DK955963 |
Clone id |
TST39A01NGRL0024_H24 |
Library |
TST39 |
Length |
604 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_H24. 5' end sequence. |
Accession |
DK955963 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
CGACAACTTCTGCAAGTCTTAGGTGTAAAGCGAGCCTCGAGGTATGTATGATGGTTATGT ATTGACACTCGATCGCATCACAGAGCATCTGCCGTCAGGACTCAGGACTCAGGAGTCTGC AATCTGGAGACTGGGCGAAGCATGAGCTCGGTTGTGCCACAGAATGTGCAGTGCGGCCAT CAGCACTCCCTTCCTCACTCCCTATGTAGCGTTACCGCTCTTTTACGATTCCGCTTCTTA GCTTGCAGTGGAACCGCTGCGATCAACAGTTACAGCACTTATGGATTCCTGCCCTCCTCA GCATTCAATCGGGCTGCAGCTTCCAGGAAATGTGGCAGGCGTAGGATGAATGTGCGTGCA GTAGCAGGTTTCCCCTCTGTATCACCACCACTGGTTGCTCCGTCAAGTCATTGGGGCATG TGGAGCGTTCTCCTTTGCATCGCAGCATTTGGAATATGGTCTGAGAAGGCAACACATTGG GGAAGTGTGCTGAGTGGGGCACTCGTTAGTACTCTCGTAGGACTTGCAGCCAGCAATATG GGCCTCATAGCGACAGACGCCCCAGCATACTCCATTGTCAACCAGTATTTACTACCACTA TCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7RTW8 |
Definition |
sp|Q7RTW8|OTOAN_HUMAN Otoancorin OS=Homo sapiens |
Align length |
42 |
Score (bit) |
30.8 |
E-value |
5.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SIN5 |
Definition |
tr|A9SIN5|A9SIN5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
64 |
Score (bit) |
96.3 |
E-value |
1.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955963|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_H24, 5' (604 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SIN5|A9SIN5_PHYPA Predicted protein (Fragment) OS=Physcomit... 96 1e-18 tr|A7QG58|A7QG58_VITVI Chromosome undetermined scaffold_91, whol... 87 6e-16 tr|A7QG57|A7QG57_VITVI Chromosome undetermined scaffold_91, whol... 85 4e-15 tr|A5BMV9|A5BMV9_VITVI Putative uncharacterized protein OS=Vitis... 85 4e-15 tr|Q5VS59|Q5VS59_ORYSJ cDNA clone:J013161L13, full insert sequen... 80 9e-14 tr|B8B1I8|B8B1I8_ORYSI Putative uncharacterized protein OS=Oryza... 80 9e-14 tr|Q9LTG3|Q9LTG3_ARATH Similarity to unknown protein (Putative u... 80 1e-13 tr|Q9FLW1|Q9FLW1_ARATH Similarity to unknown protein OS=Arabidop... 73 1e-11 tr|A4RVI9|A4RVI9_OSTLU Predicted protein OS=Ostreococcus lucimar... 67 6e-10 tr|Q5VS60|Q5VS60_ORYSJ Os06g0107100 protein OS=Oryza sativa subs... 58 4e-07 tr|B0G864|B0G864_9FIRM Putative uncharacterized protein OS=Dorea... 57 8e-07 tr|A4IMQ8|A4IMQ8_GEOTN Putative uncharacterized protein OS=Geoba... 52 2e-05 tr|B4BKP6|B4BKP6_9BACI Putative uncharacterized protein OS=Geoba... 52 2e-05 tr|Q4L9U3|Q4L9U3_STAHJ Similar to unknown protein OS=Staphylococ... 51 5e-05 tr|B0S035|B0S035_FINM2 Putative uncharacterized protein OS=Fineg... 51 5e-05 tr|A1KVK3|A1KVK3_NEIMF Putative integral membrane protein OS=Nei... 51 6e-05 tr|B7BSA4|B7BSA4_9CLOT Putative uncharacterized protein OS=Clost... 51 6e-05 tr|B0NHN2|B0NHN2_EUBSP Putative uncharacterized protein OS=Clost... 51 6e-05 tr|Q4A0F3|Q4A0F3_STAS1 Putative uncharacterized protein OS=Staph... 50 1e-04 tr|A3B7L7|A3B7L7_ORYSJ Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|Q186J8|Q186J8_CLOD6 Putative membrane protein OS=Clostridium ... 49 3e-04 tr|O31634|O31634_BACSU YjcL protein OS=Bacillus subtilis GN=yjcL... 47 9e-04 tr|Q0ANM6|Q0ANM6_MARMM Putative uncharacterized protein OS=Maric... 47 0.001 tr|B8C2C6|B8C2C6_THAPS Predicted protein OS=Thalassiosira pseudo... 45 0.003 tr|A8JFJ3|A8JFJ3_CHLRE Predicted protein (Fragment) OS=Chlamydom... 45 0.004 tr|Q2BBG0|Q2BBG0_9BACI Putative uncharacterized protein OS=Bacil... 44 0.006 tr|Q65L67|Q65L67_BACLD Conserved membrane protein YjcL OS=Bacill... 44 0.007 tr|A3UDF3|A3UDF3_9RHOB Putative uncharacterized protein OS=Ocean... 44 0.010 tr|A3UEF3|A3UEF3_9RHOB Putative uncharacterized protein OS=Ocean... 43 0.016 tr|A7HQK7|A7HQK7_PARL1 Putative uncharacterized protein OS=Parvi... 42 0.021
>tr|A9SIN5|A9SIN5_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_43710 PE=4 SV=1 Length = 374
Score = 96.3 bits (238), Expect = 1e-18 Identities = 46/64 (71%), Positives = 55/64 (85%) Frame = +1
Query: 412 WGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQYL 591 WG W+VLL AFG+WSEK T WGS LSGALVSTLVGL ASN+G+IA++APAY IVN++L Sbjct: 14 WGTWTVLLAAGAFGLWSEK-TKWGSALSGALVSTLVGLFASNVGIIASEAPAYVIVNKFL 72
Query: 592 LPLS 603 LPL+ Sbjct: 73 LPLA 76
>tr|A7QG58|A7QG58_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037710001 PE=4 SV=1 Length = 449
Score = 87.4 bits (215), Expect = 6e-16 Identities = 43/64 (67%), Positives = 51/64 (79%) Frame = +1
Query: 412 WGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQYL 591 WG W+ L AFGIWSEK T GS LSGALVSTLVGLAASN+G+I+ +APAYS+V +L Sbjct: 82 WGTWTALFATGAFGIWSEK-TKIGSALSGALVSTLVGLAASNLGIISCEAPAYSVVLNFL 140
Query: 592 LPLS 603 LPL+ Sbjct: 141 LPLA 144
>tr|A7QG57|A7QG57_VITVI Chromosome undetermined scaffold_91, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00037709001 PE=4 SV=1 Length = 494
Score = 84.7 bits (208), Expect = 4e-15 Identities = 40/65 (61%), Positives = 51/65 (78%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQY 588 HWG W+ L AFG+WSEK T GS++S ALVS LVG+AASN+G+I DAPAYSIV ++ Sbjct: 126 HWGTWTALFATGAFGLWSEK-TKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEF 184
Query: 589 LLPLS 603 LLP++ Sbjct: 185 LLPIT 189
>tr|A5BMV9|A5BMV9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024875 PE=4 SV=1 Length = 1230
Score = 84.7 bits (208), Expect = 4e-15 Identities = 40/65 (61%), Positives = 51/65 (78%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQY 588 HWG W+ L AFG+WSEK T GS++S ALVS LVG+AASN+G+I DAPAYSIV ++ Sbjct: 126 HWGTWTALFATGAFGLWSEK-TKIGSMVSAALVSILVGMAASNLGIIPYDAPAYSIVMEF 184
Query: 589 LLPLS 603 LLP++ Sbjct: 185 LLPIT 189
>tr|Q5VS59|Q5VS59_ORYSJ cDNA clone:J013161L13, full insert sequence OS=Oryza sativa subsp. japonica GN=P0644B06.44-1 PE=2 SV=1 Length = 441
Score = 80.1 bits (196), Expect = 9e-14 Identities = 36/63 (57%), Positives = 44/63 (69%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQY 588 HWG W+ LL AAFG WSE++T WG+ LSG+LVS + GLAA+ GL+ APA V Y Sbjct: 70 HWGNWAFLLSAAAFGTWSEESTSWGAALSGSLVSIMAGLAATATGLVTAGAPAQDAVMDY 129
Query: 589 LLP 597 LLP Sbjct: 130 LLP 132
>tr|B8B1I8|B8B1I8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21316 PE=4 SV=1 Length = 407
Score = 80.1 bits (196), Expect = 9e-14 Identities = 36/63 (57%), Positives = 44/63 (69%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQY 588 HWG W+ LL AAFG WSE++T WG+ LSG+LVS + GLAA+ GL+ APA V Y Sbjct: 70 HWGNWAFLLSAAAFGTWSEESTSWGAALSGSLVSIMAGLAATATGLVTAGAPAQDAVMDY 129
Query: 589 LLP 597 LLP Sbjct: 130 LLP 132
>tr|Q9LTG3|Q9LTG3_ARATH Similarity to unknown protein (Putative uncharacterized protein At5g52540) (Putative uncharacterized protein At5g52540; F6N7.1) OS=Arabidopsis thaliana GN=At5g52540/F6N7.1 PE=2 SV=1 Length = 461
Score = 79.7 bits (195), Expect = 1e-13 Identities = 37/64 (57%), Positives = 50/64 (78%) Frame = +1
Query: 412 WGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQYL 591 WG W+ L A G+WSEK T G+ +SGALVSTLVGLAASN+G+I++ APA+++V +L Sbjct: 91 WGTWTALFATGALGLWSEK-TKVGAAMSGALVSTLVGLAASNLGIISSQAPAFAVVLNFL 149
Query: 592 LPLS 603 LPL+ Sbjct: 150 LPLA 153
>tr|Q9FLW1|Q9FLW1_ARATH Similarity to unknown protein OS=Arabidopsis thaliana GN=At5g24000 PE=4 SV=1 Length = 443
Score = 73.2 bits (178), Expect = 1e-11 Identities = 34/63 (53%), Positives = 44/63 (69%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVSTLVGLAASNMGLIATDAPAYSIVNQY 588 HW W+ L AFG+WSEK T GS++SGAL STL+GLAASN+ LI + P+Y ++ Sbjct: 74 HWSQWAALFAAGAFGVWSEK-TKIGSMVSGALTSTLLGLAASNLRLIPFETPSYGFFMEF 132
Query: 589 LLP 597 LLP Sbjct: 133 LLP 135
>tr|A4RVI9|A4RVI9_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_37056 PE=4 SV=1 Length = 415
Score = 67.4 bits (163), Expect = 6e-10 Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 1/64 (1%) Frame = +1
Query: 415 GMWSVLLCIAAFGIWSEKATHWGSVLSGA-LVSTLVGLAASNMGLIATDAPAYSIVNQYL 591 G+W+ +L AFG+W+EK WG+ GA LVSTL LA +N G++ TDAP Y ++N +L Sbjct: 54 GVWTAVLACGAFGLWAEKRP-WGANAGGAPLVSTLAALALANAGIMPTDAPTYGMINGFL 112
Query: 592 LPLS 603 LPL+ Sbjct: 113 LPLA 116
>tr|Q5VS60|Q5VS60_ORYSJ Os06g0107100 protein OS=Oryza sativa subsp. japonica GN=P0644B06.44-2 PE=4 SV=1 Length = 395
Score = 58.2 bits (139), Expect = 4e-07 Identities = 27/53 (50%), Positives = 35/53 (66%), Gaps = 8/53 (15%) Frame = +1
Query: 409 HWGMWSVLLCIAAFGIWSEKATHWGSVLSGALVST--------LVGLAASNMG 543 HWG W+ LL AAFG WSE++T WG+ LSG+LVST L+G A+ +G Sbjct: 70 HWGNWAFLLSAAAFGTWSEESTSWGAALSGSLVSTTGDLLKAFLIGSVATTIG 122
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