DK955910 |
Clone id |
TST39A01NGRL0024_F19 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_F19. 5' end sequence. |
Accession |
DK955910 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3084Contig1 |
Sequence |
ATGACACCTTGAGAGAGCTGCGGACTCTGTGGCTTGCTTCAATGGAGCCCCTCCCCTGTC TTTCTCCCACCTTTACCCCATTCCGGTGGTCCCCTGCAACAAAGCTTCAACACATGACCC CAAGTGTTGTATGCGTTCGTCCTCATCGAACATCTGTTGCCCTCTCTGCAACATTGGATC GGGATCTTCGTGATGTACTAGAGCTAGCAAGTGATGCTGAGCTTCATGACTTGGCCAACA TACTGTATGGTCAAAGCTTGTTAAGTCCTTTGCTGAAGTCCGTAACAAGAGGAGACGGGT CTCACAAAAAGTTTGATCAGGAAACAGAAGAGAGAGAAGCCTTGGTGGAGCGTTTGGAAT CAAGATTTTTGTATTTGGGTGCAGATGCAAAGGAGACGCTAAGAGGTTGGAGACCAACAT ACCGTGCCATATTACTGGGTGTTCGCGCAAAATTAAATGTCCATTGCTCAGCGAAGCTTT CCACTGAGGATTTAGAAGCTGAAATTTTCTTACATCTTCTTCAACAAAATACTAGGGAAC GGACCAACATTTCTTTGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P75617 |
Definition |
sp|P75617|YAAW_ECOLI UPF0174 protein yaaW OS=Escherichia coli (strain K12) |
Align length |
122 |
Score (bit) |
40.4 |
E-value |
0.006 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP6 |
Definition |
tr|A9NKP6|A9NKP6_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
123 |
Score (bit) |
149.0 |
E-value |
8.0e-35 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955910|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_F19, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP6|A9NKP6_PICSI Putative uncharacterized protein OS=Picea... 149 8e-35 tr|A7QSV7|A7QSV7_VITVI Chromosome undetermined scaffold_163, who... 148 2e-34 tr|Q8LAD8|Q8LAD8_ARATH Putative uncharacterized protein (At1g734... 136 9e-31 tr|Q84WR4|Q84WR4_ARATH Putative uncharacterized protein At1g7347... 136 9e-31 tr|Q9FX40|Q9FX40_ARATH Putative uncharacterized protein T9L24.34... 121 2e-26 tr|B8BCI3|B8BCI3_ORYSI Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|A3BZE5|A3BZE5_ORYSJ Putative uncharacterized protein OS=Oryza... 114 3e-24 tr|B2GVN0|B2GVN0_ARATH At1g73470 OS=Arabidopsis thaliana PE=2 SV=1 95 2e-18 tr|Q3M732|Q3M732_ANAVT Putative uncharacterized protein OS=Anaba... 71 4e-11 tr|Q10W25|Q10W25_TRIEI Putative uncharacterized protein OS=Trich... 70 6e-11 tr|A0ZGS3|A0ZGS3_NODSP Putative uncharacterized protein (Fragmen... 70 8e-11 tr|B2J246|B2J246_NOSP7 Putative uncharacterized protein OS=Nosto... 67 5e-10 tr|B5W5V3|B5W5V3_SPIMA Putative uncharacterized protein OS=Arthr... 67 5e-10 tr|B4VIS4|B4VIS4_9CYAN Putative uncharacterized protein OS=Micro... 66 1e-09 tr|B8HN34|B8HN34_9CHRO Putative uncharacterized protein OS=Cyano... 65 3e-09 tr|A0YK70|A0YK70_9CYAN Putative uncharacterized protein OS=Lyngb... 65 3e-09 tr|B0C4B0|B0C4B0_ACAM1 Putative uncharacterized protein OS=Acary... 62 3e-08 tr|B1XLT1|B1XLT1_SYNP2 Putative uncharacterized protein OS=Synec... 61 4e-08 tr|B7K3K7|B7K3K7_SYNP8 Putative uncharacterized protein OS=Synec... 60 1e-07 tr|B4C1I2|B4C1I2_9CHRO Putative uncharacterized protein OS=Cyano... 60 1e-07 tr|A8YHW9|A8YHW9_MICAE Genome sequencing data, contig C315 OS=Mi... 57 5e-07 tr|Q8DIH4|Q8DIH4_THEEB Tll1614 protein OS=Thermosynechococcus el... 56 1e-06 tr|B4B449|B4B449_9CHRO Putative uncharacterized protein OS=Cyano... 55 2e-06 tr|B4WJF9|B4WJF9_9SYNE Putative uncharacterized protein OS=Synec... 55 3e-06 tr|P72875|P72875_SYNY3 Slr0975 protein OS=Synechocystis sp. (str... 53 1e-05 tr|B7KG27|B7KG27_9CHRO Putative uncharacterized protein OS=Cyano... 53 1e-05 tr|B1WSS2|B1WSS2_CYAA5 Putative uncharacterized protein OS=Cyano... 51 5e-05 tr|A3IPC6|A3IPC6_9CHRO Putative uncharacterized protein OS=Cyano... 51 5e-05 tr|Q4BWV6|Q4BWV6_CROWT Similar to Uncharacterized protein conser... 49 1e-04 tr|Q8XGV3|Q8XGV3_SALTI Putative uncharacterized protein (Putativ... 47 0.001
>tr|A9NKP6|A9NKP6_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 383
Score = 149 bits (377), Expect = 8e-35 Identities = 82/123 (66%), Positives = 97/123 (78%), Gaps = 2/123 (1%) Frame = +3
Query: 162 LSATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQ--ETEER 335 +++ DR+LR VLELASDAEL +L +ILYG+S+LSPLLKSVT DG Q + E R Sbjct: 73 ITSVKDRELRMVLELASDAELCELCDILYGRSILSPLLKSVTYRDGPQDILVQLDDQEAR 132
Query: 336 EALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLH 515 EAL+ERLESRFL+L ADA+ TL G RP+Y +LL VR KLNV CSAKLSTED+EAEIFLH Sbjct: 133 EALIERLESRFLFLAADARATLSGRRPSYHKVLLQVRKKLNVPCSAKLSTEDMEAEIFLH 192
Query: 516 LLQ 524 LLQ Sbjct: 193 LLQ 195
>tr|A7QSV7|A7QSV7_VITVI Chromosome undetermined scaffold_163, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00006040001 PE=4 SV=1 Length = 312
Score = 148 bits (373), Expect = 2e-34 Identities = 76/129 (58%), Positives = 95/129 (73%), Gaps = 1/129 (0%) Frame = +3
Query: 162 LSATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSVTR-GDGSHKKFDQETEERE 338 L D +LR VLELA+D+EL +L IL+G S SPLLKS++R D + +++ EERE Sbjct: 8 LICAFDPELRPVLELATDSELFELERILFGPSYFSPLLKSISRRADVDYAMIEEDLEERE 67
Query: 339 ALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHL 518 + LESRFL+L ADA+ TLRGWRP+YR +LLGVR KLNV CS+KLSTEDLE EIFLHL Sbjct: 68 DFISSLESRFLFLAADARSTLRGWRPSYRNVLLGVRKKLNVPCSSKLSTEDLEVEIFLHL 127
Query: 519 LQQNTRERT 545 LQ + E + Sbjct: 128 LQDYSSEES 136
>tr|Q8LAD8|Q8LAD8_ARATH Putative uncharacterized protein (At1g73470) OS=Arabidopsis thaliana PE=2 SV=1 Length = 351
Score = 136 bits (342), Expect = 9e-31 Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 1/129 (0%) Frame = +3
Query: 168 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 344 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 56 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 115
Query: 345 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 524 +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 116 IEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 175
Query: 525 QNTRERTNI 551 + E + + Sbjct: 176 NFSSEASGV 184
>tr|Q84WR4|Q84WR4_ARATH Putative uncharacterized protein At1g73470 (Fragment) OS=Arabidopsis thaliana GN=At1g73470 PE=2 SV=1 Length = 350
Score = 136 bits (342), Expect = 9e-31 Identities = 69/129 (53%), Positives = 92/129 (71%), Gaps = 1/129 (0%) Frame = +3
Query: 168 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 344 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 55 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 114
Query: 345 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 524 +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 115 IEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 174
Query: 525 QNTRERTNI 551 + E + + Sbjct: 175 NFSSEASGV 183
>tr|Q9FX40|Q9FX40_ARATH Putative uncharacterized protein T9L24.34 OS=Arabidopsis thaliana GN=T9L24.34 PE=4 SV=1 Length = 351
Score = 121 bits (304), Expect = 2e-26 Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 1/124 (0%) Frame = +3
Query: 168 ATLDRDLRDVLELASDAELHDLANILYGQSLLSPLLKSV-TRGDGSHKKFDQETEEREAL 344 AT D +LR V ELA+D+EL++L IL+G S SPLLKS+ +G G Q+ E R+ Sbjct: 56 ATYDPELRLVFELATDSELYELEKILFGPSYFSPLLKSIPNKGGGDRLMIGQDIEVRDGF 115
Query: 345 VERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQ 524 +E LESRFL+L ADA+ TLR P+YR +LL VR LN+ CS++L TEDLEAEIFL+L+ Sbjct: 116 IEALESRFLFLAADARSTLR---PSYRNVLLAVRNNLNIPCSSQLPTEDLEAEIFLYLVD 172
Query: 525 QNTR 536 +R Sbjct: 173 NFSR 176
>tr|B8BCI3|B8BCI3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_31585 PE=4 SV=1 Length = 384
Score = 114 bits (286), Expect = 3e-24 Identities = 86/204 (42%), Positives = 108/204 (52%), Gaps = 40/204 (19%) Frame = +3
Query: 36 ASMEPLPCLSPTFTPF--------RWSPA----TKLQHMTPSVVCVRP---HRTSVALSA 170 AS PLP LSP P R +PA T + V +RP R S + SA Sbjct: 16 ASRSPLP-LSPATRPAPASSRFGDRRAPAVVAATARRRGAHGVRALRPLLLPRASASPSA 74
Query: 171 TL------DRDLRDVLELASDAELHDLANILYG------------------QSLLSPLLK 278 D +LR VLELA+D EL + ILYG +S SPLLK Sbjct: 75 KTAAGGMSDPELRMVLELATDEELMEFEEILYGTSYEPQMAKPKPANLSKIKSYFSPLLK 134
Query: 279 SVT-RGDGSHKKFDQETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKL 455 S+ R + + + EER+ + +LESRFLYL ADA+ +RG RP+YR +LLGVR +L Sbjct: 135 SIAKRPNSDYVDALDDIEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRREL 194
Query: 456 NVHCSAKLSTEDLEAEIFLHLLQQ 527 V CS+KL T DLEAEIFLHLL + Sbjct: 195 GVRCSSKLCTADLEAEIFLHLLDE 218
>tr|A3BZE5|A3BZE5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_028417 PE=4 SV=1 Length = 387
Score = 114 bits (286), Expect = 3e-24 Identities = 86/204 (42%), Positives = 108/204 (52%), Gaps = 40/204 (19%) Frame = +3
Query: 36 ASMEPLPCLSPTFTPF--------RWSPA----TKLQHMTPSVVCVRP---HRTSVALSA 170 AS PLP LSP P R +PA T + V +RP R S + SA Sbjct: 20 ASRSPLP-LSPAARPAPASSRFGDRRAPAVVAATARRRGAHGVRALRPLLLPRASASPSA 78
Query: 171 TL------DRDLRDVLELASDAELHDLANILYG------------------QSLLSPLLK 278 D +LR VLELA+D EL + ILYG +S SPLLK Sbjct: 79 KTAAGGMSDPELRMVLELATDEELMEFEEILYGTSYEPQMAKPKPANLSKIKSYFSPLLK 138
Query: 279 SVT-RGDGSHKKFDQETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKL 455 S+ R + + + EER+ + +LESRFLYL ADA+ +RG RP+YR +LLGVR +L Sbjct: 139 SIAKRPNSDYVDALDDIEERDIFISKLESRFLYLAADARSIIRGSRPSYRNVLLGVRREL 198
Query: 456 NVHCSAKLSTEDLEAEIFLHLLQQ 527 V CS+KL T DLEAEIFLHLL + Sbjct: 199 GVRCSSKLCTADLEAEIFLHLLDE 222
>tr|B2GVN0|B2GVN0_ARATH At1g73470 OS=Arabidopsis thaliana PE=2 SV=1 Length = 248
Score = 95.1 bits (235), Expect = 2e-18 Identities = 44/78 (56%), Positives = 59/78 (75%) Frame = +3
Query: 318 QETEEREALVERLESRFLYLGADAKETLRGWRPTYRAILLGVRAKLNVHCSAKLSTEDLE 497 Q+ E R+ +E LESRFL+L ADA+ TLRGWRP+YR +LL VR LN+ CS++L TEDLE Sbjct: 4 QDIEVRDGFIEALESRFLFLAADARSTLRGWRPSYRNVLLAVRNNLNIPCSSQLPTEDLE 63
Query: 498 AEIFLHLLQQNTRERTNI 551 AEIFL+L+ + E + + Sbjct: 64 AEIFLYLVDNFSSEASGV 81
>tr|Q3M732|Q3M732_ANAVT Putative uncharacterized protein OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=Ava_3598 PE=4 SV=1 Length = 280
Score = 70.9 bits (172), Expect = 4e-11 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%) Frame = +3
Query: 183 DLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQETEEREALVERLES 362 +LR LELA+D EL DL IL+ + +PL T + + +++ REA ++ LE+ Sbjct: 3 ELRAALELATDEELQDLTAILFSRKF-NPLDYVQTP-----EPIEIQSQNREAWLDSLEN 56
Query: 363 RFLYLGADAKETLRGW--RPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLLQQ 527 RF +L AD LRG + TYR L+ V L + S L+T DLEAE+FLHLL Q Sbjct: 57 RFRFLAADGVTVLRGRTSQVTYRQALIQVCKYLKIPYSQDLTTIDLEAEVFLHLLGQ 113
>tr|Q10W25|Q10W25_TRIEI Putative uncharacterized protein OS=Trichodesmium erythraeum (strain IMS101) GN=Tery_4573 PE=4 SV=1 Length = 286
Score = 70.5 bits (171), Expect = 6e-11 Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%) Frame = +3
Query: 183 DLRDVLELASDAELHDLANILYGQSLLSPLLKSVTRGDGSHKKFDQETEEREALVERLES 362 +LR VLELA++ EL L +L+G+ + +PL T D ++ +R ++ L+ Sbjct: 16 ELRAVLELATEEELQQLTELLFGRGI-NPLDYFQTP-----LPIDVQSRDRHVWLDALDQ 69
Query: 363 RFLYLGADAKETLRG--WRPTYRAILLGVRAKLNVHCSAKLSTEDLEAEIFLHLL 521 RF YL AD LRG + TYR +L+ V L + S KLST DLEAE+FL++L Sbjct: 70 RFRYLAADGMTVLRGKTQKVTYRQVLIKVCDYLKIPYSQKLSTTDLEAEVFLNVL 124
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