DK955935 |
Clone id |
TST39A01NGRL0024_G20 |
Library |
TST39 |
Length |
557 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_G20. 5' end sequence. |
Accession |
DK955935 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL7Contig2 |
Sequence |
GGCAACTTCGGCACAGTTGAATTGAAAGTGGCTATGAGTTGCCAAGGTTGTGTTGGTGCA GTGAAGAGGGTGCTTGGGAAGATGGAAGGGGTAAATACATATGATATAGACTTGGATGCG CAGAAAGTGACTGTGAAAGGGAACGTCAAGCCAGAGGATGTTCTTTCTACTGTTTCCAAA ACTGGGAAAGCTACATCGTTTTGGCCAAGTGAAGGAAGTACAGCATCATAGTTTTATTTG TAAATTGATTTTTGGCTATTGTGACAAGAGCTATGCTCATGAAGTGGCTGATGATTAAAA AAAACTCTTGCATACTATACGACATATTTATGTCATGATCTTATTCCATCTTGCCAACTT GTGCGCCGTGGTATGATTAATGATATCACTATCCTATATGACATTAGTGTGGCTTTGTAC ATTTCAATCCTTTTGCCCATCAAGTTGTGGTACTGCATCTTGTATAGTTCTTTGACTCAT TCTACCCGCTATCCCCTCAAATCAGTGAAGAATTGGATTGTTTGATAGGCACATTTGAGA CTGTTTGTTGGTAGGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9XT28 |
Definition |
sp|Q9XT28|ATOX1_SHEEP Copper transport protein ATOX1 OS=Ovis aries |
Align length |
61 |
Score (bit) |
55.1 |
E-value |
2.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5ZF67 |
Definition |
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major |
Align length |
69 |
Score (bit) |
111.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955935|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_G20, 5' (557 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch... 111 2e-23 tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genom... 111 3e-23 tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea... 110 4e-23 tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana... 109 1e-22 tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populu... 108 3e-22 tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 108 3e-22 tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Popul... 108 3e-22 tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Popul... 108 3e-22 tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sat... 107 4e-22 tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum ... 107 4e-22 tr|Q70DK1|Q70DK1_HORVD Chopper chaperone OS=Hordeum vulgare var.... 107 4e-22 tr|Q6H759|Q6H759_ORYSJ Os02g0530100 protein OS=Oryza sativa subs... 107 4e-22 tr|Q5QL92|Q5QL92_ORYSJ cDNA clone:001-016-H06, full insert seque... 107 4e-22 tr|B6ST82|B6ST82_MAIZE Putative uncharacterized protein OS=Zea m... 107 4e-22 tr|B6SQL3|B6SQL3_MAIZE Putative uncharacterized protein OS=Zea m... 107 4e-22 tr|B6SHX8|B6SHX8_MAIZE Putative uncharacterized protein OS=Zea m... 107 4e-22 tr|B2CM19|B2CM19_SOLCH Copper chaperone OS=Solanum chacoense PE=... 107 4e-22 tr|A2X5L0|A2X5L0_ORYSI Putative uncharacterized protein OS=Oryza... 107 4e-22 tr|A9P875|A9P875_POPTR Putative uncharacterized protein OS=Popul... 107 6e-22 tr|O82089|O82089_ARATH Copper homeostasis factor (AT3g56240/F18O... 106 7e-22 tr|B6T1K0|B6T1K0_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 105 1e-21 tr|A1ECK4|A1ECK4_9ROSI Putative copper chaperone OS=Citrus hybri... 105 2e-21 tr|Q6ZCF3|Q6ZCF3_ORYSJ Os08g0205400 protein OS=Oryza sativa subs... 103 6e-21 tr|A2YSB2|A2YSB2_ORYSI Putative uncharacterized protein OS=Oryza... 103 6e-21 tr|A9SR07|A9SR07_PHYPA Predicted protein OS=Physcomitrella paten... 102 1e-20 tr|Q9C7U6|Q9C7U6_ARATH Copper homeostasis factor, putative; 2714... 101 3e-20 tr|Q9SE03|Q9SE03_SOYBN Copper chaperone homolog CCH OS=Glycine m... 100 5e-20 tr|B7FJ81|B7FJ81_MEDTR Putative uncharacterized protein OS=Medic... 98 3e-19 tr|B2MUN5|B2MUN5_9CARY Copper chaperone protein OS=Knorringia si... 98 3e-19 tr|B5M1W7|B5M1W7_RHEAU Copper homeostasis factor OS=Rheum austra... 96 1e-18
>tr|Q5ZF67|Q5ZF67_PLAMJ Copper chaperone OS=Plantago major GN=cch1 PE=4 SV=1 Length = 109
Score = 111 bits (278), Expect = 2e-23 Identities = 53/69 (76%), Positives = 59/69 (85%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TVELKV MSCQGCVGAVKRVLGKMEGV ++DID++ QKVTVKGNV+ E VL TVSKTGK Sbjct: 4 TVELKVGMSCQGCVGAVKRVLGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKTGKK 63
Query: 193 TSFWPSEGS 219 T FWP E + Sbjct: 64 TEFWPEEAA 72
>tr|A7QBE3|A7QBE3_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034927001 PE=4 SV=1 Length = 134
Score = 111 bits (277), Expect = 3e-23 Identities = 54/71 (76%), Positives = 60/71 (84%) Frame = +1
Query: 7 FGTVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTG 186 F TV LKV MSC+GCVGAVKRVLGKMEGV ++DIDL QKVTVKGNV+P+ VL TVSKTG Sbjct: 50 FDTVVLKVGMSCEGCVGAVKRVLGKMEGVESFDIDLKEQKVTVKGNVQPDAVLKTVSKTG 109
Query: 187 KATSFWPSEGS 219 K TSFW +E S Sbjct: 110 KKTSFWEAEAS 120
>tr|A9NJS2|A9NJS2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 75
Score = 110 bits (276), Expect = 4e-23 Identities = 54/71 (76%), Positives = 58/71 (81%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVL KMEGV TYD++L QKVTVKGNVKP+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLNKMEGVETYDVNLKEQKVTVKGNVKPDAVLQTVSKTGKE 63
Query: 193 TSFWPSEGSTA 225 TSFWP E A Sbjct: 64 TSFWPEEKDIA 74
>tr|Q94BT9|Q94BT9_ARATH At1g66240/T6J19_6 OS=Arabidopsis thaliana GN=At1g66240 PE=4 SV=1 Length = 106
Score = 109 bits (272), Expect = 1e-22 Identities = 50/71 (70%), Positives = 62/71 (87%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV L+VAM+C+GCVGAVKRVLGKMEGV ++D+D+ QKVTVKGNV+P+ VL TV+KTGK Sbjct: 34 TVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKTGKK 93
Query: 193 TSFWPSEGSTA 225 T+FW +EG TA Sbjct: 94 TAFWEAEGETA 104
>tr|Q6J338|Q6J338_9ROSI Copper chaperone OS=Populus alba x Populus tremula var. glandulosa GN=CCH PE=4 SV=1 Length = 85
Score = 108 bits (269), Expect = 3e-22 Identities = 52/67 (77%), Positives = 58/67 (86%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 193 TSFWPSE 213 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|B6SPL7|B6SPL7_MAIZE Copper chaperone OS=Zea mays PE=4 SV=1 Length = 84
Score = 108 bits (269), Expect = 3e-22 Identities = 52/71 (73%), Positives = 59/71 (83%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVLGKMEGV +YD+D+ QKVTVKGNV P+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDVDIMEQKVTVKGNVTPDAVLQTVSKTGKK 63
Query: 193 TSFWPSEGSTA 225 TSFW +E T+ Sbjct: 64 TSFWEAEAVTS 74
>tr|A9PIL5|A9PIL5_POPJC Putative uncharacterized protein OS=Populus jackii PE=4 SV=1 Length = 85
Score = 108 bits (269), Expect = 3e-22 Identities = 52/67 (77%), Positives = 58/67 (86%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 193 TSFWPSE 213 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|A9PCL8|A9PCL8_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 85
Score = 108 bits (269), Expect = 3e-22 Identities = 52/67 (77%), Positives = 58/67 (86%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVLGKMEGV +YDIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKTGKK 63
Query: 193 TSFWPSE 213 T+FW +E Sbjct: 64 TAFWEAE 70
>tr|Q9SE04|Q9SE04_ORYSA Copper chaperone homolog CCH OS=Oryza sativa PE=2 SV=1 Length = 132
Score = 107 bits (267), Expect = 4e-22 Identities = 51/64 (79%), Positives = 55/64 (85%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSCQGC GAV+RVL KMEGV T+DID++ QKVTVKGNVKPEDV TVSKTGK Sbjct: 5 TVVLKVGMSCQGCAGAVRRVLTKMEGVETFDIDMEQQKVTVKGNVKPEDVFQTVSKTGKK 64
Query: 193 TSFW 204 TSFW Sbjct: 65 TSFW 68
>tr|Q84KJ2|Q84KJ2_SOLLC Copper chaperone OS=Solanum lycopersicum GN=LeCCH PE=4 SV=1 Length = 81
Score = 107 bits (267), Expect = 4e-22 Identities = 52/64 (81%), Positives = 56/64 (87%) Frame = +1
Query: 13 TVELKVAMSCQGCVGAVKRVLGKMEGVNTYDIDLDAQKVTVKGNVKPEDVLSTVSKTGKA 192 TV LKV MSC+GCVGAVKRVLGKMEGV T+DIDL QKVTVKGNV+P+ VL TVSKTGK Sbjct: 4 TVVLKVGMSCEGCVGAVKRVLGKMEGVETFDIDLKEQKVTVKGNVQPDAVLKTVSKTGKP 63
Query: 193 TSFW 204 TSFW Sbjct: 64 TSFW 67
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