DK955960 |
Clone id |
TST39A01NGRL0024_H21 |
Library |
TST39 |
Length |
615 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_H21. 5' end sequence. |
Accession |
DK955960 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL979Contig1 |
Sequence |
CTCACACACACACACACACACACGAGTTGGGCGCTTGCGCGCGCGTGTACAACGAACTCG AACTCTGATCTTGCCCGGCAGGTGCCAGAGTTTTCTGTTATATAAACCGGAAGAGCGTCA GCGTCGCTAGTCTGCACAGCGAATGGGGCTCTTGGGGCTTGCAAAGAAGATGCCAGCCTC ACCTCCAGCATGCTTGCCTGCGCTTTGCCCTCCCCCTTCCTGCTTCATTCCTTCAAGCTC TTGTCTCAGAAGAAGAGCTTGCTTTCCCGCTCCCTTAGCTGGAGGAGCTAAAGGGAGAGA TTGGATGCAGGCTGCAGATCAGTGGCAATCCAAACGGCTCTTGATTGTGATGAACGCTGT CGAAAATCAAGGCAATGTTGCCACGGAAGATATGAGTGACAATAAGATTTTACCGTATTG CAGCATCGACAAGAAAGCAGATAAGCGCTCTTTAGGGGAACTTGAGGCAGAGTTTCTGGA AGCTCTCCAGTCATTCTACTATGACAAGAAACCTATGATGTCCAATGAAGAGTTTGACAA CCTCAAGGAGGAACTCATCTGGGAGGGCAGCAGTGTGGTTATCTTAAGTGCTGATGAGCA GAGGTTTATGGAAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8GYC7 |
Definition |
sp|Q8GYC7|PGL1B_ARATH PGR5-like protein 1B, chloroplastic OS=Arabidopsis thaliana |
Align length |
92 |
Score (bit) |
96.7 |
E-value |
9.0e-20 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NWM0 |
Definition |
tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
113 |
Score (bit) |
110.0 |
E-value |
5.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955960|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_H21, 5' (615 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea... 110 5e-23 tr|A7QKC6|A7QKC6_VITVI Chromosome chr2 scaffold_112, whole genom... 107 7e-22 tr|Q84M73|Q84M73_ORYSJ Os03g0857400 protein OS=Oryza sativa subs... 96 2e-18 tr|B8ANS3|B8ANS3_ORYSI Putative uncharacterized protein OS=Oryza... 96 2e-18 tr|A3APX8|A3APX8_ORYSJ Putative uncharacterized protein OS=Oryza... 96 2e-18 tr|A9T0F2|A9T0F2_PHYPA Predicted protein OS=Physcomitrella paten... 95 3e-18 tr|A9PGK5|A9PGK5_POPTR Putative uncharacterized protein OS=Popul... 95 3e-18 tr|B4FY30|B4FY30_MAIZE Putative uncharacterized protein OS=Zea m... 94 5e-18 tr|B4FTA7|B4FTA7_MAIZE Putative uncharacterized protein OS=Zea m... 94 5e-18 tr|B8B8V8|B8B8V8_ORYSI Putative uncharacterized protein OS=Oryza... 94 8e-18 tr|Q7F1E4|Q7F1E4_ORYSJ Os08g0526300 protein OS=Oryza sativa subs... 92 2e-17 tr|Q6YS51|Q6YS51_ORYSJ Os08g0310500 protein OS=Oryza sativa subs... 77 6e-13 tr|A8ITK6|A8ITK6_CHLRE Predicted protein OS=Chlamydomonas reinha... 75 3e-12 tr|A2Y1Z1|A2Y1Z1_ORYSI Putative uncharacterized protein OS=Oryza... 72 3e-11 tr|A3BV17|A3BV17_ORYSJ Putative uncharacterized protein OS=Oryza... 65 4e-09 tr|B8CCJ2|B8CCJ2_THAPS Predicted protein OS=Thalassiosira pseudo... 45 0.003 tr|B7FRN6|B7FRN6_PHATR Predicted protein OS=Phaeodactylum tricor... 44 0.007 tr|B8BZQ3|B8BZQ3_THAPS Putative uncharacterized protein OS=Thala... 42 0.022 tr|Q4TF20|Q4TF20_TETNG Chromosome undetermined SCAF4908, whole g... 30 6.6 tr|B4KAR3|B4KAR3_DROMO GI10734 OS=Drosophila mojavensis GN=GI107... 30 7.4 tr|Q00ZC0|Q00ZC0_OSTTA Putative heme activated protein (ISS) OS=... 34 7.7
>tr|A9NWM0|A9NWM0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 350
Score = 110 bits (276), Expect = 5e-23 Identities = 59/113 (52%), Positives = 75/113 (66%), Gaps = 13/113 (11%) Frame = +2
Query: 314 ADQWQSKR-----------LLIVMNAVENQ--GNVATEDMSDNKILPYCSIDKKADKRSX 454 +++WQS+ LIVM A E Q G V E++ DN ILPYCSIDKK++KR+ Sbjct: 42 SEEWQSRSGRCYTTTTKRPPLIVMQATEQQQQGQVKEEEIVDNNILPYCSIDKKSEKRTL 101
Query: 455 XXXXXXXXXXXQSFYYDKKPMMSNEEFDNLKEELIWEGSSVVILSADEQRFME 613 QSFY++KK M+NEEFD+LKEEL+WEGSSVV+LS DEQ+FME Sbjct: 102 GELEQDFLEALQSFYFEKKSTMTNEEFDHLKEELMWEGSSVVMLSPDEQKFME 154
>tr|A7QKC6|A7QKC6_VITVI Chromosome chr2 scaffold_112, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001064001 PE=4 SV=1 Length = 326
Score = 107 bits (266), Expect = 7e-22 Identities = 56/97 (57%), Positives = 70/97 (72%), Gaps = 2/97 (2%) Frame = +2
Query: 329 SKRLLIVMN--AVENQGNVATEDMSDNKILPYCSIDKKADKRSXXXXXXXXXXXXQSFYY 502 S+RL I+ + QG V +D+ D+KILPYCSIDKK +KRS QSFYY Sbjct: 52 SRRLFIISPKATADQQGQVQGDDVVDSKILPYCSIDKK-EKRSIGEMEQDFLQALQSFYY 110
Query: 503 DKKPMMSNEEFDNLKEELIWEGSSVVILSADEQRFME 613 + K +MSNEEFDNLKEEL+WEGSSVV+LS+DEQ+F+E Sbjct: 111 EGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQKFLE 147
>tr|Q84M73|Q84M73_ORYSJ Os03g0857400 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0059G06.17 PE=2 SV=1 Length = 324
Score = 95.9 bits (237), Expect = 2e-18 Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 3/125 (2%) Frame = +2
Query: 248 RRRACFPAPLAGGAKGRDWMQAADQWQSKRLLIVMNAVENQGNVATEDMSDNKILPYCSI 427 RR +C A G + R + A DQ Q QG +++ D+ +L YCSI Sbjct: 37 RRSSCALATSTRGRRLR--LGATDQQQQ------------QGKQDGDEVVDSNVLQYCSI 82
Query: 428 D---KKADKRSXXXXXXXXXXXXQSFYYDKKPMMSNEEFDNLKEELIWEGSSVVILSADE 598 D KKA+KRS Q+FYYD+K +MSNEEFDNLKEEL+WEGSSVV+LS DE Sbjct: 83 DGKGKKAEKRSLGEMEQEFLQALQAFYYDQKAIMSNEEFDNLKEELMWEGSSVVMLSPDE 142
Query: 599 QRFME 613 QR +E Sbjct: 143 QRLLE 147
>tr|B8ANS3|B8ANS3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14406 PE=4 SV=1 Length = 322
Score = 95.9 bits (237), Expect = 2e-18 Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 3/125 (2%) Frame = +2
Query: 248 RRRACFPAPLAGGAKGRDWMQAADQWQSKRLLIVMNAVENQGNVATEDMSDNKILPYCSI 427 RR +C A G + R + A DQ Q QG +++ D+ +L YCSI Sbjct: 35 RRSSCALATSTRGRRLR--LGATDQQQQ------------QGKQDGDEVVDSNVLQYCSI 80
Query: 428 D---KKADKRSXXXXXXXXXXXXQSFYYDKKPMMSNEEFDNLKEELIWEGSSVVILSADE 598 D KKA+KRS Q+FYYD+K +MSNEEFDNLKEEL+WEGSSVV+LS DE Sbjct: 81 DGKGKKAEKRSLGEMEQEFLQALQAFYYDQKAIMSNEEFDNLKEELMWEGSSVVMLSPDE 140
Query: 599 QRFME 613 QR +E Sbjct: 141 QRLLE 145
>tr|A3APX8|A3APX8_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012850 PE=4 SV=1 Length = 299
Score = 95.9 bits (237), Expect = 2e-18 Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 3/125 (2%) Frame = +2
Query: 248 RRRACFPAPLAGGAKGRDWMQAADQWQSKRLLIVMNAVENQGNVATEDMSDNKILPYCSI 427 RR +C A G + R + A DQ Q QG +++ D+ +L YCSI Sbjct: 35 RRSSCALATSTRGRRLR--LGATDQQQQ------------QGKQDGDEVVDSNVLQYCSI 80
Query: 428 D---KKADKRSXXXXXXXXXXXXQSFYYDKKPMMSNEEFDNLKEELIWEGSSVVILSADE 598 D KKA+KRS Q+FYYD+K +MSNEEFDNLKEEL+WEGSSVV+LS DE Sbjct: 81 DGKGKKAEKRSLGEMEQEFLQALQAFYYDQKAIMSNEEFDNLKEELMWEGSSVVMLSPDE 140
Query: 599 QRFME 613 QR +E Sbjct: 141 QRLLE 145
>tr|A9T0F2|A9T0F2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_138266 PE=4 SV=1 Length = 287
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/88 (54%), Positives = 60/88 (68%) Frame = +2
Query: 350 MNAVENQGNVATEDMSDNKILPYCSIDKKADKRSXXXXXXXXXXXXQSFYYDKKPMMSNE 529 M A N + ++ D+K+LPYC I+KK K++ QSFY+D KP+MSNE Sbjct: 1 MQASSNGNDPGSDSEVDDKVLPYCDINKK-QKKTLGEMEQDFLEALQSFYFDSKPIMSNE 59
Query: 530 EFDNLKEELIWEGSSVVILSADEQRFME 613 EFD LKEEL WEGSSVVILS+DEQRF+E Sbjct: 60 EFDLLKEELTWEGSSVVILSSDEQRFLE 87
>tr|A9PGK5|A9PGK5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 323
Score = 95.1 bits (235), Expect = 3e-18 Identities = 48/86 (55%), Positives = 60/86 (69%) Frame = +2
Query: 356 AVENQGNVATEDMSDNKILPYCSIDKKADKRSXXXXXXXXXXXXQSFYYDKKPMMSNEEF 535 A + V +DM D KIL YCSIDKK K+S Q+FYY+ K +MSNEEF Sbjct: 60 ADQQTDQVQEDDMDDGKILQYCSIDKKG-KKSLGEMEQDFLQALQAFYYEGKAIMSNEEF 118
Query: 536 DNLKEELIWEGSSVVILSADEQRFME 613 DNLKEEL+W+GSSVV+LS+DEQ+F+E Sbjct: 119 DNLKEELMWQGSSVVMLSSDEQKFLE 144
>tr|B4FY30|B4FY30_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 157
Score = 94.4 bits (233), Expect = 5e-18 Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 2/90 (2%) Frame = +2
Query: 350 MNAVENQGNVATED--MSDNKILPYCSIDKKADKRSXXXXXXXXXXXXQSFYYDKKPMMS 523 + A E QG V +D + D ILPYCSID+K K++ Q+FYYD+K +MS Sbjct: 56 LRATEQQGQVQEQDDEVVDRNILPYCSIDRK-QKKTLGEMEQEFLQALQAFYYDQKAIMS 114
Query: 524 NEEFDNLKEELIWEGSSVVILSADEQRFME 613 NEEFDNLKEEL+WEGSSVV+L+ DEQ+ +E Sbjct: 115 NEEFDNLKEELMWEGSSVVMLNEDEQKLLE 144
>tr|B4FTA7|B4FTA7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 322
Score = 94.4 bits (233), Expect = 5e-18 Identities = 48/90 (53%), Positives = 62/90 (68%), Gaps = 2/90 (2%) Frame = +2
Query: 350 MNAVENQGNVATED--MSDNKILPYCSIDKKADKRSXXXXXXXXXXXXQSFYYDKKPMMS 523 + A E QG V +D + D ILPYCSID+K K++ Q+FYYD+K +MS Sbjct: 56 LRATEQQGQVQEQDDEVVDRNILPYCSIDRK-QKKTLGEMEQEFLQALQAFYYDQKAIMS 114
Query: 524 NEEFDNLKEELIWEGSSVVILSADEQRFME 613 NEEFDNLKEEL+WEGSSVV+L+ DEQ+ +E Sbjct: 115 NEEFDNLKEELMWEGSSVVMLNEDEQKLLE 144
>tr|B8B8V8|B8B8V8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29970 PE=4 SV=1 Length = 326
Score = 93.6 bits (231), Expect = 8e-18 Identities = 52/102 (50%), Positives = 67/102 (65%) Frame = +2
Query: 308 QAADQWQSKRLLIVMNAVENQGNVATEDMSDNKILPYCSIDKKADKRSXXXXXXXXXXXX 487 QAADQ Q ++ EN+ V D+ +LPYCSI++K +K++ Sbjct: 54 QAADQQQQQQ-------EENEDGVV-----DSNVLPYCSINRK-EKKTIGEMEQEFLQAL 100
Query: 488 QSFYYDKKPMMSNEEFDNLKEELIWEGSSVVILSADEQRFME 613 Q+FYYDKK +MSNEEFDNLKEEL+WEGSSVV+LS DEQR +E Sbjct: 101 QAFYYDKKAVMSNEEFDNLKEELMWEGSSVVMLSPDEQRLLE 142
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