DK955912 |
Clone id |
TST39A01NGRL0024_F21 |
Library |
TST39 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_F21. 5' end sequence. |
Accession |
DK955912 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2Contig4 |
Sequence |
GCAATGGCGAGCTCTGTGGCTTCTTTGGCAGTTGCTGCTCCCTCGTGCGCCCCGGCAGAG AGCCTATCTAAGAGCTTCTCCGGCCTCAGGCCCACTACCCTCGCTGCCCCCAAGAGCGCC AACCCGCTCTCCATCTCCAACGGCAGCCGCGTGAGCGCCATGCTTGTGTGGAAGCCGTAT GACAACAAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGACAAGCGAGCAGATTGCG AAGCAGGTGGACTTCATGGTCCGGAAGGGCTGGACCCCCTGCATTGAGTTCGACAAAATC GGAAGCGTATACCGAGAGCACTTCCATGGCAGCGGCTACTACGATGGGCGATACTGGGTG ATGTGGAAGTTGCCCATGTTTGGCTGCCAAGATGCCGCCGCTGTGCTGCGTGAAATTGCA GAGTGCGCCAAGGAGTACCCCGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCCAAGAGG CAGGTGCAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAGAAATCAATGATTTAT CCTCGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q40250 |
Definition |
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa |
Align length |
157 |
Score (bit) |
182.0 |
E-value |
7.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955912|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_F21, 5' (546 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 182 7e-46 sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 182 1e-45 sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 182 1e-45 sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 181 2e-45 sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 181 3e-45 sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 179 6e-45 sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 179 8e-45 sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 179 1e-44 sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 179 1e-44 sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 179 1e-44 sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 179 1e-44 sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 178 1e-44 sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 178 2e-44 sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 177 2e-44 sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 177 3e-44 sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha... 177 4e-44 sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 176 5e-44 sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 176 5e-44 sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 176 7e-44 sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 175 1e-43 sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 175 1e-43 sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 175 1e-43 sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 175 1e-43 sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha... 175 1e-43 sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 175 1e-43 sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 174 2e-43 sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 174 2e-43 sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha... 174 2e-43 sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha... 174 2e-43 sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 174 3e-43
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1 Length = 181
Score = 182 bits (463), Expect = 7e-46 Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%) Frame = +1
Query: 64 LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 228 L+ F+GL+ P T A + L SNG RV M VW P KK+ETLSYLPPL+ Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80
Query: 229 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 405 E ++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V Sbjct: 81 EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140
Query: 406 LREIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 516 ++E+ EC KEYP AFIRV+GFD RQVQ F+V KP Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177
>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1 Length = 177
Score = 182 bits (461), Expect = 1e-45 Identities = 88/152 (57%), Positives = 106/152 (69%), Gaps = 4/152 (2%) Frame = +1
Query: 76 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 243 F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 244 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 423 +VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 424 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 K YPE F+R++GFD KRQVQ F+ KP+ Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1 Length = 177
Score = 182 bits (461), Expect = 1e-45 Identities = 88/152 (57%), Positives = 106/152 (69%), Gaps = 4/152 (2%) Frame = +1
Query: 76 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 243 F+GLR + A K+ N LS SNG RVS M VW P KKFETLSYLPPL+ E +AK Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 244 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 423 +VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 424 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 K YPE F+R++GFD KRQVQ F+ KP+ Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2 SV=1 Length = 178
Score = 181 bits (459), Expect = 2e-45 Identities = 79/127 (62%), Positives = 96/127 (75%) Frame = +1
Query: 136 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 315 SNG RV M VW P KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR Sbjct: 49 SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108
Query: 316 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQVS 495 E+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD RQVQ Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168
Query: 496 GFLVQKP 516 FL KP Sbjct: 169 SFLTYKP 175
>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1 Length = 177
Score = 181 bits (458), Expect = 3e-45 Identities = 87/153 (56%), Positives = 106/153 (69%), Gaps = 5/153 (3%) Frame = +1
Query: 76 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 240 F+GLR P T A K+ + L SNG +VS M VW P KKFETLSYLPPL+ E +A Sbjct: 26 FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84
Query: 241 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 K+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ Sbjct: 85 KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 144
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 E K YPE F+R++GFD KRQVQ F+ KP+ Sbjct: 145 EAKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1 Length = 182
Score = 179 bits (455), Expect = 6e-45 Identities = 81/128 (63%), Positives = 98/128 (76%), Gaps = 1/128 (0%) Frame = +1
Query: 136 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFD-KIGSVY 312 SNG RV M VW P KKFETLSYLPPL+SEQ+AK+VD+++RK PC+EF+ + G VY Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111
Query: 313 REHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAKRQVQV 492 REH GYYDGRYW MWKLPMFGC D++ VL+E+ EC K YP AFIR++GFD KRQVQ+ Sbjct: 112 REHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQVQI 171
Query: 493 SGFLVQKP 516 F+ KP Sbjct: 172 ISFIAYKP 179
>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain 1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A PE=1 SV=2 Length = 180
Score = 179 bits (454), Expect = 8e-45 Identities = 84/152 (55%), Positives = 108/152 (71%), Gaps = 5/152 (3%) Frame = +1
Query: 76 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 243 F+GL+ + A K+ N ++ SNG RV+ M VW P KKFETLSYLP LT ++AK Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83
Query: 244 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 +VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+ Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 516 EC KEYP AFIR++GFD RQVQ F+ KP Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1 Length = 178
Score = 179 bits (453), Expect = 1e-44 Identities = 85/157 (54%), Positives = 111/157 (70%), Gaps = 4/157 (2%) Frame = +1
Query: 64 LSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 234 L+ F+GL+ + K N ++ SNGSRV+ M VW P KKFETLSYLPPLT EQ Sbjct: 21 LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80
Query: 235 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 411 + K+V++++RKGW PC+EF+ + G V+R++ GYYDGRYW MW+LP+FG DAA VL+ Sbjct: 81 LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140
Query: 412 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPSV 522 E+AEC EYPEAFIR++GFD RQVQ F+ P V Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177
>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Hordeum vulgare PE=2 SV=1 Length = 174
Score = 179 bits (453), Expect = 1e-44 Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 3/150 (2%) Frame = +1
Query: 76 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 246 F GL+ T ++ +A+ S+SNG R+ M VW KKFETLSYLPPL++E + KQ Sbjct: 16 FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75
Query: 247 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 426 VD+++R W PC+EF K+G ++REH GYYDGRYW MWKLPMFGC DA VL E+ E Sbjct: 76 VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135
Query: 427 AKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 516 KEYP+A++R++GFD RQVQ F+ KP Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165
>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1 Length = 178
Score = 179 bits (453), Expect = 1e-44 Identities = 88/155 (56%), Positives = 110/155 (70%), Gaps = 8/155 (5%) Frame = +1
Query: 76 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 234 F+GL+ PTT K AN S SNG RV M VW P KK+ETLSYLPPLT Q Sbjct: 25 FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80
Query: 235 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 411 +AK+VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D+A V++ Sbjct: 81 LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140
Query: 412 EIAECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKP 516 E+AEC KEYP+A+IR++GFD RQVQ F+ +P Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q43110 |
Definition |
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata |
Align length |
152 |
Score (bit) |
285.0 |
E-value |
1.0e-75 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955912|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_F21, 5' (546 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 285 1e-75 tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 203 5e-51 tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 202 1e-50 tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 199 8e-50 tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 2e-49 tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 195 1e-48 tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 195 1e-48 tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 186 9e-46 tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 185 1e-45 tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 185 1e-45 tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 185 2e-45 tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 184 3e-45 tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 182 8e-45 tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 182 8e-45 tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 182 1e-44 tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 182 1e-44 tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44 tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 181 2e-44 tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 181 3e-44 tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44 tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 180 4e-44 tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 180 4e-44 tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 180 5e-44 tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 179 6e-44 tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 179 8e-44 tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c... 179 1e-43 tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c... 178 1e-43 tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t... 178 2e-43 tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c... 177 2e-43
>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1 Length = 174
Score = 285 bits (729), Expect = 1e-75 Identities = 132/152 (86%), Positives = 144/152 (94%) Frame = +1
Query: 64 LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 243 LSKSFSGL+ TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81
Query: 244 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 423 QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141
Query: 424 CAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 CAKEYP AFIRVLGFDAKRQVQV+GFLV+KPS Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173
>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87752 PE=3 SV=1 Length = 179
Score = 203 bits (516), Expect = 5e-51 Identities = 95/153 (62%), Positives = 115/153 (75%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K FSGL+ TTL+A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC + +P ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_87740 PE=3 SV=1 Length = 179
Score = 202 bits (513), Expect = 1e-50 Identities = 95/153 (62%), Positives = 114/153 (74%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K FSGL+ TTL A K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC + +P ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_221004 PE=3 SV=1 Length = 184
Score = 199 bits (506), Expect = 8e-50 Identities = 91/153 (59%), Positives = 115/153 (75%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+P TL + K+ ++ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC ++P ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184
>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small chain (Fragment) OS=Physcomitrella patens PE=2 SV=1 Length = 214
Score = 197 bits (502), Expect = 2e-49 Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ TL + K+ S+ NGSRV M VW P KFET SYLPPLT +QIAKQV Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC ++P ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214
>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PprbcS1 PE=2 SV=1 Length = 184
Score = 195 bits (495), Expect = 1e-48 Identities = 90/153 (58%), Positives = 112/153 (73%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ TL KS S+ NGSRV M VW P KFET SYLPPL+ +QIA+QV Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC YP ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184
>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_225236 PE=3 SV=1 Length = 183
Score = 195 bits (495), Expect = 1e-48 Identities = 89/153 (58%), Positives = 114/153 (74%), Gaps = 3/153 (1%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ TL + ++ S+ NGSRV M VW P KFET SYLPPLT ++IAKQV Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 420 D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150
Query: 421 ECAKEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 EC ++P ++RVLGFD+K+QVQ+ GFLV +P+ Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183
>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115069 PE=3 SV=1 Length = 181
Score = 186 bits (471), Expect = 9e-46 Identities = 85/150 (56%), Positives = 107/150 (71%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ T+ + K+ N S+ NGSRV M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 429 ++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 430 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 K +P F+RVLGFD +QVQ+ GFLV +P+ Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_146969 PE=3 SV=1 Length = 181
Score = 185 bits (470), Expect = 1e-45 Identities = 86/150 (57%), Positives = 107/150 (71%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ +TL + K+ + S+ NGSRV M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 429 D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151
Query: 430 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 K +P F+RVLGFD +QVQ+ GFLV +P+ Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small chain OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_123666 PE=3 SV=1 Length = 181
Score = 185 bits (470), Expect = 1e-45 Identities = 86/150 (57%), Positives = 108/150 (72%) Frame = +1
Query: 70 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 249 K+FSGL+ TL + +S S+ NGSRV+ M VW P KFET SYLPPL+ + IAKQV Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 250 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 429 ++M+++ PC+EFD V RE+ GYYDGRYW MWKLPMFGCQD+A VLREI EC Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 430 KEYPEAFIRVLGFDAKRQVQVSGFLVQKPS 519 K +P F+RVLGFD +QVQ+ GFLV +P+ Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
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