRHHFSEWLLVAK 295
            + G + C +   + SDSDEE+A     AS +   PAPE + R S+  FS  + V K
Sbjct: 861  SSGFKMCKSAFKLDSDSDEEDAQFFSMASGVPQTPAPEPSRRQSQSTFSTLVTVLK 916


>sp|Q3B6K8|FABH_PELLD 3-oxoacyl-[acyl-carrier-protein] synthase 3
           OS=Pelodictyon luteolum (strain DSM 273) GN=fabH PE=3
           SV=1
          Length = 329

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 166 NAACCAFLDTLGVPAEI*KSGSLTNQNILGGGKRRPVITPT 44
           NAAC  FL  L   ++  K+G+  N  ++GG K   +I  T
Sbjct: 110 NAACSGFLYALNTASQFIKAGTHKNVMVIGGDKMSSIIDYT 150


>sp|Q8CIQ7|DOCK3_MOUSE Dedicator of cytokinesis protein 3 OS=Mus
            musculus GN=Dock3 PE=1 SV=1
          Length = 2027

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -1

Query: 143  GYPRC---ACRNLKKWIFNKSEHSWRWKKEASYYSNTIDQEMKLPNF 12
            G P C   AC+   + +++    SW  K EASYY N I+Q+   P F
Sbjct: 1307 GIPLCRELACQY--ESLYDYQSLSWIRKMEASYYDNIIEQQRLEPEF 1351


>sp|P45128|MFD_HAEIN Transcription-repair-coupling factor
           OS=Haemophilus influenzae GN=mfd PE=3 SV=1
          Length = 1146

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = -3

Query: 183 SSLSEEMLPVVHFWIPSVCLQKFEKVDL*QIRTFLEVEKGGQLLLQHNRSRNE 25
           SS+ ++ LPV    +P V +Q  +K  L Q+R F+E  KG  L       R E
Sbjct: 347 SSVRQKNLPVAA--LPEVTIQSQQKEPLGQLRQFIEHFKGNVLFSVETEGRRE 397


>sp|Q8IZD9|DOCK3_HUMAN Dedicator of cytokinesis protein 3 OS=Homo
            sapiens GN=DOCK3 PE=1 SV=1
          Length = 2030

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
 Frame = -1

Query: 143  GYPRC---ACRNLKKWIFNKSEHSWRWKKEASYYSNTIDQEMKLPNF 12
            G P C   AC+   + +++    SW  K EASYY N ++Q+   P F
Sbjct: 1310 GIPLCRELACQY--ESLYDYQSLSWIRKMEASYYDNIMEQQRLEPEF 1354

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955897|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_F05, 5'
         (488 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******