DK955944 |
Clone id |
TST39A01NGRL0024_H05 |
Library |
TST39 |
Length |
535 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_H05. 5' end sequence. |
Accession |
DK955944 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL2965Contig1 |
Sequence |
GAGCAATGTGCGCATCGTCCACAGAGAGACTAGCCGCATTTTGTACATCGAAAACCAGGG CTCTGAGTGATAGCTCAGCTTTATGGCGCGCGCCATGCCTTAGCCATCGACGCCTTCATT TCCGTCATCATCGTAAGCAGTCTCATCAGCTCACTATGGCAGCCTCTGATGGCGCTCTTG CTGCCTCAGACGTAGACAATTCCTCGACCTCTGCATGCATAGCGCCTGCCTCAGCAATCG ACTTTCTCATGCTCTGCCAGCGCCTCAAGGCAACAAAGCGAACAGGATGGGTAAATCATG GACTTAAGAACACTGAGTCTATTGCTGATCACATGCATCGTATGGCTGTAATGGCAATTA TAGCTGCAGGATTCCCAGGGATCGACAGAGATAAGTGTGTGAAGATGGCAGTAGTTCATG ATATTGCTGAAGCGATAGTTGGTGATATCACACCCTCATGTGGTGTACCAAAAGAAGAGA AAAGTAGACGAGAAAGAGCTGCTGTTGACGAAATGTGCATGTTGCTCGGGCGGGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7Z4H3 |
Definition |
sp|Q7Z4H3|HDDC2_HUMAN HD domain-containing protein 2 OS=Homo sapiens |
Align length |
110 |
Score (bit) |
101.0 |
E-value |
3.0e-21 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NZ14 |
Definition |
tr|A9NZ14|A9NZ14_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
110 |
Score (bit) |
168.0 |
E-value |
1.0e-40 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955944|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_H05, 5' (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NZ14|A9NZ14_PICSI Putative uncharacterized protein OS=Picea... 168 1e-40 tr|A9RWL9|A9RWL9_PHYPA Predicted protein OS=Physcomitrella paten... 167 3e-40 tr|A9NTN1|A9NTN1_PICSI Putative uncharacterized protein OS=Picea... 164 3e-39 tr|A9TQ88|A9TQ88_PHYPA Predicted protein OS=Physcomitrella paten... 160 4e-38 tr|B6TWI3|B6TWI3_MAIZE HD domain containing protein OS=Zea mays ... 160 5e-38 tr|Q6ETL6|Q6ETL6_ORYSJ Os02g0179100 protein OS=Oryza sativa subs... 157 4e-37 tr|A3A3S2|A3A3S2_ORYSJ Putative uncharacterized protein OS=Oryza... 157 4e-37 tr|Q8LQ52|Q8LQ52_ORYSJ Metal-dependent phosphohydrolase HD domai... 156 5e-37 tr|B8ACC8|B8ACC8_ORYSI Putative uncharacterized protein OS=Oryza... 156 5e-37 tr|B7FAI0|B7FAI0_ORYSJ cDNA, clone: J100074E09, full insert sequ... 156 5e-37 tr|A2ZVW5|A2ZVW5_ORYSJ Putative uncharacterized protein OS=Oryza... 156 5e-37 tr|B8AIW4|B8AIW4_ORYSI Putative uncharacterized protein OS=Oryza... 155 9e-37 tr|Q93ZV1|Q93ZV1_ARATH Putative uncharacterized protein At1g2616... 155 2e-36 tr|B6SZF6|B6SZF6_MAIZE HDDC2 protein OS=Zea mays PE=2 SV=1 154 3e-36 tr|A7PFI5|A7PFI5_VITVI Chromosome chr11 scaffold_14, whole genom... 154 3e-36 tr|Q6DBH4|Q6DBH4_ARATH At2g23820 OS=Arabidopsis thaliana GN=At2g... 150 3e-35 tr|Q3EBV0|Q3EBV0_ARATH Uncharacterized protein At2g23820.1 OS=Ar... 150 3e-35 tr|Q0WUF2|Q0WUF2_ARATH Putative uncharacterized protein At2g2382... 150 3e-35 tr|O82212|O82212_ARATH Putative uncharacterized protein At2g2382... 150 3e-35 tr|A7P2Y6|A7P2Y6_VITVI Chromosome chr1 scaffold_5, whole genome ... 147 3e-34 tr|Q9C661|Q9C661_ARATH Putative uncharacterized protein F28B23.1... 131 2e-29 tr|A5C8V3|A5C8V3_VITVI Putative uncharacterized protein OS=Vitis... 129 1e-28 tr|A8HWS3|A8HWS3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 115 1e-24 tr|A7RN12|A7RN12_NEMVE Predicted protein OS=Nematostella vectens... 112 9e-24 tr|B4M9P9|B4M9P9_DROVI GJ18362 OS=Drosophila virilis GN=GJ18362 ... 106 7e-22 tr|B6P304|B6P304_BRAFL Putative uncharacterized protein OS=Branc... 105 1e-21 tr|B6P9P6|B6P9P6_BRAFL Putative uncharacterized protein OS=Branc... 104 2e-21 tr|B7PTA6|B7PTA6_IXOSC HD domain-containing protein, putative (F... 103 7e-21 tr|B4GJ32|B4GJ32_DROPE GL25580 OS=Drosophila persimilis GN=GL255... 102 9e-21 tr|B8CBS4|B8CBS4_THAPS Predicted protein (Fragment) OS=Thalassio... 102 1e-20
>tr|A9NZ14|A9NZ14_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 283
Score = 168 bits (426), Expect = 1e-40 Identities = 81/110 (73%), Positives = 95/110 (86%) Frame = +3
Query: 201 SSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRMAVMAIIAAGFPG 380 SS+ + +P+SAIDFL LCQ LK TKRTGWVNHG++N ESIADHM+RMA MA+I A G Sbjct: 84 SSSYSPPSPSSAIDFLTLCQMLKTTKRTGWVNHGIQNAESIADHMYRMAAMALIVADASG 143
Query: 381 IDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCMLLG 530 I+RD+CVKMA+VHDIAEAIVGDITPS G+PKEEKSRRER A+DEMC +LG Sbjct: 144 INRDRCVKMAIVHDIAEAIVGDITPSDGIPKEEKSRREREALDEMCRVLG 193
>tr|A9RWL9|A9RWL9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_120560 PE=4 SV=1 Length = 203
Score = 167 bits (423), Expect = 3e-40 Identities = 86/121 (71%), Positives = 101/121 (83%) Frame = +3
Query: 165 SDGALAASDVDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRM 344 SDGA A + NSS S ++PASAI FL L QRLK TKRTGWVNHG+K++ESIADHM+RM Sbjct: 6 SDGATAFEN--NSSVS--LSPASAIQFLTLIQRLKTTKRTGWVNHGVKDSESIADHMYRM 61
Query: 345 AVMAIIAAGFPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCML 524 AVMAII+ PG+++D+CVKMAVVHDIAEAIVGDITP+ VPKEEK+R E AA+DEMC L Sbjct: 62 AVMAIISGDLPGVNKDRCVKMAVVHDIAEAIVGDITPNDNVPKEEKNRLESAAIDEMCQL 121
Query: 525 L 527 L Sbjct: 122 L 122
>tr|A9NTN1|A9NTN1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 197
Score = 164 bits (414), Expect = 3e-39 Identities = 84/125 (67%), Positives = 98/125 (78%) Frame = +3
Query: 156 MAASDGALAASDVDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADHM 335 MA DG+ + VD S+S SAIDFL LCQRLK TKRTGW+ G+++ ESIADHM Sbjct: 1 MAGIDGS-TSHGVDGPSSS------SAIDFLTLCQRLKTTKRTGWIYRGIRDPESIADHM 53
Query: 336 HRMAVMAIIAAGFPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEM 515 +RMA MA+IA PGI+RDKC+KMA+VHDIAEAIVGDI PS GVPKEEKSRRER A+DEM Sbjct: 54 YRMAAMALIAVDIPGINRDKCIKMAIVHDIAEAIVGDIAPSDGVPKEEKSRRERQALDEM 113
Query: 516 CMLLG 530 C +LG Sbjct: 114 CGILG 118
>tr|A9TQ88|A9TQ88_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_224383 PE=4 SV=1 Length = 193
Score = 160 bits (405), Expect = 4e-38 Identities = 76/112 (67%), Positives = 95/112 (84%) Frame = +3
Query: 192 VDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRMAVMAIIAAG 371 +++ S+S ++PA+AI FL L QRLK TKRTGWVNHG+K +ESIADHM+RMAVMAII+ Sbjct: 1 MNSRSSSNSLSPAAAIQFLTLIQRLKTTKRTGWVNHGVKESESIADHMYRMAVMAIISGD 60
Query: 372 FPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCMLL 527 PG+++D+CVKMAVVHDIAEAIVGDITP+ + KEEK+R E AA+DEMC LL Sbjct: 61 LPGVNKDRCVKMAVVHDIAEAIVGDITPNDNISKEEKNRLENAAIDEMCQLL 112
>tr|B6TWI3|B6TWI3_MAIZE HD domain containing protein OS=Zea mays PE=2 SV=1 Length = 282
Score = 160 bits (404), Expect = 5e-38 Identities = 74/108 (68%), Positives = 90/108 (83%) Frame = +3
Query: 207 TSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRMAVMAIIAAGFPGID 386 TS + ASAIDFL LC RLK TKR GW+NH +K ESIADHM+RMA+MA+IA P +D Sbjct: 68 TSVPSSAASAIDFLTLCHRLKTTKRKGWINHSIKGPESIADHMYRMALMALIAGDLPAVD 127
Query: 387 RDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCMLLG 530 R++C+K+A+VHDIAEAIVGDITPS G+PK EKSRRE+AA+DEMC +LG Sbjct: 128 RERCIKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQAALDEMCQVLG 175
>tr|Q6ETL6|Q6ETL6_ORYSJ Os02g0179100 protein OS=Oryza sativa subsp. japonica GN=P0544B02.15 PE=2 SV=1 Length = 228
Score = 157 bits (396), Expect = 4e-37 Identities = 81/121 (66%), Positives = 96/121 (79%), Gaps = 3/121 (2%) Frame = +3
Query: 177 LAASDVDNSSTSACIAPASA--IDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRMAV 350 LAAS +S + + APASA IDFL LC RLK TKR GWV G++ ES+ADHM+RM V Sbjct: 31 LAASMSSSSPSPSPAAPASASAIDFLTLCYRLKTTKRAGWVRRGVQGPESVADHMYRMGV 90
Query: 351 MAIIAAGFP-GIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCMLL 527 MA++AA P G++RD+CVKMA+VHDIAEAIVGDITPS GVPKEEKSRRE+ A+D MC LL Sbjct: 91 MALVAADLPSGVNRDRCVKMAIVHDIAEAIVGDITPSDGVPKEEKSRREQEALDHMCSLL 150
Query: 528 G 530 G Sbjct: 151 G 151
>tr|A3A3S2|A3A3S2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_005444 PE=4 SV=1 Length = 255
Score = 157 bits (396), Expect = 4e-37 Identities = 81/121 (66%), Positives = 96/121 (79%), Gaps = 3/121 (2%) Frame = +3
Query: 177 LAASDVDNSSTSACIAPASA--IDFLMLCQRLKATKRTGWVNHGLKNTESIADHMHRMAV 350 LAAS +S + + APASA IDFL LC RLK TKR GWV G++ ES+ADHM+RM V Sbjct: 31 LAASMSSSSPSPSPAAPASASAIDFLTLCYRLKTTKRAGWVRRGVQGPESVADHMYRMGV 90
Query: 351 MAIIAAGFP-GIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDEMCMLL 527 MA++AA P G++RD+CVKMA+VHDIAEAIVGDITPS GVPKEEKSRRE+ A+D MC LL Sbjct: 91 MALVAADLPSGVNRDRCVKMAIVHDIAEAIVGDITPSDGVPKEEKSRREQEALDHMCSLL 150
Query: 528 G 530 G Sbjct: 151 G 151
>tr|Q8LQ52|Q8LQ52_ORYSJ Metal-dependent phosphohydrolase HD domain-containing protein-like (Os01g0641100 protein) OS=Oryza sativa subsp. japonica GN=P0039G05.15 PE=4 SV=1 Length = 461
Score = 156 bits (395), Expect = 5e-37 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +3
Query: 153 TMAASDGALAASDVDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADH 332 T A +D A AA ++A + +SAIDFL LC RLK TKR GW+NH +K ESIADH Sbjct: 143 TPAPADAAAAAPP-----SAAASSASSAIDFLTLCHRLKTTKRKGWINHSIKGPESIADH 197
Query: 333 MHRMAVMAIIAAGFPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDE 512 M+RMA+MA+IA P +DR++C+K+A+VHDIAEAIVGDITPS G+PK EKSRRE+ A++E Sbjct: 198 MYRMALMALIAGDLPAVDRERCIKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQKALNE 257
Query: 513 MCMLLG 530 MC +LG Sbjct: 258 MCEVLG 263
>tr|B8ACC8|B8ACC8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03023 PE=4 SV=1 Length = 379
Score = 156 bits (395), Expect = 5e-37 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +3
Query: 153 TMAASDGALAASDVDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADH 332 T A +D A AA ++A + +SAIDFL LC RLK TKR GW+NH +K ESIADH Sbjct: 61 TPAPADAAAAAPP-----SAAASSASSAIDFLTLCHRLKTTKRKGWINHSIKGPESIADH 115
Query: 333 MHRMAVMAIIAAGFPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDE 512 M+RMA+MA+IA P +DR++C+K+A+VHDIAEAIVGDITPS G+PK EKSRRE+ A++E Sbjct: 116 MYRMALMALIAGDLPAVDRERCIKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQKALNE 175
Query: 513 MCMLLG 530 MC +LG Sbjct: 176 MCEVLG 181
>tr|B7FAI0|B7FAI0_ORYSJ cDNA, clone: J100074E09, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1 Length = 265
Score = 156 bits (395), Expect = 5e-37 Identities = 76/126 (60%), Positives = 97/126 (76%) Frame = +3
Query: 153 TMAASDGALAASDVDNSSTSACIAPASAIDFLMLCQRLKATKRTGWVNHGLKNTESIADH 332 T A +D A AA ++A + +SAIDFL LC RLK TKR GW+NH +K ESIADH Sbjct: 61 TPAPADAAAAAPP-----SAAASSASSAIDFLTLCHRLKTTKRKGWINHSIKGPESIADH 115
Query: 333 MHRMAVMAIIAAGFPGIDRDKCVKMAVVHDIAEAIVGDITPSCGVPKEEKSRRERAAVDE 512 M+RMA+MA+IA P +DR++C+K+A+VHDIAEAIVGDITPS G+PK EKSRRE+ A++E Sbjct: 116 MYRMALMALIAGDLPAVDRERCIKIAIVHDIAEAIVGDITPSDGIPKAEKSRREQKALNE 175
Query: 513 MCMLLG 530 MC +LG Sbjct: 176 MCEVLG 181
|