DK955938 |
Clone id |
TST39A01NGRL0024_G23 |
Library |
TST39 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_G23. 5' end sequence. |
Accession |
DK955938 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL228Contig1 |
Sequence |
CCTCTGTTCGCAGTCCCGTGATCATGAATCCTGAATATGACTATCTTTTCAAACTTTTGC TGATTGGTGATTCGGGCGTTGGGAAATCTTGCCTTTTGCTTCGGTTTGCTGATGATTCTT ATCTGGAAAGCTACATCAGCACAATTGGTGTCGACTTTAAAATTCGCACAGTTGAACTTG ACAGCAAAACCATCAAGCTACAGATTTGGGACACTGCTGGTCAAGAGCGATTTCGGACAA TCACAAGCAGCTATTATCGGGGAGCTCATGGCATTATTATCGTTTATGACGTTACAGACC AGGAAAGCTTCAACAATGTAAAGCAGTGGTTGAATGAAATTGATCGTTATGCTAGTGAAA ATGTGAACAAACTTTTGGTTGGGAACAAGAGCGATTTGACAGCAAAGAAAGTTGTTGATA CACAAACTGCTAAGGCATATGCTGATGAAATTGGCATTCCCTTTCTGGAAACGAGTGCAA AGAATGCGAGTAATGTGGAGGAAGCATTTATGACCATGGCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q05737 |
Definition |
sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays |
Align length |
161 |
Score (bit) |
301.0 |
E-value |
2.0e-81 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKP5 |
Definition |
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
161 |
Score (bit) |
309.0 |
E-value |
4.0e-83 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955938|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_G23, 5' (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea... 309 4e-83 tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 307 2e-82 tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomi... 306 3e-82 tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medic... 302 5e-81 tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea m... 302 7e-81 tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica... 301 9e-81 tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sat... 301 1e-80 tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequ... 301 1e-80 tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert seque... 301 1e-80 tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Popul... 301 1e-80 tr|A7R0F4|A7R0F4_VITVI Chromosome undetermined scaffold_306, who... 301 1e-80 tr|A2WLD6|A2WLD6_ORYSI Putative uncharacterized protein OS=Oryza... 301 1e-80 tr|Q2A9V7|Q2A9V7_BRAOL GTP-binding protein, putative OS=Brassica... 301 2e-80 tr|B4FQY4|B4FQY4_MAIZE Putative uncharacterized protein OS=Zea m... 301 2e-80 tr|A9NPH9|A9NPH9_PICSI Putative uncharacterized protein OS=Picea... 301 2e-80 tr|Q1WK27|Q1WK27_CHLIN YptC1 OS=Chlamydomonas incerta GN=yptC1 P... 300 3e-80 tr|A9P8E1|A9P8E1_POPTR Putative uncharacterized protein OS=Popul... 300 3e-80 tr|A8JHQ7|A8JHQ7_CHLRE Small rab-related GTPase OS=Chlamydomonas... 300 3e-80 tr|Q9FPJ4|Q9FPJ4_ARATH AT5g47200 (Ras-related small GTP-binding ... 300 3e-80 tr|Q9SXT5|Q9SXT5_CICAR Rab-type small GTP-binding protein OS=Cic... 299 4e-80 tr|Q9SEH3|Q9SEH3_ARATH Ras-related small GTP-binding protein (Ra... 299 6e-80 tr|Q8W4S8|Q8W4S8_ARATH AT4g17530/dl4800c OS=Arabidopsis thaliana... 299 6e-80 tr|Q08153|Q08153_PEA GTP-binding protein OS=Pisum sativum PE=2 SV=1 299 6e-80 tr|Q40203|Q40203_LOTJA RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1 298 1e-79 tr|O24112|O24112_NICPL Small GTP-binding protein OS=Nicotiana pl... 298 1e-79 tr|B6RB23|B6RB23_HALDI Ras-related protein Rab-1A OS=Haliotis di... 298 1e-79 tr|A7PBQ0|A7PBQ0_VITVI Chromosome chr16 scaffold_10, whole genom... 297 2e-79 tr|Q68V18|Q68V18_POAPR RAB1-like OS=Poa pratensis GN=rab1-1 PE=2... 296 3e-79 tr|A9PBJ4|A9PBJ4_POPTR Putative uncharacterized protein OS=Popul... 296 5e-79 tr|Q7ZXF7|Q7ZXF7_XENLA Rab1-prov protein OS=Xenopus laevis GN=ra... 295 6e-79
>tr|A9NKP5|A9NKP5_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 202
Score = 309 bits (792), Expect = 4e-83 Identities = 154/161 (95%), Positives = 158/161 (98%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NK+DLTAKKVVD QTAKA+ADEIGIPFLETSAKNA NVE+A Sbjct: 121 NKNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDA 161
>tr|A9SLS3|A9SLS3_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD11 PE=3 SV=1 Length = 204
Score = 307 bits (787), Expect = 2e-82 Identities = 152/161 (94%), Positives = 158/161 (98%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDL +KKVVD +TAKA+ADEIGIPFLETSAKNA+NVE+A Sbjct: 121 NKSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQA 161
>tr|A9SMJ7|A9SMJ7_PHYPA Rab1/RabD-family small GTPase OS=Physcomitrella patens subsp. patens GN=RabD12 PE=3 SV=1 Length = 203
Score = 306 bits (785), Expect = 3e-82 Identities = 153/161 (95%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELD KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDL +KKVVD TAKA+ADEIGIPFLETSAKNA+NVE+A Sbjct: 121 NKSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQA 161
>tr|B7FH02|B7FH02_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 202
Score = 302 bits (774), Expect = 5e-81 Identities = 149/161 (92%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDL+ KKVV ++TAKA+ADEIGIPF+ETSAKNASNVE+A Sbjct: 121 NKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQA 161
>tr|B4FC26|B4FC26_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 203
Score = 302 bits (773), Expect = 7e-81 Identities = 149/161 (92%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDLTA KVV T+TAKA+ADE+GIPF+ETSAKNA+NVE+A Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQA 161
>tr|Q2A9H3|Q2A9H3_BRAOL GTP-binding protein, putative OS=Brassica oleracea GN=27.t00047 PE=3 SV=1 Length = 202
Score = 301 bits (772), Expect = 9e-81 Identities = 148/161 (91%), Positives = 156/161 (96%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGII+ YDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NK DLT++KVV T+TAKA+ADE+GIPFLETSAKNA+NVEEA Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEA 161
>tr|Q949E2|Q949E2_ORYSA Putative GTP-binding protein OS=Oryza sativa GN=W455ERIPDK PE=3 SV=1 Length = 203
Score = 301 bits (771), Expect = 1e-80 Identities = 148/161 (91%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDLTA KVV ++TAKA+ADE+GIPF+ETSAKNA+NVE+A Sbjct: 121 NKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQA 161
>tr|Q6H8G2|Q6H8G2_ORYSJ cDNA, clone: J100058B03, full insert sequence OS=Oryza sativa subsp. japonica GN=P0491E01.39 PE=2 SV=1 Length = 203
Score = 301 bits (771), Expect = 1e-80 Identities = 148/161 (91%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDLTA KVV ++TAKA+ADE+GIPF+ETSAKNA+NVE+A Sbjct: 121 NKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQA 161
>tr|Q0JQ62|Q0JQ62_ORYSJ cDNA clone:006-208-C02, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0179700 PE=2 SV=1 Length = 203
Score = 301 bits (771), Expect = 1e-80 Identities = 148/161 (91%), Positives = 157/161 (97%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NKSDLTA KVV ++TAKA+ADE+GIPF+ETSAKNA+NVE+A Sbjct: 121 NKSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQA 161
>tr|A9PEC2|A9PEC2_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 203
Score = 301 bits (771), Expect = 1e-80 Identities = 149/161 (92%), Positives = 155/161 (96%) Frame = +3
Query: 24 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDSKTIKLQ 203 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVE D KTIKLQ Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60
Query: 204 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 383 IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
Query: 384 NKSDLTAKKVVDTQTAKAYADEIGIPFLETSAKNASNVEEA 506 NK DLTA KVV +TAKA+ADEIGIPF+ETSAKNA+NVE+A Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQA 161
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