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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK955930
Clone id TST39A01NGRL0024_G15
Library
Length 619
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_G15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
GAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTCTCTAGACGAGGGCTTGTAG
CTTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGTTGGCTCCGTCCAGAATTTC
ACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGCTCCTGCTTCTGCCTTCTTT
GGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATTAGCAATATTGCCAAGCATTTCG
TTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAAGGACAGATGGGCTGGTCTTG
CATATGACACCTCCGATGACCAGCAAGACATCACTCGTGGAAAAGGCATGGTGGACGCTC
TTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGTCATGAGTTCGTATGACTATA
TTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAAGGATGGCTATTACATCGCCC
CTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAACTTCATGAACTTACCAAATA
TCAAGGTGCCTTTGATTCTTGGTATTTTGGGGTGGCAAGGGGCAAGGCAAGTCCTTCCAG
TGTGAGCTTGTCTTTTCAA
■■Homology search results ■■ -
sp_hit_id Q7X9A0
Definition sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata
Align length 117
Score (bit) 166.0
E-value 5.0e-49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955930|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G15, 5'
         (619 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase...   166   5e-49
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase...   166   5e-49
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ...   168   1e-48
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ...   172   7e-48
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ...   169   2e-47
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ...   160   2e-47
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   162   4e-47
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase...   166   1e-46
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ...   166   1e-46
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ...   160   2e-46
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ...   165   2e-46
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase...   159   4e-45
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase...   159   9e-45
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ...   153   1e-43
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ...   139   2e-39
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ...   120   4e-31
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ...    62   5e-12
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ...    61   8e-12
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ...    69   3e-11
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus...    35   0.31 
sp|Q571H0|NPA1P_MOUSE Nucleolar pre-ribosomal-associated protein...    34   0.69 
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ...    32   2.0  
sp|A6NM43|TCPQL_HUMAN Putative T-complex protein 1 subunit theta...    32   2.6  
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem...    32   3.4  
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom...    32   3.4  
sp|P17019|ZN708_HUMAN Zinc finger protein 708 OS=Homo sapiens GN...    31   4.5  
sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegi...    31   5.8  
sp|Q8CNW8|DHA_STAES Alanine dehydrogenase OS=Staphylococcus epid...    31   5.8  
sp|Q5HNJ6|DHA_STAEQ Alanine dehydrogenase OS=Staphylococcus epid...    31   5.8  
sp|Q80WB5|WDYHV_MOUSE WDYHV motif-containing protein 1 OS=Mus mu...    31   5.9  

>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
           PE=2 SV=1
          Length = 476

 Score =  166 bits (419), Expect(3) = 5e-49
 Identities = 81/117 (69%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 234 HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSS 410
           +F + A E  E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSS
Sbjct: 52  NFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSS 111

Query: 411 YDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           YDYISQG R +++DN  DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGI G +G
Sbjct: 112 YDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKG 168



 Score = 41.2 bits (95), Expect(3) = 5e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



 Score = 28.9 bits (63), Expect(3) = 5e-49
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 127 VNGTPVRVRSTAPASAFFGASLKKTA 204
           +NG+  R  S  P++AFFG+SLKK+A
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSA 42


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
           activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
           PE=2 SV=1
          Length = 435

 Score =  166 bits (419), Expect(3) = 5e-49
 Identities = 81/117 (69%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
 Frame = +3

Query: 234 HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSS 410
           +F + A E  E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSS
Sbjct: 52  NFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSS 111

Query: 411 YDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           YDYISQG R +++DN  DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGI G +G
Sbjct: 112 YDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKG 168



 Score = 41.2 bits (95), Expect(3) = 5e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



 Score = 28.9 bits (63), Expect(3) = 5e-49
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = +1

Query: 127 VNGTPVRVRSTAPASAFFGASLKKTA 204
           +NG+  R  S  P++AFFG+SLKK+A
Sbjct: 18  LNGSGARA-SLVPSTAFFGSSLKKSA 42


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Malus domestica GN=RCA PE=2
           SV=1
          Length = 437

 Score =  168 bits (426), Expect(3) = 1e-48
 Identities = 82/111 (73%), Positives = 90/111 (81%)
 Frame = +3

Query: 249 ASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 428
           AS DE KQT KDRW GLA+DTSDDQQDITRGKG VD+LFQ   G GT  A+MSSY+YIS 
Sbjct: 58  ASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYIST 117

Query: 429 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           G R ++ DN  DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGI G +G
Sbjct: 118 GLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKG 168



 Score = 41.2 bits (95), Expect(3) = 1e-48
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



 Score = 24.6 bits (52), Expect(3) = 1e-48
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 100 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKK 198
           +GSV N  P N       ++ P+S F G+SLKK
Sbjct: 8   IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKK 39


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
           PE=1 SV=2
          Length = 474

 Score =  172 bits (436), Expect(2) = 7e-48
 Identities = 80/107 (74%), Positives = 92/107 (85%)
 Frame = +3

Query: 261 EGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRM 440
           E KQT  DRW GLAYDTSDDQQDITRGKGMVD++FQ  +G GT HAV+SSY+Y+SQG R 
Sbjct: 62  EDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQ 121

Query: 441 FSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +++DNM DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGI G +G
Sbjct: 122 YNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKG 168



 Score = 38.9 bits (89), Expect(2) = 7e-48
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELV +
Sbjct: 161 LGIWGGKGQGKSFQCELVMA 180


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Oryza sativa subsp. japonica
           GN=RCA PE=1 SV=2
          Length = 466

 Score =  169 bits (427), Expect(2) = 2e-47
 Identities = 83/121 (68%), Positives = 94/121 (77%)
 Frame = +3

Query: 219 SNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHA 398
           SNI +  V+    DEGKQT +DRW GLAYD SDDQQDITRGKG VD+LFQ   G GT  A
Sbjct: 39  SNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEA 98

Query: 399 VMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQ 578
           V+SSY+Y+SQG R +  DN   G+YIAPAFMDKLVVHI+KNFM LPNIKVPLILGI G +
Sbjct: 99  VLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGK 158

Query: 579 G 581
           G
Sbjct: 159 G 159



 Score = 41.2 bits (95), Expect(2) = 2e-47
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 152 LGIWGGKGQGKSFQCELVFA 171


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
           SV=2
          Length = 439

 Score =  160 bits (406), Expect(3) = 2e-47
 Identities = 78/108 (72%), Positives = 89/108 (82%)
 Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
           +E +QT KDRW GLAYD SDDQQDITRGKGMVD LFQ  +  GT +AVMSSY+Y+S G R
Sbjct: 65  EESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
              +DN+KDG+YIAPAF+DKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 125 --QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKG 170



 Score = 41.2 bits (95), Expect(3) = 2e-47
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



 Score = 28.1 bits (61), Expect(3) = 2e-47
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +1

Query: 154 STAPASAFFGASLKKTAPSVV 216
           ++AP SAFFG SLKK   S V
Sbjct: 25  ASAPTSAFFGTSLKKAVASRV 45


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
           activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
          Length = 442

 Score =  162 bits (409), Expect(3) = 4e-47
 Identities = 76/108 (70%), Positives = 86/108 (79%)
 Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
           D  KQT  DRW GL  D SDDQQDITRGKGMVD+LFQ   G GT HAV+ SY+Y+SQG R
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
            +++DN  DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGI G +G
Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKG 172



 Score = 40.8 bits (94), Expect(3) = 4e-47
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVF 615
           L  WGGKGQGKSFQCELVF
Sbjct: 165 LGIWGGKGQGKSFQCELVF 183



 Score = 26.6 bits (57), Expect(3) = 4e-47
 Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKK 198
           SV     VN TP+ + ++      P++AFFG +LKK
Sbjct: 4   SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKK 39


>sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase
           activase B, chloroplastic OS=Hordeum vulgare GN=RCAB
           PE=2 SV=1
          Length = 425

 Score =  166 bits (420), Expect(2) = 1e-46
 Identities = 79/121 (65%), Positives = 92/121 (76%)
 Frame = +3

Query: 219 SNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHA 398
           S + +        D+GKQT  DRW GLAYD SDDQQDITRGKG+VD+LFQ  +G GT  A
Sbjct: 36  SRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEA 95

Query: 399 VMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQ 578
           ++SSY+YISQG R +  DN  DG YIAPAFMDKL+VH+AKNFM LPNIKVPLILGI G +
Sbjct: 96  ILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGK 155

Query: 579 G 581
           G
Sbjct: 156 G 156



 Score = 41.2 bits (95), Expect(2) = 1e-46
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 149 LGIWGGKGQGKSFQCELVFA 168


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
          Length = 413

 Score =  166 bits (421), Expect(2) = 1e-46
 Identities = 78/119 (65%), Positives = 95/119 (79%)
 Frame = +3

Query: 225 IAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVM 404
           +  +F + A +DE KQT+KD+W GLA+DTSDDQQDITRGKG+ D LFQ  +G GT +AV+
Sbjct: 47  VTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVL 106

Query: 405 SSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           SSY+YIS G R +S DN  DG+YIAPAFMDKL VHI KNF+ LPNIKVPLILG+ G +G
Sbjct: 107 SSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKG 165



 Score = 40.8 bits (94), Expect(2) = 1e-46
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 568 WGGKGQGKSFQCELVFS 618
           WGGKGQGKSFQCELVF+
Sbjct: 161 WGGKGQGKSFQCELVFA 177


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
           PE=2 SV=1
          Length = 441

 Score =  160 bits (404), Expect(3) = 2e-46
 Identities = 74/108 (68%), Positives = 91/108 (84%)
 Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
           +E +QT+ DRW GLAYD SDDQQDITRGKG+VD+LFQ  +  GT +AV+SS+ Y+S G R
Sbjct: 65  EETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
            ++ DN+KDG+YIAPAF+DKLVVHIAKNFM LPNIKVPLILG+ G +G
Sbjct: 125 QYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKG 172



 Score = 40.8 bits (94), Expect(3) = 2e-46
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +1

Query: 568 WGGKGQGKSFQCELVFS 618
           WGGKGQGKSFQCELVF+
Sbjct: 168 WGGKGQGKSFQCELVFA 184



 Score = 26.6 bits (57), Expect(3) = 2e-46
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 154 STAPASAFFGASLKKTAPSVV 216
           ++ P+SAFFG SLKK   S V
Sbjct: 25  ASGPSSAFFGTSLKKVISSRV 45
tr_hit_id A9TJI2
Definition tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 110
Score (bit) 174.0
E-value 8.0e-50
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955930|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G15, 5'
         (619 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten...   174   8e-50
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ...   169   1e-49
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis...   169   1e-49
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea...   171   4e-49
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car...   169   4e-49
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea...   171   4e-49
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car...   169   4e-49
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea...   171   4e-49
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul...   169   7e-49
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul...   167   2e-48
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul...   167   2e-48
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome...   170   2e-48
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car...   164   5e-48
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car...   164   5e-48
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc...   167   1e-47
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul...   163   6e-47
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom...   166   6e-47
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=...   166   8e-47
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   172   8e-47
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ...   172   8e-47
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar...   172   8e-47
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   165   1e-46
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza...   169   2e-46
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen...   169   2e-46
tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy...   168   2e-46
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ...   165   4e-46
tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas...   167   6e-46
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten...   168   6e-46
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten...   169   8e-46
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch...   166   8e-46

>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
          Length = 471

 Score =  174 bits (441), Expect(3) = 8e-50
 Identities = 84/110 (76%), Positives = 95/110 (86%)
 Frame = +3

Query: 252 SEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQG 431
           +E E  +TK DRWAGL  D SDDQQDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQG
Sbjct: 51  AEAESSKTKVDRWAGLGNDISDDQQDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQG 110

Query: 432 QRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           QR +SMDN+KDG YIAPAFMDKLV+HIAKNFMNLP IKVPLILGI G +G
Sbjct: 111 QRTYSMDNIKDGLYIAPAFMDKLVIHIAKNFMNLPGIKVPLILGIWGGKG 160



 Score = 40.0 bits (92), Expect(3) = 8e-50
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELV S
Sbjct: 153 LGIWGGKGQGKSFQCELVMS 172



 Score = 27.7 bits (60), Expect(3) = 8e-50
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +1

Query: 145 RVRSTAPASAFFGASLKKTA 204
           RV+ST P+SAFFG   K +A
Sbjct: 17  RVKSTVPSSAFFGCKSKVSA 36


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
           PE=4 SV=1
          Length = 472

 Score =  169 bits (428), Expect(3) = 1e-49
 Identities = 82/115 (71%), Positives = 94/115 (81%)
 Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
           F V A  DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+
Sbjct: 54  FKVVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYE 113

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           Y+S G R +++DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 114 YLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKG 168



 Score = 42.4 bits (98), Expect(3) = 1e-49
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVFS
Sbjct: 161 LGIWGGKGQGKSFQCELVFS 180



 Score = 30.0 bits (66), Expect(3) = 1e-49
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTA 204
           +V     VN TP+ + S+      P+SAFFG+SLKK +
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVS 41


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039112 PE=4 SV=1
          Length = 472

 Score =  169 bits (428), Expect(3) = 1e-49
 Identities = 82/115 (71%), Positives = 94/115 (81%)
 Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
           F V A  DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ  +  GT +AVMSSY+
Sbjct: 54  FKVVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYE 113

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           Y+S G R +++DN  DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 114 YLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKG 168



 Score = 42.4 bits (98), Expect(3) = 1e-49
 Identities = 18/20 (90%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVFS
Sbjct: 161 LGIWGGKGQGKSFQCELVFS 180



 Score = 30.0 bits (66), Expect(3) = 1e-49
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTA 204
           +V     VN TP+ + S+      P+SAFFG+SLKK +
Sbjct: 4   TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVS 41


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 480

 Score =  171 bits (432), Expect(3) = 4e-49
 Identities = 82/118 (69%), Positives = 93/118 (78%)
 Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
           A HF V A  DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS
Sbjct: 54  ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +YDYIS  QR +  DN  DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



 Score = 41.2 bits (95), Expect(3) = 4e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



 Score = 27.7 bits (60), Expect(3) = 4e-49
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
           +V +  P++     +  T P++ FFG  LKKT+
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase large protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 474

 Score =  169 bits (427), Expect(3) = 4e-49
 Identities = 83/115 (72%), Positives = 95/115 (82%)
 Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
           F V A  DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYD
Sbjct: 55  FKVVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYD 114

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           YIS G R + ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGI G +G
Sbjct: 115 YISTGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKG 168



 Score = 41.2 bits (95), Expect(3) = 4e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



 Score = 29.6 bits (65), Expect(3) = 4e-49
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTA 204
           +V     +N  P+ +       ST P SAFFG SLKK A
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVA 42


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score =  171 bits (432), Expect(3) = 4e-49
 Identities = 82/118 (69%), Positives = 93/118 (78%)
 Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
           A HF V A  DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS
Sbjct: 54  ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +YDYIS  QR +  DN  DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



 Score = 41.2 bits (95), Expect(3) = 4e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



 Score = 27.7 bits (60), Expect(3) = 4e-49
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
           +V +  P++     +  T P++ FFG  LKKT+
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
           carboxylase/oxygenase activase small protein isoform
           OS=Acer rubrum PE=2 SV=1
          Length = 437

 Score =  169 bits (427), Expect(3) = 4e-49
 Identities = 83/115 (72%), Positives = 95/115 (82%)
 Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
           F V A  DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ   G GT +AVMSSYD
Sbjct: 55  FKVVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYD 114

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           YIS G R + ++N  DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGI G +G
Sbjct: 115 YISTGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKG 168



 Score = 41.2 bits (95), Expect(3) = 4e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



 Score = 29.6 bits (65), Expect(3) = 4e-49
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTA 204
           +V     +N  P+ +       ST P SAFFG SLKK A
Sbjct: 4   AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVA 42


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 363

 Score =  171 bits (432), Expect(3) = 4e-49
 Identities = 82/118 (69%), Positives = 93/118 (78%)
 Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
           A HF V A  DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ  +G GT + VMS
Sbjct: 54  ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +YDYIS  QR +  DN  DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



 Score = 41.2 bits (95), Expect(3) = 4e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



 Score = 27.7 bits (60), Expect(3) = 4e-49
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
           +V +  P++     +  T P++ FFG  LKKT+
Sbjct: 12  TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
           jackii PE=2 SV=1
          Length = 461

 Score =  169 bits (428), Expect(3) = 7e-49
 Identities = 81/114 (71%), Positives = 94/114 (82%)
 Frame = +3

Query: 240 VVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDY 419
           VV    DE KQT+KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + V+SSY+Y
Sbjct: 57  VVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEY 116

Query: 420 ISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +SQG R +++DNM DGYYIAPAFMDK+VVHI+KNFM+LPNIKVPLILGI G +G
Sbjct: 117 LSQGLRTYNLDNMMDGYYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170



 Score = 41.2 bits (95), Expect(3) = 7e-49
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



 Score = 28.5 bits (62), Expect(3) = 7e-49
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1

Query: 154 STAPASAFFGASLKKTAPS 210
           ST P SAFFG SLKK + S
Sbjct: 25  STVPTSAFFGNSLKKVSSS 43


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 475

 Score =  167 bits (424), Expect(3) = 2e-48
 Identities = 80/114 (70%), Positives = 94/114 (82%)
 Frame = +3

Query: 240 VVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDY 419
           VV    DE KQT+KDRW GL  D SDDQQDITRGKGMVD+LFQ   G GT + V+SSY+Y
Sbjct: 57  VVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEY 116

Query: 420 ISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
           +SQG R +++DNM DG+YIAPAFMDK+VVHI+KNFM+LPNIKVPLILGI G +G
Sbjct: 117 LSQGLRTYNLDNMMDGFYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170



 Score = 41.2 bits (95), Expect(3) = 2e-48
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
           L  WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



 Score = 28.5 bits (62), Expect(3) = 2e-48
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +1

Query: 154 STAPASAFFGASLKKTAPS 210
           ST P SAFFG SLKK + S
Sbjct: 25  STVPTSAFFGNSLKKVSSS 43