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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955906
Clone id TST39A01NGRL0024_F15
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_F15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGGCGAGGAGCCCTCATTTCGTCATTTAAGCCTGTGCATCCTTCTCGGGTCAGCTAGGG
TTTCGTCCCTCTCTCCATTTGCTCCAGCTATGGTTTGCAAGCATGTGCCTAGGGTTTCCT
TGTTTCCGCGGTGCTTTTCTTTGGGTTTTGGACAATGCATTTCCATTCCCGCATTTCGTG
CTGCGATTAGCGCTACCATTATTGAAGGATTGCGTCCACTTTCATCGCCATTTCTCTGAC
ACAGAGCTCTCCTTGTGCTACATGGATCTTCTTAGGCACAATAGGGCCCGTATGTGAAGA
TGGGGGTTTTATTGCGGCAAAGGTTTGGCCGCTCGTTCTTGGACTTCTGACCTTGAGCTT
CACTTCCTCTGCAGAGCTGCTTGGGGAGTACTTTCCCTCATGAGGGTAGTGTTGCTTTAA
CGTTCTTCTCTTGGACTGTGCTCTATCTGCCGAGATGCCCTCATTAGGGTTGTGGTGATC
TGTGGGCTCCATGTGAGCTTGCAGAAGAATGGAATTTGGAGGGTTCAGGCTGTTTTTCCT
TTGGTCTGCAAAATGGATGCTCGGACTTACAT
■■Homology search results ■■ -
sp_hit_id Q01870
Definition sp|Q01870|WETA_PENCH Regulatory protein wetA OS=Penicillium chrysogenum
Align length 82
Score (bit) 35.8
E-value 0.16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955906|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_F15, 5'
         (572 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01870|WETA_PENCH Regulatory protein wetA OS=Penicillium chry...    36   0.16 
sp|Q6MG60|DDAH2_RAT N(G),N(G)-dimethylarginine dimethylaminohydr...    33   1.0  
sp|Q99LD8|DDAH2_MOUSE N(G),N(G)-dimethylarginine dimethylaminohy...    33   1.0  
sp|O95865|DDAH2_HUMAN N(G),N(G)-dimethylarginine dimethylaminohy...    33   1.0  
sp|O13791|SLT1_SCHPO Protein slt1 OS=Schizosaccharomyces pombe G...    32   1.7  
sp|Q3SX44|DDAH2_BOVIN N(G),N(G)-dimethylarginine dimethylaminohy...    32   2.2  
sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Pichi...    30   2.4  
sp|Q10145|YAS9_SCHPO Uncharacterized RNA-binding protein C3H8.09...    30   6.5  
sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1...    30   6.5  
sp|P78968|PPZ_SCHPO Serine/threonine-protein phosphatase PP-Z OS...    30   8.5  
sp|O01835|CPB3_CAEEL Cytoplasmic polyadenylation element-binding...    30   8.5  

>sp|Q01870|WETA_PENCH Regulatory protein wetA OS=Penicillium
           chrysogenum GN=WETA PE=4 SV=1
          Length = 499

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
 Frame = -3

Query: 561 SIHFADQRKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKYSP 382
           S+H ++ R     PP+ +L+Q    PT+      G SA+RA      L Q  P     SP
Sbjct: 186 SLHGSEDRLPLSPPPSDVLIQHENMPTEQIMNQHGDSAERASQYDARLYQQSPSVSMPSP 245

Query: 381 S--SSAEEVKLKVRSPRTSGQT 322
           S   SA + +  +  P +S  T
Sbjct: 246 SIAMSARQQQHYIAQPSSSSLT 267


>sp|Q6MG60|DDAH2_RAT N(G),N(G)-dimethylarginine
           dimethylaminohydrolase 2 OS=Rattus norvegicus GN=Ddah2
           PE=1 SV=1
          Length = 285

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 300 MGVLLRQRFGRSFLDF*P*ASLPLQSCLGSTFPHEGSVALTFFSWT 437
           +G  LRQR G   L+  P  SLPL   LG T   +G  AL    W+
Sbjct: 48  LGGKLRQRLGLQLLELPPEESLPLGPLLGDTAVIQGDTALITRPWS 93


>sp|Q99LD8|DDAH2_MOUSE N(G),N(G)-dimethylarginine
           dimethylaminohydrolase 2 OS=Mus musculus GN=Ddah2 PE=1
           SV=1
          Length = 285

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 300 MGVLLRQRFGRSFLDF*P*ASLPLQSCLGSTFPHEGSVALTFFSWT 437
           +G  LRQR G   L+  P  SLPL   LG T   +G  AL    W+
Sbjct: 48  LGGKLRQRLGLQLLELPPEESLPLGPLLGDTAVIQGDTALITRPWS 93


>sp|O95865|DDAH2_HUMAN N(G),N(G)-dimethylarginine
           dimethylaminohydrolase 2 OS=Homo sapiens GN=DDAH2 PE=1
           SV=1
          Length = 285

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 300 MGVLLRQRFGRSFLDF*P*ASLPLQSCLGSTFPHEGSVALTFFSWT 437
           +G  LRQR G   L+  P  SLPL   LG T   +G  AL    W+
Sbjct: 48  LGGKLRQRLGLQLLELPPEESLPLGPLLGDTAVIQGDTALITRPWS 93


>sp|O13791|SLT1_SCHPO Protein slt1 OS=Schizosaccharomyces pombe
           GN=slt1 PE=1 SV=3
          Length = 433

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 25/76 (32%), Positives = 34/76 (44%)
 Frame = -3

Query: 567 SPSIHFADQRKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKY 388
           SPS  FA   K +LNP   + ++   EPT   NP E + +                 G+Y
Sbjct: 269 SPSTSFAQMSKGALNPDPEV-IEPEDEPTTFRNPLEALLS----------------TGQY 311

Query: 387 SPSSSAEEVKLKVRSP 340
           S  SS E+V+  VR P
Sbjct: 312 SVVSSDEDVE-SVRDP 326


>sp|Q3SX44|DDAH2_BOVIN N(G),N(G)-dimethylarginine
           dimethylaminohydrolase 2 OS=Bos taurus GN=DDAH2 PE=2
           SV=1
          Length = 285

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +3

Query: 300 MGVLLRQRFGRSFLDF*P*ASLPLQSCLGSTFPHEGSVALTFFSWT 437
           +G  LRQR G   ++  P  SLPL   LG T   +G  AL    W+
Sbjct: 48  LGGKLRQRLGLQLVELPPEESLPLGPLLGDTAVIQGDTALITRPWS 93


>sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Pichia
            stipitis GN=SEC16 PE=3 SV=2
          Length = 2212

 Score = 30.0 bits (66), Expect(2) = 2.4
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 10/103 (9%)
 Frame = -3

Query: 564  PSIHFADQRKNSLNPPNSILLQAHMEP------TDHHNPNEGISADRAQSKRRTLKQHYP 403
            P +    Q +  L PPN +  Q    P      T ++ P    +  RAQ        + P
Sbjct: 809  PGLQPFPQPQGHLVPPNLVAPQIQNSPLGQPQQTHNYAPPINTNVARAQGNLSATSPYVP 868

Query: 402  HEGKYSPS----SSAEEVKLKVRSPRTSGQTFAAIKPPSSHTG 286
            + G Y+P+    S +    L           +A   PP SH+G
Sbjct: 869  NAGPYAPNNHNRSHSRASSLVGGGKGKEINPYAPALPPVSHSG 911



 Score = 20.4 bits (41), Expect(2) = 2.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 220 SGRNPSIMVALIAARNAGM 164
           SG +PSI  + + +RN G+
Sbjct: 910 SGTSPSIAQSSLTSRNRGI 928


>sp|Q10145|YAS9_SCHPO Uncharacterized RNA-binding protein C3H8.09c
           OS=Schizosaccharomyces pombe GN=SPAC3H8.09c PE=2 SV=1
          Length = 738

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = -3

Query: 567 SPSIHFADQRKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKY 388
           SP  H       S N PN      H E  +HHNP    S + A S       H     +Y
Sbjct: 263 SPEAHRTSIYSYSANLPN--YYNEHNELHEHHNPQTPSSPESAYSPENLQLNHEAQNVEY 320

Query: 387 SPSSSAEE 364
             +++AE+
Sbjct: 321 LGNNAAEK 328


>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
          Length = 5635

 Score = 30.4 bits (67), Expect = 6.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 367  GSEAQGQKSKNERPNLCRNKTPIFTYGPYCA*EDPCS 257
            G +     SK +R N C +   + + GP+CA ED C+
Sbjct: 5076 GFKIHASISKGDRSNQCPSGFTLDSVGPFCADEDECA 5112


>sp|P78968|PPZ_SCHPO Serine/threonine-protein phosphatase PP-Z
           OS=Schizosaccharomyces pombe GN=pzh1 PE=1 SV=1
          Length = 515

 Score = 30.0 bits (66), Expect = 8.5
 Identities = 27/99 (27%), Positives = 39/99 (39%)
 Frame = -3

Query: 567 SPSIHFADQRKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKY 388
           SP++    Q+++S N   S        PT  H  N+        S      QH+ H   +
Sbjct: 80  SPAVLQKHQQEDSGNSSQS--------PTSPHPSNQPAML----SPSTAASQHHHH---H 124

Query: 387 SPSSSAEEVKLKVRSPRTSGQTFAAIKPPSSHTGPIVPK 271
           S SSS         SP +SG   +     S H GP+ P+
Sbjct: 125 SSSSSYAVSPTSPTSPTSSGPIGSNFDSASEHNGPVYPQ 163
tr_hit_id Q7PNE5
Definition tr|Q7PNE5|Q7PNE5_ANOGA AGAP008263-PA OS=Anopheles gambiae
Align length 78
Score (bit) 37.4
E-value 0.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955906|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_F15, 5'
         (572 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7PNE5|Q7PNE5_ANOGA AGAP008263-PA OS=Anopheles gambiae GN=AGA...    37   0.60 
tr|A7NGH4|A7NGH4_ROSCS Putative uncharacterized protein OS=Rosei...    36   1.3  
tr|Q55ZV7|Q55ZV7_CRYNE Putative uncharacterized protein OS=Crypt...    36   1.3  
tr|Q7S0N9|Q7S0N9_NEUCR Predicted protein OS=Neurospora crassa GN...    36   1.7  
tr|Q4DDT2|Q4DDT2_TRYCR Putative uncharacterized protein OS=Trypa...    35   2.3  
tr|Q0UGA2|Q0UGA2_PHANO Putative uncharacterized protein OS=Phaeo...    35   3.0  
tr|B6M0S5|B6M0S5_BRAFL Putative uncharacterized protein OS=Branc...    34   5.0  
tr|A4I0I4|A4I0I4_LEIIN Putative uncharacterized protein OS=Leish...    34   5.0  
tr|Q4RZR3|Q4RZR3_TETNG Chromosome 18 SCAF14786, whole genome sho...    34   6.6  
tr|B3P365|B3P365_DROER GG23160 OS=Drosophila erecta GN=GG23160 P...    34   6.6  
tr|B6HRB1|B6HRB1_PENCH Regulator protein wetA-Penicillium chryso...    34   6.6  

>tr|Q7PNE5|Q7PNE5_ANOGA AGAP008263-PA OS=Anopheles gambiae
           GN=AGAP008263 PE=4 SV=4
          Length = 863

 Score = 37.4 bits (85), Expect = 0.60
 Identities = 26/78 (33%), Positives = 33/78 (42%)
 Frame = -3

Query: 501 QAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKYSPSSSAEEVKLKVRSPRTSGQT 322
           + H EP  HHN + G   DR   KR+  K+H+  + + SPS     V  K       G  
Sbjct: 713 ELHEEPLHHHNDHHGGGGDRLDRKRKKKKKHHRKQSR-SPSYEEMLVMEKNGGGGGGGVG 771

Query: 321 FAAIKPPSSHTGPIVPKK 268
            AA    S    P V KK
Sbjct: 772 AAAAASRSRTPSPEVEKK 789


>tr|A7NGH4|A7NGH4_ROSCS Putative uncharacterized protein
           OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8)
           GN=Rcas_0430 PE=4 SV=1
          Length = 215

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = +2

Query: 209 IASTFIAISLTQSSPCATWIF-----LGTIGPVCEDGGFIAAKVWPLVL 340
           +A+TF  ++L Q++P   W+F     LGT+G +      +A  +WPLVL
Sbjct: 149 LAATFAILALLQTTPGMRWMFVPAAVLGTMGLLLMTSAHLAGFLWPLVL 197


>tr|Q55ZV7|Q55ZV7_CRYNE Putative uncharacterized protein
           OS=Cryptococcus neoformans GN=CNBA3830 PE=4 SV=1
          Length = 499

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
 Frame = -3

Query: 486 PTDHHNP---NEGISADRAQSKRRTLKQHYPHEGKYSPSSSAEEVKLKVRSPRTSGQTFA 316
           P+ H +P   N+G S+  ++ K+++L     H G+   S     +K ++  P+   Q+  
Sbjct: 18  PSRHQSPLAENQGSSSSISKGKKKSLLDGVAHNGESPSSPGPISIKRRLVRPKKIRQSHG 77

Query: 315 AIKPPSSHTGPIVPKKIHVAQGE 247
            + PP+S    I  + + VA+ E
Sbjct: 78  DVSPPASVDPQIRQETLAVAEPE 100


>tr|Q7S0N9|Q7S0N9_NEUCR Predicted protein OS=Neurospora crassa
           GN=NCU10001 PE=4 SV=2
          Length = 726

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
 Frame = -3

Query: 540 RKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRT-LKQHYPHEGKYSPSSSAEE 364
           R  SL+ P S       + T   + +E     RA+   +T  ++HYP    + PS     
Sbjct: 102 RTRSLSVPRSFSPPPSDDETSAQDSDEERRRLRARHTPKTKTREHYPSGSHHRPSLQYYN 161

Query: 363 VKLKVRSPRTSGQTFAAIKPPSSHTGPIVPKKI 265
            +  +   R +G   A+ +PPS    P+ PK++
Sbjct: 162 DRASLSGSRLAGWPNASSRPPSRSPDPVRPKRM 194


>tr|Q4DDT2|Q4DDT2_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053509901.130 PE=4 SV=1
          Length = 318

 Score = 35.4 bits (80), Expect = 2.3
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
 Frame = -3

Query: 510 ILLQAHMEPTDHHNPNE------GISADRAQSKRRTLKQHYPHEGKYSPSSSAEEVKLKV 349
           +L + H +P  HH+P        G+S         T+K HYP + K  P  + ++     
Sbjct: 178 LLKRCHEDPEHHHHPKMPDGIRIGVSRRGCSGYSYTVKYHYPEDEKMPPKETDKQDTR-- 235

Query: 348 RSPRTSGQTFAAIKPPSSHTGPIV 277
           RS   +G T +A      HTG +V
Sbjct: 236 RSHGNNGDTSSA---TGMHTGDVV 256


>tr|Q0UGA2|Q0UGA2_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_09212 PE=4 SV=2
          Length = 641

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = -2

Query: 286 PYCA*EDPC--STRRALCQRNGDESGRNPSIMVALIAARNAGMEMHCPKPKEKHR 128
           P+   EDP   + R    Q+ GDE+   PS+ +A     ++G E H PKP+ +HR
Sbjct: 322 PFQIFEDPSKDAIRATAGQQRGDEASFAPSVSMA-----SSGKENHSPKPRRQHR 371


>tr|B6M0S5|B6M0S5_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_76822 PE=4 SV=1
          Length = 362

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
 Frame = -3

Query: 570 VSPSIHFADQRKNSLNPPNSILLQ-------AHMEP---TDH--HNPNEGISADRAQSKR 427
           VSPS     + + S N P S+ ++       A   P   +DH  H P   +S        
Sbjct: 168 VSPSRPLYPRTQYSANIPRSVSVEPSPMNDVADYPPPPLSDHEIHTPGSTVSGHSYLHTP 227

Query: 426 RTLKQHYPHEGKYSPSSSAEEVKLKVRSPRTSGQTFAAIKPPSSHTGPIVPKKIHVAQ 253
            T   H P E  Y+PSS A  +  +   P  S        PP  ++ P  P+  H+++
Sbjct: 228 HT--PHTPSERSYTPSSEARSLGARPAHPLKSFSVPGPPPPPPYNSLPTTPQSSHLSE 283


>tr|A4I0I4|A4I0I4_LEIIN Putative uncharacterized protein
           OS=Leishmania infantum GN=LinJ23.1480 PE=4 SV=1
          Length = 378

 Score = 34.3 bits (77), Expect = 5.0
 Identities = 29/96 (30%), Positives = 37/96 (38%)
 Frame = -3

Query: 564 PSIHFADQRKNSLNPPNSILLQAHMEPTDHHNPNEGISADRAQSKRRTLKQHYPHEGKYS 385
           PS   AD+   S+ P  S        P   H P   +S   A S   TL +H        
Sbjct: 197 PSWSIADRHAASITPSGSRSGSGRRTPRRSHEPFTYVSRACA-SDFTTLSEHGSEVPSVE 255

Query: 384 PSSSAEEVKLKVRSPRTSGQTFAAIKPPSSHTGPIV 277
           P+S +        S RT G T AA+ P S    P+V
Sbjct: 256 PASPSSMQPTTSSSSRTHGCTGAAMTPASLPQTPVV 291


>tr|Q4RZR3|Q4RZR3_TETNG Chromosome 18 SCAF14786, whole genome shotgun
            sequence. (Fragment) OS=Tetraodon nigroviridis
            GN=GSTENG00026365001 PE=4 SV=1
          Length = 2724

 Score = 33.9 bits (76), Expect = 6.6
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = -3

Query: 426  RTLKQHYPHEGKYSPSSSAEEVKLKVRSPRTSGQTFAAIKPPSSHTGPIVPKKIHVAQGE 247
            R LKQH   EG        +  +L V SP+T   T +A+  P+S   PI P   ++AQ E
Sbjct: 1013 RRLKQHTIEEG--------QRQQLSVSSPQTPTPTASALNTPASTLAPIRPH--NIAQTE 1062

Query: 246  LCVREMAMKVD 214
            L + E  +KV+
Sbjct: 1063 LAL-EKNVKVE 1072


>tr|B3P365|B3P365_DROER GG23160 OS=Drosophila erecta GN=GG23160 PE=4
           SV=1
          Length = 539

 Score = 33.9 bits (76), Expect = 6.6
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = -1

Query: 440 HSPREER*SNTTLMRESTPQAALQRK*SSRSEVQERAAKPLPQ*NP 303
           HSP EE      ++R+STPQ  LQ++   +++ Q++ A+  P   P
Sbjct: 405 HSPHEEATGEDLVLRQSTPQHHLQQQQQQQAQQQQQQAQHQPSPGP 450