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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955921
Clone id TST39A01NGRL0024_G06
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_G06. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GTGCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTG
GCAGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTC
AGGCCCACTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGC
CGCGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCC
TACTTGCCGCCTTTGACAAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAG
GGCTGGACCCCCTGCATTGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCAT
GGCAGCGGCTACTACGATGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGC
CAAGATGCCGCCGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTACCCCGAAGCC
TTCATCCGCGTGCTGGGCTTTGACGCCNAGAGGCAGGTGCAGGTCTCCGTCTTCCTTGTC
CAGAAGCCCTCTGTCTAGAAATCAATGATTTATCCTCGGAGACAACGACAATGCGTTCGT
AGCCCTTTTTTCTCTCAA
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 157
Score (bit) 182.0
E-value 9.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G06, 5'
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   182   9e-46
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   181   4e-45
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   180   5e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   179   1e-44
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   179   1e-44
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   178   2e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   178   2e-44
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   177   3e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   177   3e-44
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   176   7e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   176   9e-44
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   176   1e-43
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   176   1e-43
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   176   1e-43
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   176   1e-43
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   175   2e-43
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   175   2e-43
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   174   3e-43
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   174   3e-43
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|A2Y205|RBS1_ORYSI Ribulose bisphosphate carboxylase small cha...   174   3e-43
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   174   4e-43
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   174   4e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   174   4e-43

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  182 bits (463), Expect = 9e-46
 Identities = 87/157 (55%), Positives = 109/157 (69%), Gaps = 6/157 (3%)
 Frame = +1

Query: 97  LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 261
           L+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPL+ 
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 262 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 438
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 439 LREIAECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKP 549
           ++E+ EC KEYP AFIRV+GFD  RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  181 bits (458), Expect = 4e-45
 Identities = 88/155 (56%), Positives = 111/155 (71%), Gaps = 8/155 (5%)
 Frame = +1

Query: 109 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 267
           F+GL+     PTT    K AN  S   SNG RV  M VW P   KK+ETLSYLPPLT  Q
Sbjct: 25  FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80

Query: 268 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 444
           +AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++
Sbjct: 81  LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140

Query: 445 EIAECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKP 549
           E+AEC KEYP+A+IR++GFD  RQVQ  +F+  +P
Sbjct: 141 ELAECKKEYPQAWIRIIGFDNVRQVQCIMFIASRP 175


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  180 bits (457), Expect = 5e-45
 Identities = 79/127 (62%), Positives = 96/127 (75%)
 Frame = +1

Query: 169 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 348
           SNG RV  M VW P   KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 349 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 528
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GFD  RQVQ  
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQVQCI 168

Query: 529 VFLVQKP 549
            FL  KP
Sbjct: 169 SFLTYKP 175


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  179 bits (453), Expect = 1e-44
 Identities = 87/152 (57%), Positives = 105/152 (69%), Gaps = 4/152 (2%)
 Frame = +1

Query: 109 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 276
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 457 CAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
             K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  179 bits (453), Expect = 1e-44
 Identities = 87/152 (57%), Positives = 105/152 (69%), Gaps = 4/152 (2%)
 Frame = +1

Query: 109 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 276
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 457 CAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
             K YPE F+R++GFD  RQVQ   F+  KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  178 bits (452), Expect = 2e-44
 Identities = 85/157 (54%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
 Frame = +1

Query: 97  LSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 267
           L+  F+GL+ +      K  N ++   SNGSRV+ M VW P   KKFETLSYLPPLT EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 268 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 444
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 445 EIAECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPSV 555
           E+AEC  EYPEAFIR++GFD  RQVQ   F+   P V
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  178 bits (452), Expect = 2e-44
 Identities = 84/152 (55%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
 Frame = +1

Query: 109 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 276
           F+GL+ +    A  K+ N ++   SNG RV+ M VW P   KKFETLSYLP LT  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 277 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKP 549
           EC KEYP AFIR++GFD  RQVQ   F+  KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175


>sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1
          Length = 189

 Score =  178 bits (451), Expect = 2e-44
 Identities = 79/127 (62%), Positives = 97/127 (76%)
 Frame = +1

Query: 169 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 348
           SNGSRV  M VW PY NKKFETLSYLP LT EQ+ K+V+++++  W PC+EF++ G + R
Sbjct: 60  SNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIKR 119

Query: 349 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 528
            + +  GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP AFIRV+GFD  RQVQ  
Sbjct: 120 VYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCI 179

Query: 529 VFLVQKP 549
            F+V KP
Sbjct: 180 SFIVHKP 186


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  178 bits (451), Expect = 2e-44
 Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
 Frame = +1

Query: 109 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 279
           F GL+ T    ++   +A+  S+SNG R+  M VW     KKFETLSYLPPL++E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 280 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 459
           VD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E 
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 460 AKEYPEAFIRVLGFDAXRQVQVSVFLVQKP 549
            KEYP+A++R++GFD  RQVQ   F+  KP
Sbjct: 136 KKEYPDAYVRIIGFDNMRQVQCVSFIAFKP 165


>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
          Length = 171

 Score =  177 bits (450), Expect = 3e-44
 Identities = 78/127 (61%), Positives = 96/127 (75%)
 Frame = +1

Query: 169 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 348
           SNG RV  M VW P+ N KFETLSYLP LT EQ+ K+V++++R  W PC+EFD  GS+ R
Sbjct: 44  SNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLEGSISR 103

Query: 349 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGFDAXRQVQVS 528
           ++    GYYDGRYWVMWKLPMFGC +A+ V+ E+ ECAK YP+AFIRV+GFD  RQVQ  
Sbjct: 104 KYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCI 163

Query: 529 VFLVQKP 549
            F+V KP
Sbjct: 164 SFIVHKP 170
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 152
Score (bit) 279.0
E-value 8.0e-74
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955921|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G06, 5'
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   279   8e-74
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   197   4e-49
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   196   9e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   193   6e-48
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   192   2e-47
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   189   1e-46
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   189   1e-46
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   184   3e-45
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   183   6e-45
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   182   1e-44
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   179   9e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   179   9e-44
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   179   1e-43
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   178   2e-43
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   178   3e-43
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   178   3e-43
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c...   177   3e-43
tr|A5PJI4|A5PJI4_BOVIN Putative uncharacterized protein OS=Bos t...   177   3e-43
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   177   4e-43
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   177   4e-43

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  279 bits (714), Expect = 8e-74
 Identities = 130/152 (85%), Positives = 142/152 (93%)
 Frame = +1

Query: 97  LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 276
           LSKSFSGL+  TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 277 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 456
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 457 CAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           CAKEYP AFIRVLGFDA RQVQV+ FLV+KPS
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  197 bits (501), Expect = 4e-49
 Identities = 93/153 (60%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K FSGL+ TTL+A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC + +P  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  196 bits (498), Expect = 9e-49
 Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K FSGL+ TTL A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC + +P  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  193 bits (491), Expect = 6e-48
 Identities = 89/153 (58%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K+FSGL+P TL + K+    ++ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC  ++P  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  192 bits (487), Expect = 2e-47
 Identities = 89/153 (58%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K+FSGL+  TL + K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC  ++P  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  189 bits (480), Expect = 1e-46
 Identities = 88/153 (57%), Positives = 110/153 (71%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPL+ +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC   YP  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  189 bits (480), Expect = 1e-46
 Identities = 87/153 (56%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K+FSGL+  TL + ++    S+ NGSRV  M VW P    KFET SYLPPLT ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 453
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 454 ECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           EC  ++P  ++RVLGFD+ +QVQ+  FLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  184 bits (468), Expect = 3e-45
 Identities = 87/157 (55%), Positives = 110/157 (70%), Gaps = 6/157 (3%)
 Frame = +1

Query: 97  LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 261
           L+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPL+ 
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 262 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 438
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 439 LREIAECAKEYPEAFIRVLGFDAXRQVQVSVFLVQKP 549
           ++E+ EC KEYP AFIRV+GFD+ RQVQ   F+V KP
Sbjct: 141 MKEVGECKKEYPNAFIRVIGFDSVRQVQCISFIVSKP 177


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
           chain OS=Picea sitchensis PE=2 SV=1
          Length = 159

 Score =  183 bits (465), Expect = 6e-45
 Identities = 83/138 (60%), Positives = 103/138 (74%)
 Frame = +1

Query: 136 AAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPC 315
           A PK++N    SNG RV  M VW PY+N KFETLSYLP LT EQ+ K+V++++R  W PC
Sbjct: 19  APPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPC 78

Query: 316 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 495
           +EFD+ G + R++    GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP+AFIRV+
Sbjct: 79  LEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVI 138

Query: 496 GFDAXRQVQVSVFLVQKP 549
           GFD  RQVQ   F+V KP
Sbjct: 139 GFDNVRQVQCISFIVHKP 156


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  182 bits (463), Expect = 1e-44
 Identities = 84/150 (56%), Positives = 106/150 (70%)
 Frame = +1

Query: 103 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 282
           K+FSGL+  T+ + K+ N  S+ NGSRV  M VW P    KFET SYLPPL+ + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 283 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 462
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A VLREI EC 
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151

Query: 463 KEYPEAFIRVLGFDAXRQVQVSVFLVQKPS 552
           K +P  F+RVLGFD  +QVQ+  FLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181