DK955930
Clone id TST39A01NGRL0024_G15
Library
Length 619
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_G15. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GAGCAGGCCTGCTCGAGCGGAGTTTGTTCGCCACTTGTCTCTCTAGACGAGGGCTTGTAG
CTTGCTGCTTCCATGGCGTCTACTGCCACTAGCCCTACTGTTGGCTCCGTCCAGAATTTC
ACACCAGTAAATGGAACCCCCGTCCGTGTAAGGAGCACCGCTCCTGCTTCTGCCTTCTTT
GGGGCCTCCCTGAAGAAAACCGCCCCTTCCGTTGTATTAGCAATATTGCCAAGCATTTCG
TTGTGCACGCTTCGGAGGATGAGGGCAAGCAGACGAAGAAGGACAGATGGGCTGGTCTTG
CATATGACACCTCCGATGACCAGCAAGACATCACTCGTGGAAAAGGCATGGTGGACGCTC
TTTTCCAAGGTGCAGTTGGTGTAGGAACTCAACACGCCGTCATGAGTTCGTATGACTATA
TTAGCCAGGGCCAGAGAATGTTCTCCATGGACAACATGAAGGATGGCTATTACATCGCCC
CTGCCTTCATGGACAAACTGGTTGTGCACATTGCCAAGAACTTCATGAACTTACCAAATA
TCAAGGTGCCTTTGATTCTTGGTATTTTGGGGTGGCAAGGGGCAAGGCAAGTCCTTCCAG
TGTGAGCTTGTCTTTTCAA
■■Homology search results ■■ -
sp_hit_id Q7X9A0
Definition sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata
Align length 117
Score (bit) 166.0
E-value 5.0e-49
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955930|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G15, 5'
(619 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase... 166 5e-49
sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase... 166 5e-49
sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase ... 168 1e-48
sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase ... 172 7e-48
sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase ... 169 2e-47
sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase ... 160 2e-47
sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 162 4e-47
sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase... 166 1e-46
sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase ... 166 1e-46
sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase ... 160 2e-46
sp|Q9ZT00|RCA_MAIZE Ribulose bisphosphate carboxylase/oxygenase ... 165 2e-46
sp|Q40565|RCA2_TOBAC Ribulose bisphosphate carboxylase/oxygenase... 159 4e-45
sp|Q40073|RCAA_HORVU Ribulose bisphosphate carboxylase/oxygenase... 159 9e-45
sp|O49074|RCA_SOLPN Ribulose bisphosphate carboxylase/oxygenase ... 153 1e-43
sp|P10871|RCA_SPIOL Ribulose bisphosphate carboxylase/oxygenase ... 139 2e-39
sp|P23489|RCA_CHLRE Ribulose bisphosphate carboxylase/oxygenase ... 120 4e-31
sp|Q06721|RCA_ANASC Ribulose bisphosphate carboxylase/oxygenase ... 62 5e-12
sp|P58555|RCA_ANASP Ribulose bisphosphate carboxylase/oxygenase ... 61 8e-12
sp|P85086|RCA_ARAHY Ribulose bisphosphate carboxylase/oxygenase ... 69 3e-11
sp|P17556|DHA_BACSH Alanine dehydrogenase OS=Bacillus sphaericus... 35 0.31
sp|Q571H0|NPA1P_MOUSE Nucleolar pre-ribosomal-associated protein... 34 0.69
sp|P85111|RCA_VITSX Ribulose bisphosphate carboxylase/oxygenase ... 32 2.0
sp|A6NM43|TCPQL_HUMAN Putative T-complex protein 1 subunit theta... 32 2.6
sp|Q4L750|DHA_STAHJ Alanine dehydrogenase OS=Staphylococcus haem... 32 3.4
sp|P08679|CISY2_YEAST Citrate synthase, peroxisomal OS=Saccharom... 32 3.4
sp|P17019|ZN708_HUMAN Zinc finger protein 708 OS=Homo sapiens GN... 31 4.5
sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegi... 31 5.8
sp|Q8CNW8|DHA_STAES Alanine dehydrogenase OS=Staphylococcus epid... 31 5.8
sp|Q5HNJ6|DHA_STAEQ Alanine dehydrogenase OS=Staphylococcus epid... 31 5.8
sp|Q80WB5|WDYHV_MOUSE WDYHV motif-containing protein 1 OS=Mus mu... 31 5.9

>sp|Q7X9A0|RCA1_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Larrea tridentata GN=RCA1
PE=2 SV=1
Length = 476

Score = 166 bits (419), Expect(3) = 5e-49
Identities = 81/117 (69%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Frame = +3

Query: 234 HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSS 410
+F + A E E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ + GT +AVMSS
Sbjct: 52 NFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSS 111

Query: 411 YDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
YDYISQG R +++DN DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGI G +G
Sbjct: 112 YDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKG 168



Score = 41.2 bits (95), Expect(3) = 5e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



Score = 28.9 bits (63), Expect(3) = 5e-49
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1

Query: 127 VNGTPVRVRSTAPASAFFGASLKKTA 204
+NG+ R S P++AFFG+SLKK+A
Sbjct: 18 LNGSGARA-SLVPSTAFFGSSLKKSA 42


>sp|Q7X999|RCA2_LARTR Ribulose bisphosphate carboxylase/oxygenase
activase 2, chloroplastic OS=Larrea tridentata GN=RCA2
PE=2 SV=1
Length = 435

Score = 166 bits (419), Expect(3) = 5e-49
Identities = 81/117 (69%), Positives = 95/117 (81%), Gaps = 1/117 (0%)
Frame = +3

Query: 234 HFVVHASE-DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSS 410
+F + A E E +QT KD+W GLAYD SDDQQDITRGKGMVD LFQ + GT +AVMSS
Sbjct: 52 NFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSS 111

Query: 411 YDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
YDYISQG R +++DN DG+YIAPAFMDKLVVHI KNF++LPNIK+PLILGI G +G
Sbjct: 112 YDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKG 168



Score = 41.2 bits (95), Expect(3) = 5e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



Score = 28.9 bits (63), Expect(3) = 5e-49
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1

Query: 127 VNGTPVRVRSTAPASAFFGASLKKTA 204
+NG+ R S P++AFFG+SLKK+A
Sbjct: 18 LNGSGARA-SLVPSTAFFGSSLKKSA 42


>sp|Q40281|RCA_MALDO Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Malus domestica GN=RCA PE=2
SV=1
Length = 437

Score = 168 bits (426), Expect(3) = 1e-48
Identities = 82/111 (73%), Positives = 90/111 (81%)
Frame = +3

Query: 249 ASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQ 428
AS DE KQT KDRW GLA+DTSDDQQDITRGKG VD+LFQ G GT A+MSSY+YIS
Sbjct: 58 ASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYIST 117

Query: 429 GQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
G R ++ DN DGYYIAPAFMDKLVVHI KNFM LPN+KVPLILGI G +G
Sbjct: 118 GLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKG 168



Score = 41.2 bits (95), Expect(3) = 1e-48
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



Score = 24.6 bits (52), Expect(3) = 1e-48
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1

Query: 100 VGSVQNFTPVNGTPVRVRSTAPASAFFGASLKK 198
+GSV N P N ++ P+S F G+SLKK
Sbjct: 8 IGSV-NRAPPNLNGSSSSASVPSSTFLGSSLKK 39


>sp|P10896|RCA_ARATH Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Arabidopsis thaliana GN=RCA
PE=1 SV=2
Length = 474

Score = 172 bits (436), Expect(2) = 7e-48
Identities = 80/107 (74%), Positives = 92/107 (85%)
Frame = +3

Query: 261 EGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQRM 440
E KQT DRW GLAYDTSDDQQDITRGKGMVD++FQ +G GT HAV+SSY+Y+SQG R
Sbjct: 62 EDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQ 121

Query: 441 FSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+++DNM DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGI G +G
Sbjct: 122 YNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKG 168



Score = 38.9 bits (89), Expect(2) = 7e-48
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELV +
Sbjct: 161 LGIWGGKGQGKSFQCELVMA 180


>sp|P93431|RCA_ORYSJ Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Oryza sativa subsp. japonica
GN=RCA PE=1 SV=2
Length = 466

Score = 169 bits (427), Expect(2) = 2e-47
Identities = 83/121 (68%), Positives = 94/121 (77%)
Frame = +3

Query: 219 SNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHA 398
SNI + V+ DEGKQT +DRW GLAYD SDDQQDITRGKG VD+LFQ G GT A
Sbjct: 39 SNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEA 98

Query: 399 VMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQ 578
V+SSY+Y+SQG R + DN G+YIAPAFMDKLVVHI+KNFM LPNIKVPLILGI G +
Sbjct: 99 VLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGK 158

Query: 579 G 581
G
Sbjct: 159 G 159



Score = 41.2 bits (95), Expect(2) = 2e-47
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 152 LGIWGGKGQGKSFQCELVFA 171


>sp|O98997|RCA_PHAAU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2
SV=2
Length = 439

Score = 160 bits (406), Expect(3) = 2e-47
Identities = 78/108 (72%), Positives = 89/108 (82%)
Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
+E +QT KDRW GLAYD SDDQQDITRGKGMVD LFQ + GT +AVMSSY+Y+S G R
Sbjct: 65 EESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+DN+KDG+YIAPAF+DKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 125 --QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKG 170



Score = 41.2 bits (95), Expect(3) = 2e-47
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



Score = 28.1 bits (61), Expect(3) = 2e-47
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1

Query: 154 STAPASAFFGASLKKTAPSVV 216
++AP SAFFG SLKK S V
Sbjct: 25 ASAPTSAFFGTSLKKAVASRV 45


>sp|Q40460|RCA1_TOBAC Ribulose bisphosphate carboxylase/oxygenase
activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
Length = 442

Score = 162 bits (409), Expect(3) = 4e-47
Identities = 76/108 (70%), Positives = 86/108 (79%)
Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
D KQT DRW GL D SDDQQDITRGKGMVD+LFQ G GT HAV+ SY+Y+SQG R
Sbjct: 65 DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+++DN DG+YIAPAFMDKLVVHI KNF+ LPNIKVPLILGI G +G
Sbjct: 125 QYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKG 172



Score = 40.8 bits (94), Expect(3) = 4e-47
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVF 615
L WGGKGQGKSFQCELVF
Sbjct: 165 LGIWGGKGQGKSFQCELVF 183



Score = 26.6 bits (57), Expect(3) = 4e-47
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKK 198
SV VN TP+ + ++ P++AFFG +LKK
Sbjct: 4 SVSTIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKK 39


>sp|Q42450|RCAB_HORVU Ribulose bisphosphate carboxylase/oxygenase
activase B, chloroplastic OS=Hordeum vulgare GN=RCAB
PE=2 SV=1
Length = 425

Score = 166 bits (420), Expect(2) = 1e-46
Identities = 79/121 (65%), Positives = 92/121 (76%)
Frame = +3

Query: 219 SNIAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHA 398
S + + D+GKQT DRW GLAYD SDDQQDITRGKG+VD+LFQ +G GT A
Sbjct: 36 SRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEA 95

Query: 399 VMSSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQ 578
++SSY+YISQG R + DN DG YIAPAFMDKL+VH+AKNFM LPNIKVPLILGI G +
Sbjct: 96 ILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGK 155

Query: 579 G 581
G
Sbjct: 156 G 156



Score = 41.2 bits (95), Expect(2) = 1e-46
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 149 LGIWGGKGQGKSFQCELVFA 168


>sp|Q01587|RCA_CUCSA Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Cucumis sativus PE=2 SV=1
Length = 413

Score = 166 bits (421), Expect(2) = 1e-46
Identities = 78/119 (65%), Positives = 95/119 (79%)
Frame = +3

Query: 225 IAKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVM 404
+ +F + A +DE KQT+KD+W GLA+DTSDDQQDITRGKG+ D LFQ +G GT +AV+
Sbjct: 47 VTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVL 106

Query: 405 SSYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
SSY+YIS G R +S DN DG+YIAPAFMDKL VHI KNF+ LPNIKVPLILG+ G +G
Sbjct: 107 SSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKG 165



Score = 40.8 bits (94), Expect(2) = 1e-46
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1

Query: 568 WGGKGQGKSFQCELVFS 618
WGGKGQGKSFQCELVF+
Sbjct: 161 WGGKGQGKSFQCELVFA 177


>sp|O64981|RCA_PHAVU Ribulose bisphosphate carboxylase/oxygenase
activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1
PE=2 SV=1
Length = 441

Score = 160 bits (404), Expect(3) = 2e-46
Identities = 74/108 (68%), Positives = 91/108 (84%)
Frame = +3

Query: 258 DEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQGQR 437
+E +QT+ DRW GLAYD SDDQQDITRGKG+VD+LFQ + GT +AV+SS+ Y+S G R
Sbjct: 65 EETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLR 124

Query: 438 MFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
++ DN+KDG+YIAPAF+DKLVVHIAKNFM LPNIKVPLILG+ G +G
Sbjct: 125 QYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKG 172



Score = 40.8 bits (94), Expect(3) = 2e-46
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1

Query: 568 WGGKGQGKSFQCELVFS 618
WGGKGQGKSFQCELVF+
Sbjct: 168 WGGKGQGKSFQCELVFA 184



Score = 26.6 bits (57), Expect(3) = 2e-46
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1

Query: 154 STAPASAFFGASLKKTAPSVV 216
++ P+SAFFG SLKK S V
Sbjct: 25 ASGPSSAFFGTSLKKVISSRV 45


tr_hit_id A9TJI2
Definition tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 110
Score (bit) 174.0
E-value 8.0e-50
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955930|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_G15, 5'
(619 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella paten... 174 8e-50
tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome ... 169 1e-49
tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis... 169 1e-49
tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea... 171 4e-49
tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate car... 169 4e-49
tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea... 171 4e-49
tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate car... 169 4e-49
tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea... 171 4e-49
tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Popul... 169 7e-49
tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Popul... 167 2e-48
tr|A9PJ06|A9PJ06_POPJC Putative uncharacterized protein OS=Popul... 167 2e-48
tr|A7PNR4|A7PNR4_VITVI Chromosome chr8 scaffold_23, whole genome... 170 2e-48
tr|Q06B48|Q06B48_ACERU Chloroplast ribulose-1,5-bisphosphate car... 164 5e-48
tr|Q06B49|Q06B49_ACERU Chloroplast ribulose-1,5-bisphosphate car... 164 5e-48
tr|A9UHW7|A9UHW7_IPOBA Rubisco activase OS=Ipomoea batatas GN=rc... 167 1e-47
tr|A9PGU7|A9PGU7_POPTR Putative uncharacterized protein OS=Popul... 163 6e-47
tr|A7PIQ8|A7PIQ8_VITVI Chromosome chr13 scaffold_17, whole genom... 166 6e-47
tr|O82428|O82428_DATGL Rubisco activase OS=Datisca glomerata PE=... 166 8e-47
tr|Q941B7|Q941B7_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 172 8e-47
tr|Q8H172|Q8H172_ARATH At2g39730/T5I7.3 OS=Arabidopsis thaliana ... 172 8e-47
tr|Q3EBJ5|Q3EBJ5_ARATH Uncharacterized protein At2g39730.3 OS=Ar... 172 8e-47
tr|Q9AXG1|Q9AXG1_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 165 1e-46
tr|B8BIM0|B8BIM0_ORYSI Putative uncharacterized protein OS=Oryza... 169 2e-46
tr|B7EAB2|B7EAB2_ORYSJ cDNA clone:J013001C24, full insert sequen... 169 2e-46
tr|Q9AXG0|Q9AXG0_GOSHI Ribulose-1,5-bisphosphate carboxylase/oxy... 168 2e-46
tr|B1PDJ9|B1PDJ9_CAPAN Chloroplast rubisco activase OS=Capsicum ... 165 4e-46
tr|Q9M4V3|Q9M4V3_WHEAT Ribulose bisphosphate carboxylase activas... 167 6e-46
tr|A9TLG8|A9TLG8_PHYPA Predicted protein OS=Physcomitrella paten... 168 6e-46
tr|A9TBP0|A9TBP0_PHYPA Predicted protein OS=Physcomitrella paten... 169 8e-46
tr|Q9ATC2|Q9ATC2_ZANAE Rubisco activase (Fragment) OS=Zantedesch... 166 8e-46

>tr|A9TJI2|A9TJI2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_195670 PE=4 SV=1
Length = 471

Score = 174 bits (441), Expect(3) = 8e-50
Identities = 84/110 (76%), Positives = 95/110 (86%)
Frame = +3

Query: 252 SEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDYISQG 431
+E E +TK DRWAGL D SDDQQDI RGKGMVDALFQGA G+GTQ+A+MSS+ Y+SQG
Sbjct: 51 AEAESSKTKVDRWAGLGNDISDDQQDIQRGKGMVDALFQGAQGLGTQNAIMSSWGYVSQG 110

Query: 432 QRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
QR +SMDN+KDG YIAPAFMDKLV+HIAKNFMNLP IKVPLILGI G +G
Sbjct: 111 QRTYSMDNIKDGLYIAPAFMDKLVIHIAKNFMNLPGIKVPLILGIWGGKG 160



Score = 40.0 bits (92), Expect(3) = 8e-50
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELV S
Sbjct: 153 LGIWGGKGQGKSFQCELVMS 172



Score = 27.7 bits (60), Expect(3) = 8e-50
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +1

Query: 145 RVRSTAPASAFFGASLKKTA 204
RV+ST P+SAFFG K +A
Sbjct: 17 RVKSTVPSSAFFGCKSKVSA 36


>tr|A7NYV5|A7NYV5_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024270001
PE=4 SV=1
Length = 472

Score = 169 bits (428), Expect(3) = 1e-49
Identities = 82/115 (71%), Positives = 94/115 (81%)
Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
F V A DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSY+
Sbjct: 54 FKVVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYE 113

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
Y+S G R +++DN DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 114 YLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKG 168



Score = 42.4 bits (98), Expect(3) = 1e-49
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVFS
Sbjct: 161 LGIWGGKGQGKSFQCELVFS 180



Score = 30.0 bits (66), Expect(3) = 1e-49
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTA 204
+V VN TP+ + S+ P+SAFFG+SLKK +
Sbjct: 4 TVSTIGAVNRTPLSLNSSGTGASVPSSAFFGSSLKKVS 41


>tr|A5C3D4|A5C3D4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039112 PE=4 SV=1
Length = 472

Score = 169 bits (428), Expect(3) = 1e-49
Identities = 82/115 (71%), Positives = 94/115 (81%)
Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
F V A DE +QT+KDRW GLAYD SDDQQDITRGKGMVD+LFQ + GT +AVMSSY+
Sbjct: 54 FKVVAEIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYE 113

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
Y+S G R +++DN DG+YIAPAFMDKLVVHI KNFM LPNIKVPLILGI G +G
Sbjct: 114 YLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKG 168



Score = 42.4 bits (98), Expect(3) = 1e-49
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVFS
Sbjct: 161 LGIWGGKGQGKSFQCELVFS 180



Score = 30.0 bits (66), Expect(3) = 1e-49
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTA-----PASAFFGASLKKTA 204
+V VN TP+ + S+ P+SAFFG+SLKK +
Sbjct: 4 TVSTIGAVNRTPLSLNSSGTGXSVPSSAFFGSSLKKVS 41


>tr|A9NV87|A9NV87_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 480

Score = 171 bits (432), Expect(3) = 4e-49
Identities = 82/118 (69%), Positives = 93/118 (78%)
Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
A HF V A DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS
Sbjct: 54 ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+YDYIS QR + DN DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



Score = 41.2 bits (95), Expect(3) = 4e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



Score = 27.7 bits (60), Expect(3) = 4e-49
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
+V + P++ + T P++ FFG LKKT+
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|Q06B50|Q06B50_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase large protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 474

Score = 169 bits (427), Expect(3) = 4e-49
Identities = 83/115 (72%), Positives = 95/115 (82%)
Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
F V A DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSYD
Sbjct: 55 FKVVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYD 114

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
YIS G R + ++N DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGI G +G
Sbjct: 115 YISTGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKG 168



Score = 41.2 bits (95), Expect(3) = 4e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



Score = 29.6 bits (65), Expect(3) = 4e-49
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTA 204
+V +N P+ + ST P SAFFG SLKK A
Sbjct: 4 AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVA 42


>tr|A9NX94|A9NX94_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 440

Score = 171 bits (432), Expect(3) = 4e-49
Identities = 82/118 (69%), Positives = 93/118 (78%)
Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
A HF V A DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS
Sbjct: 54 ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+YDYIS QR + DN DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



Score = 41.2 bits (95), Expect(3) = 4e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



Score = 27.7 bits (60), Expect(3) = 4e-49
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
+V + P++ + T P++ FFG LKKT+
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|Q06B51|Q06B51_ACERU Chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase activase small protein isoform
OS=Acer rubrum PE=2 SV=1
Length = 437

Score = 169 bits (427), Expect(3) = 4e-49
Identities = 83/115 (72%), Positives = 95/115 (82%)
Frame = +3

Query: 237 FVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYD 416
F V A DE KQT+KD+W GLAYDTSDDQQDITRGKG+VD+LFQ G GT +AVMSSYD
Sbjct: 55 FKVVAEIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVMSSYD 114

Query: 417 YISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
YIS G R + ++N DG+YIAPAFMDKLVVHI KNFM+LPNIK+PLILGI G +G
Sbjct: 115 YISTGLRTY-LENSMDGFYIAPAFMDKLVVHITKNFMSLPNIKIPLILGIWGGKG 168



Score = 41.2 bits (95), Expect(3) = 4e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 161 LGIWGGKGQGKSFQCELVFA 180



Score = 29.6 bits (65), Expect(3) = 4e-49
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVR------STAPASAFFGASLKKTA 204
+V +N P+ + ST P SAFFG SLKK A
Sbjct: 4 AVSTVGAINSAPLSLNGSGAAGSTVPTSAFFGTSLKKVA 42


>tr|A9NZT0|A9NZT0_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 363

Score = 171 bits (432), Expect(3) = 4e-49
Identities = 82/118 (69%), Positives = 93/118 (78%)
Frame = +3

Query: 228 AKHFVVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMS 407
A HF V A DEGKQT KD+W GLA+D SDDQ DI RGKG VD+LFQ +G GT + VMS
Sbjct: 54 ANHFKVVAEIDEGKQTDKDKWKGLAFDESDDQMDIRRGKGKVDSLFQAPMGSGTHNVVMS 113

Query: 408 SYDYISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+YDYIS QR + DN DGYYIAP+FMDKL+VHI+KNFMNLPNIKVPLILGI G +G
Sbjct: 114 TYDYISTAQRTYDFDNTMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKG 171



Score = 41.2 bits (95), Expect(3) = 4e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 164 LGIWGGKGQGKSFQCELVFA 183



Score = 27.7 bits (60), Expect(3) = 4e-49
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1

Query: 106 SVQNFTPVNGTPVRVRSTAPASAFFGASLKKTA 204
+V + P++ + T P++ FFG LKKT+
Sbjct: 12 TVSSNLPLSSGQASILKTVPSTGFFGCGLKKTS 44


>tr|A9PJF4|A9PJF4_POPJC Putative uncharacterized protein OS=Populus
jackii PE=2 SV=1
Length = 461

Score = 169 bits (428), Expect(3) = 7e-49
Identities = 81/114 (71%), Positives = 94/114 (82%)
Frame = +3

Query: 240 VVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDY 419
VV DE KQT+KDRW GL D SDDQQDITRGKGMVD+LFQ G GT + V+SSY+Y
Sbjct: 57 VVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEY 116

Query: 420 ISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+SQG R +++DNM DGYYIAPAFMDK+VVHI+KNFM+LPNIKVPLILGI G +G
Sbjct: 117 LSQGLRTYNLDNMMDGYYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170



Score = 41.2 bits (95), Expect(3) = 7e-49
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



Score = 28.5 bits (62), Expect(3) = 7e-49
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1

Query: 154 STAPASAFFGASLKKTAPS 210
ST P SAFFG SLKK + S
Sbjct: 25 STVPTSAFFGNSLKKVSSS 43


>tr|A9PFQ2|A9PFQ2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 475

Score = 167 bits (424), Expect(3) = 2e-48
Identities = 80/114 (70%), Positives = 94/114 (82%)
Frame = +3

Query: 240 VVHASEDEGKQTKKDRWAGLAYDTSDDQQDITRGKGMVDALFQGAVGVGTQHAVMSSYDY 419
VV DE KQT+KDRW GL D SDDQQDITRGKGMVD+LFQ G GT + V+SSY+Y
Sbjct: 57 VVAEEYDEEKQTEKDRWGGLVTDMSDDQQDITRGKGMVDSLFQAPQGTGTHNPVLSSYEY 116

Query: 420 ISQGQRMFSMDNMKDGYYIAPAFMDKLVVHIAKNFMNLPNIKVPLILGILGWQG 581
+SQG R +++DNM DG+YIAPAFMDK+VVHI+KNFM+LPNIKVPLILGI G +G
Sbjct: 117 LSQGLRTYNLDNMMDGFYIAPAFMDKIVVHISKNFMSLPNIKVPLILGIWGGKG 170



Score = 41.2 bits (95), Expect(3) = 2e-48
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1

Query: 559 LVFWGGKGQGKSFQCELVFS 618
L WGGKGQGKSFQCELVF+
Sbjct: 163 LGIWGGKGQGKSFQCELVFA 182



Score = 28.5 bits (62), Expect(3) = 2e-48
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1

Query: 154 STAPASAFFGASLKKTAPS 210
ST P SAFFG SLKK + S
Sbjct: 25 STVPTSAFFGNSLKKVSSS 43