DK955990 |
Clone id |
TST39A01NGRL0024_J03 |
Library |
TST39 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J03. 5' end sequence. |
Accession |
DK955990 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GGAAGAGATTCGCAGAACGAGAGCAGGGCCGCGTCGCCTCGTGAACTTCATCATCGTTAC CAGTTTCGTCAAGGAGCAGGCCTCCTCGCAGAGAGGTAGCCTCACAAAGAGAGATCCAAC TCAAACGAGGTTTATCCGAACATATTCTGCAGGACCCCACAATTCTCAAGCATGGTGTCT CTCAGCAGAATCAGGCAGCTGGATGCATTCCCGAAGGTCAATGAGGACTTCTACCGCAGA TCCCTGTCCGGCGGTGTCATCACCCTTGTCGCCGCGGTTGTCATGCTGCTTCTCTTCATC ACTGAGCTCAAAATTTATCTTCACCCTGTCACAACTACGGAGCTCACGGTGGATACTTCC AGAGGTGAAACACTGCAAATTTATCTAGATGTAACATTTCCATCTCTTGCTTGCTCCATC ATCAGTCTAGATGCCATGGACATTAGCGGCGAGCAACATCTCGATGTGAAACATAATATC TATAAGAAAAGGCTGGATCCAACGGGAAAGGTGGTTGAACCACCTAAGCAGGAGAATCTT GGAGGTCCTCAGATAAAAAAGCCTTTACAAAGACCACGGCGGTCGCCTTGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q803I2 |
Definition |
sp|Q803I2|ERGI3_DANRE Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Danio rerio |
Align length |
115 |
Score (bit) |
120.0 |
E-value |
4.0e-27 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RLD2 |
Definition |
tr|A9RLD2|A9RLD2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
134 |
Score (bit) |
182.0 |
E-value |
1.0e-44 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK955990|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_J03, 5' (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RLD2|A9RLD2_PHYPA Predicted protein OS=Physcomitrella paten... 182 1e-44 tr|A7NV05|A7NV05_VITVI Chromosome chr18 scaffold_1, whole genome... 182 1e-44 tr|A9SF56|A9SF56_PHYPA Predicted protein OS=Physcomitrella paten... 181 2e-44 tr|Q9LM16|Q9LM16_ARATH F16L1.7 protein (Putative uncharacterized... 181 3e-44 tr|Q2V4M1|Q2V4M1_ARATH Uncharacterized protein At1g22200.2 OS=Ar... 181 3e-44 tr|Q7XRF0|Q7XRF0_ORYSJ Os04g0455900 protein OS=Oryza sativa subs... 180 6e-44 tr|Q01JQ8|Q01JQ8_ORYSA H0523F07.5 protein OS=Oryza sativa GN=H05... 180 6e-44 tr|B8AUP2|B8AUP2_ORYSI Putative uncharacterized protein OS=Oryza... 180 6e-44 tr|A9S017|A9S017_PHYPA Predicted protein OS=Physcomitrella paten... 179 8e-44 tr|A9S7E6|A9S7E6_PHYPA Predicted protein OS=Physcomitrella paten... 175 2e-42 tr|Q9C8W1|Q9C8W1_ARATH Putative uncharacterized protein T22A15.3... 175 2e-42 tr|B4FKC8|B4FKC8_MAIZE Putative uncharacterized protein OS=Zea m... 175 2e-42 tr|A7QGP1|A7QGP1_VITVI Chromosome chr12 scaffold_93, whole genom... 175 2e-42 tr|B7FHL8|B7FHL8_MEDTR Putative uncharacterized protein OS=Medic... 169 8e-41 tr|Q6F325|Q6F325_ORYSJ Os05g0490200 protein OS=Oryza sativa subs... 162 1e-38 tr|B8AZH8|B8AZH8_ORYSI Putative uncharacterized protein OS=Oryza... 162 1e-38 tr|A3B5C6|A3B5C6_ORYSJ Putative uncharacterized protein OS=Oryza... 162 1e-38 tr|B4FFY7|B4FFY7_MAIZE Putative uncharacterized protein OS=Zea m... 162 2e-38 tr|B4FA81|B4FA81_MAIZE Putative uncharacterized protein OS=Zea m... 162 2e-38 tr|B4FPI8|B4FPI8_MAIZE Putative uncharacterized protein OS=Zea m... 161 3e-38 tr|Q10M68|Q10M68_ORYSJ Serologically defined breast cancer antig... 160 5e-38 tr|B8ANE4|B8ANE4_ORYSI Putative uncharacterized protein OS=Oryza... 160 5e-38 tr|B4FU96|B4FU96_MAIZE Putative uncharacterized protein OS=Zea m... 160 7e-38 tr|Q9SKW6|Q9SKW6_ARATH F5J5.4 OS=Arabidopsis thaliana PE=4 SV=1 136 1e-30 tr|A3AUF5|A3AUF5_ORYSJ Putative uncharacterized protein OS=Oryza... 134 3e-30 tr|B3S2A1|B3S2A1_TRIAD Putative uncharacterized protein OS=Trich... 132 2e-29 tr|Q7PZY5|Q7PZY5_ANOGA AGAP012144-PA OS=Anopheles gambiae GN=AGA... 126 1e-27 tr|B6KWE5|B6KWE5_BRAFL Putative uncharacterized protein OS=Branc... 124 3e-27 tr|Q4SUD3|Q4SUD3_TETNG Chromosome undetermined SCAF13964, whole ... 121 3e-26 tr|A8HTR9|A8HTR9_CHLRE Predicted protein OS=Chlamydomonas reinha... 120 4e-26
>tr|A9RLD2|A9RLD2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_203607 PE=4 SV=1 Length = 385
Score = 182 bits (463), Expect = 1e-44 Identities = 85/134 (63%), Positives = 110/134 (82%) Frame = +1
Query: 172 MVSLSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTV 351 M ++++QLDA PK++EDFY R+LSGGVITLV+++ M LLF+TE +IYL T +L V Sbjct: 1 MAIFNKLKQLDAHPKISEDFYSRTLSGGVITLVSSIFMFLLFVTEFRIYLSAQTQNQLVV 60
Query: 352 DTSRGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQ 531 DTSRGETLQI LD+TFP+LACS++SLDAMDISGE HLDV+HNIYKKRLD GK V+ PK Sbjct: 61 DTSRGETLQINLDITFPALACSVVSLDAMDISGELHLDVRHNIYKKRLDVHGKAVDAPKP 120
Query: 532 ENLGGPQIKKPLQR 573 + + P+++KPLQ+ Sbjct: 121 DAINAPKVQKPLQK 134
>tr|A7NV05|A7NV05_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00015252001 PE=4 SV=1 Length = 386
Score = 182 bits (462), Expect = 1e-44 Identities = 86/131 (65%), Positives = 113/131 (86%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 ++++R LDA+PK+NEDFY R+LSGGVITL +++ MLLLFI+EL++YLH VT T+L VDTS Sbjct: 5 INKLRNLDAYPKINEDFYSRTLSGGVITLASSIFMLLLFISELRLYLHAVTETKLVVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGETL+I DVTFP+L CSI+SLDAMDISGEQHLDV+H+I KKR+D G V+E +Q+ + Sbjct: 65 RGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVRHDIIKKRIDAHGSVIE-ARQDGI 123
Query: 541 GGPQIKKPLQR 573 G P+I+KPLQ+ Sbjct: 124 GSPKIEKPLQK 134
>tr|A9SF56|A9SF56_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_184291 PE=4 SV=1 Length = 385
Score = 181 bits (460), Expect = 2e-44 Identities = 84/134 (62%), Positives = 111/134 (82%) Frame = +1
Query: 172 MVSLSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTV 351 M ++++QLDA+PK++EDFY R+LSGGVITLV+ V M +LF+TE+ +YL T +L V Sbjct: 1 MAVFNKLKQLDAYPKISEDFYSRTLSGGVITLVSTVFMFVLFVTEISLYLSAQTQNQLVV 60
Query: 352 DTSRGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQ 531 DTSRGETLQI LD+TFP+LACS++SLDAMDISGEQHL+V+HNI+KKRLD GKVV PK Sbjct: 61 DTSRGETLQINLDITFPALACSMVSLDAMDISGEQHLNVRHNIFKKRLDVHGKVVNAPKP 120
Query: 532 ENLGGPQIKKPLQR 573 + + P+++KPLQ+ Sbjct: 121 DAINAPKVQKPLQK 134
>tr|Q9LM16|Q9LM16_ARATH F16L1.7 protein (Putative uncharacterized protein At1g22200) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At1g22200 PE=2 SV=1 Length = 386
Score = 181 bits (459), Expect = 3e-44 Identities = 85/131 (64%), Positives = 114/131 (87%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 ++R+R LDA+PK+NEDFYRR+LSGGVITL +++VML+LF +EL++Y+HPVT T+L VDTS Sbjct: 5 MNRLRNLDAYPKINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTETQLRVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGE L+I DVTFP+L CSIISLD+MDISGE+HLDV+H+I K+RLD +G V+E KQ+ + Sbjct: 65 RGEKLRINFDVTFPALQCSIISLDSMDISGERHLDVRHDIIKRRLDSSGNVIE-AKQDGI 123
Query: 541 GGPQIKKPLQR 573 G +I+KPLQ+ Sbjct: 124 GHTKIEKPLQK 134
>tr|Q2V4M1|Q2V4M1_ARATH Uncharacterized protein At1g22200.2 OS=Arabidopsis thaliana GN=At1g22200 PE=4 SV=1 Length = 338
Score = 181 bits (459), Expect = 3e-44 Identities = 85/131 (64%), Positives = 114/131 (87%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 ++R+R LDA+PK+NEDFYRR+LSGGVITL +++VML+LF +EL++Y+HPVT T+L VDTS Sbjct: 5 MNRLRNLDAYPKINEDFYRRTLSGGVITLASSIVMLILFFSELQLYIHPVTETQLRVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGE L+I DVTFP+L CSIISLD+MDISGE+HLDV+H+I K+RLD +G V+E KQ+ + Sbjct: 65 RGEKLRINFDVTFPALQCSIISLDSMDISGERHLDVRHDIIKRRLDSSGNVIE-AKQDGI 123
Query: 541 GGPQIKKPLQR 573 G +I+KPLQ+ Sbjct: 124 GHTKIEKPLQK 134
>tr|Q7XRF0|Q7XRF0_ORYSJ Os04g0455900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0006M15.17 PE=4 SV=2 Length = 386
Score = 180 bits (456), Expect = 6e-44 Identities = 87/131 (66%), Positives = 113/131 (86%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 LS++R LDA+PKVNEDFY R+LSGG+ITL ++VVMLLLF++EL++YLH VT T L VDTS Sbjct: 5 LSKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLRVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGETL+I DVTFP+L CSIISLDAMDISG++HLDVKH+I+K+R+D G V+ KQ+ + Sbjct: 65 RGETLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDVHGNVI-ATKQDAV 123
Query: 541 GGPQIKKPLQR 573 GG ++++PLQR Sbjct: 124 GGMKVEQPLQR 134
>tr|Q01JQ8|Q01JQ8_ORYSA H0523F07.5 protein OS=Oryza sativa GN=H0523F07.5 PE=4 SV=1 Length = 386
Score = 180 bits (456), Expect = 6e-44 Identities = 87/131 (66%), Positives = 113/131 (86%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 LS++R LDA+PKVNEDFY R+LSGG+ITL ++VVMLLLF++EL++YLH VT T L VDTS Sbjct: 5 LSKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLRVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGETL+I DVTFP+L CSIISLDAMDISG++HLDVKH+I+K+R+D G V+ KQ+ + Sbjct: 65 RGETLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDVHGNVI-ATKQDAV 123
Query: 541 GGPQIKKPLQR 573 GG ++++PLQR Sbjct: 124 GGMKVEQPLQR 134
>tr|B8AUP2|B8AUP2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_16129 PE=4 SV=1 Length = 386
Score = 180 bits (456), Expect = 6e-44 Identities = 87/131 (66%), Positives = 113/131 (86%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 LS++R LDA+PKVNEDFY R+LSGG+ITL ++VVMLLLF++EL++YLH VT T L VDTS Sbjct: 5 LSKLRSLDAYPKVNEDFYSRTLSGGIITLASSVVMLLLFVSELRLYLHAVTETTLRVDTS 64
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RGETL+I DVTFP+L CSIISLDAMDISG++HLDVKH+I+K+R+D G V+ KQ+ + Sbjct: 65 RGETLRINFDVTFPALQCSIISLDAMDISGQEHLDVKHDIFKQRIDVHGNVI-ATKQDAV 123
Query: 541 GGPQIKKPLQR 573 GG ++++PLQR Sbjct: 124 GGMKVEQPLQR 134
>tr|A9S017|A9S017_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_122110 PE=4 SV=1 Length = 382
Score = 179 bits (455), Expect = 8e-44 Identities = 81/131 (61%), Positives = 108/131 (82%) Frame = +1
Query: 181 LSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTVDTS 360 + +++ LDA+PK+NEDFY R+LSGG+IT+++A M+LLF +ELK+YL +L VDT Sbjct: 2 IQKLKSLDAYPKINEDFYSRTLSGGIITIISATFMVLLFFSELKLYLAAQVANDLVVDTE 61
Query: 361 RGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQENL 540 RG T+QI LDVTFP+LACS++SLDAMDISGE HLDVKHNI+KKRLD GKV+EP +QE++ Sbjct: 62 RGGTIQINLDVTFPALACSVVSLDAMDISGEAHLDVKHNIFKKRLDVNGKVIEPARQESI 121
Query: 541 GGPQIKKPLQR 573 P++ KPLQ+ Sbjct: 122 NQPKLDKPLQK 132
>tr|A9S7E6|A9S7E6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_57065 PE=4 SV=1 Length = 380
Score = 175 bits (444), Expect = 2e-42 Identities = 81/134 (60%), Positives = 110/134 (82%) Frame = +1
Query: 172 MVSLSRIRQLDAFPKVNEDFYRRSLSGGVITLVAAVVMLLLFITELKIYLHPVTTTELTV 351 M ++++ LDA+PK++EDFY R+LSGG+ITLV++V M LLFITE +IYL T +L V Sbjct: 1 MSFFNKLKHLDAYPKISEDFYSRTLSGGLITLVSSVFMTLLFITEFRIYLSAQTQNQLVV 60
Query: 352 DTSRGETLQIYLDVTFPSLACSIISLDAMDISGEQHLDVKHNIYKKRLDPTGKVVEPPKQ 531 DTSRGETLQI LD+TF +LACS++SLDAMDISGEQHL+V+HNI+KKRLD GK ++ PK Sbjct: 61 DTSRGETLQINLDITFSALACSVVSLDAMDISGEQHLNVRHNIFKKRLDVHGKAIDAPKP 120
Query: 532 ENLGGPQIKKPLQR 573 + + P++++PLQ+ Sbjct: 121 DAINAPKVQRPLQK 134
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