BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955942|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_H03, 5'
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A7ZEX8|MNMC_CAMC1 tRNA 5-methylaminomethyl-2-thiouridine bios...    30   6.2  

>sp|A7ZEX8|MNMC_CAMC1 tRNA 5-methylaminomethyl-2-thiouridine
           biosynthesis bifunctional protein mnmC OS=Campylobacter
           concisus (strain 13826) GN=mnmC PE=3 SV=1
          Length = 621

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
 Frame = +2

Query: 167 QIDFRKLIWWIIGFSNATNG--WTM*GPHEISSSFHELSGVGGFAKLASPSDRDYLGLR- 337
           ++DF   IW++ GF+ + NG  W+     ++      LS VG  A+  S +    +GL+ 
Sbjct: 144 ELDFAADIWFLDGFAPSKNGSIWS----EDVFKQIARLSRVGTIARTYSCAKIVKVGLKN 199

Query: 338 AGFLPSI 358
           AGFL S+
Sbjct: 200 AGFLLSL 206

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK955942|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_H03, 5'
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6TAR5|B6TAR5_MAIZE Prenyl transferase OS=Zea mays PE=2 SV=1        34   4.7  
tr|Q1DLV9|Q1DLV9_COCIM Putative uncharacterized protein OS=Cocci...    34   4.7  
tr|Q0C475|Q0C475_HYPNA Conserved domain protein OS=Hyphomonas ne...    33   8.1  
tr|Q8VYL4|Q8VYL4_ARATH Putative uncharacterized protein At2g3715...    33   8.1  
tr|B3V685|B3V685_9EURY Putative uncharacterized protein OS=uncul...    33   8.1  

>tr|B6TAR5|B6TAR5_MAIZE Prenyl transferase OS=Zea mays PE=2 SV=1
          Length = 407

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 163 LICLSCYCSFVEKKSKAEI--GHALSCFCMSRWVSTNLPKKRRRT 35
           ++ LSC C  V   SK  +  GH ++  C SRW     P +RRRT
Sbjct: 1   MLSLSCSCPGVSSMSKTALDWGHLVAS-CRSRWHGARAPPRRRRT 44


>tr|Q1DLV9|Q1DLV9_COCIM Putative uncharacterized protein
           OS=Coccidioides immitis GN=CIMG_08704 PE=4 SV=1
          Length = 828

 Score = 34.3 bits (77), Expect = 4.7
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -3

Query: 187 QLSEIDLQLICLSCYCSFVEKKSKAEIGHALSCFCMSRWVST 62
           Q+SE D  LICLS Y +  E +  A+ GH     C+  W++T
Sbjct: 757 QISENDRCLICLSDYAAEEEVRLLAKCGHIYHRECIDEWLTT 798


>tr|Q0C475|Q0C475_HYPNA Conserved domain protein OS=Hyphomonas
           neptunium (strain ATCC 15444) GN=HNE_0740 PE=4 SV=1
          Length = 166

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 407 GLLNSVLIHHVVLPNFLI*RNICKRKGLIEHPEP 508
           G LN VL H  +LP+  + R + K  GLI+HP+P
Sbjct: 129 GQLNQVLCHDELLPSRRMLRPVQKDAGLIQHPKP 162


>tr|Q8VYL4|Q8VYL4_ARATH Putative uncharacterized protein At2g37150
           OS=Arabidopsis thaliana GN=At2g37150 PE=2 SV=1
          Length = 546

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = -3

Query: 220 CSIGETNYPPYQLSEIDLQLICLSCYCSFVEKKSKAEI---GHALSCFCMSRWVSTNLPK 50
           C +    YP YQ  E   Q  C  C   + EK+   E+   GH     C+ +W+S    K
Sbjct: 474 CLLATMYYPSYQTEE---QRKCAICLEEYKEKEELGEVKGCGHDYHGRCIKKWLSM---K 527

Query: 49  KRRRTCKRGALP 14
                CK  ALP
Sbjct: 528 NSCPICKSPALP 539


>tr|B3V685|B3V685_9EURY Putative uncharacterized protein
           OS=uncultured marine group III euryarchaeote
           SAT1000-53-B3 PE=4 SV=1
          Length = 492

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 22/76 (28%), Positives = 34/76 (44%)
 Frame = -3

Query: 271 FVKRGRDFVWSSHCPTICSIGETNYPPYQLSEIDLQLICLSCYCSFVEKKSKAEIGHALS 92
           +VK+ + ++++     ICS  E  YPP    E+          CS ++ K   E    +S
Sbjct: 144 YVKKYKLYIYALEKGLICSGTEPQYPPQLWDEV----------CSSLKLKESKETLFGVS 193

Query: 91  CFCMSRWVSTNLPKKR 44
            FC S   S  +P KR
Sbjct: 194 VFCGSIQKSITIPYKR 209