DK955991
Clone id TST39A01NGRL0024_J04
Library
Length 589
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J04. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
TTCGCGTGTGTAGGCCACAGAGGCACGCCATCGCCGCGAGCTGGTTTGGGGTCTCTGACG
ATGGCTTGCAGCAGCGGCAACAGAGCCATGCAGGCGCCCTCTTCTCTCTCCTCCTGCGAG
GCCTCCTCTCTGCGTGGCCTCTCTTTGGCTCCTGCCTTGAGGCCCCGAGCTCGATCGCCG
CCTTCTTCCTCTGCTCCTCATCACACTCTGAAGGTCATGGCTATGGCGCCCAAAAACAAG
GTGAATGCATATGATTCTGATTGGAACAAAACATGGTTCGGAGCCGGGATGTTTGCCGAA
AATACAGAGGCTGCACCTATGAACATTGTGCAGAAGCTGGAGAAGAAGAAGCTTCTTAGC
CAAGTAGAGAAGGCAGGGCTTCTTTCAAAGGCAGAGAGTGCTGGCCTCACTCTCTCCTCA
ATAGAGAAGATGGGTTTGTTGTCGAAGGCCGAGGATCTTGGTCTGTTGAGCTTTGCAGAG
AGCTTCGCAACATCATCACCTGCACTTCTCGCATCTCTGTCATTGCCTCTCATTGTCCTA
TCTGTTGTGACATTGGTTGTAGTACCCGATGATAGCACGGCTCTTGTTG
■■Homology search results ■■ -
sp_hit_id O74324
Definition sp|O74324|YH04_SCHPO Uncharacterized protein C1685.04 OS=Schizosaccharomyces pombe
Align length 54
Score (bit) 32.0
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955991|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J04, 5'
(589 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O74324|YH04_SCHPO Uncharacterized protein C1685.04 OS=Schizos... 32 2.4
sp|O66976|HISX_AQUAE Histidinol dehydrogenase OS=Aquifex aeolicu... 32 3.1
sp|Q9IBG7|CRIM2_XENLA Cysteine-rich motor neuron 2 protein OS=Xe... 31 4.0
sp|A1T041|RL9_PSYIN 50S ribosomal protein L9 OS=Psychromonas ing... 31 5.3
sp|Q66GS9|CP135_HUMAN Centrosomal protein of 135 kDa OS=Homo sap... 31 5.3
sp|Q9LS42|CASP_ARATH Protein CASP OS=Arabidopsis thaliana GN=CAS... 31 5.3

>sp|O74324|YH04_SCHPO Uncharacterized protein C1685.04
OS=Schizosaccharomyces pombe GN=SPBC1685.04 PE=2 SV=1
Length = 325

Score = 32.0 bits (71), Expect = 2.4
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +1

Query: 301 NTEAAPMNIVQKLEKKKLLSQVEKAGLLSKAESAGLTLSSIEK-MGLLSKAEDL 459
NT + LEKKK LS ++ L + A +SS+EK M +L K EDL
Sbjct: 167 NTLVKRLQTYDNLEKKKALSMEDRLLTLQEQYDAHANVSSLEKRMEVLKKREDL 220


>sp|O66976|HISX_AQUAE Histidinol dehydrogenase OS=Aquifex aeolicus
GN=hisD PE=3 SV=1
Length = 426

Score = 31.6 bits (70), Expect = 3.1
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1

Query: 217 MAMAPKNKVNAYDSDWNKTWFGAGMF--AENTEAAPMNIVQKLEK--KKLLSQVEKAGLL 384
M P + D N TW A M AE+ E A ++ E+ K+ +VE+ LL
Sbjct: 228 MIAGPSEVLVIADERANPTWVAADMLSQAEHDELAASILLTPSEELANKVKEEVER--LL 285

Query: 385 SKAESAGLTLSSIEKMGLLSKAEDL 459
S+ E + S+EK G + +DL
Sbjct: 286 SQLERKEIAQKSLEKFGTIFLVKDL 310


>sp|Q9IBG7|CRIM2_XENLA Cysteine-rich motor neuron 2 protein OS=Xenopus
laevis GN=crim2 PE=2 SV=1
Length = 2327

Score = 31.2 bits (69), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3

Query: 465 VELCRELRNIITCTSRISVIASHCPICCD 551
V C +L+ I +CT++I++ CP+C D
Sbjct: 1704 VTTCSKLQCITSCTNQITIPGECCPVCAD 1732


>sp|A1T041|RL9_PSYIN 50S ribosomal protein L9 OS=Psychromonas
ingrahamii (strain 37) GN=rplI PE=3 SV=1
Length = 150

Score = 30.8 bits (68), Expect = 5.3
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1

Query: 268 KTWFGAGMFAENTEAAPMNI--VQKLEKKKLLSQVEKAGLLSKAESAGLTLSSIEKMGLL 441
K+ + +A P N ++ E +++ + ++A L+ AE G L+++E + +
Sbjct: 22 KSGYARNFLFPQQKAVPANKANLEAFETRRVELEAKQAANLAAAEKRGAALAALEAVVIA 81

Query: 442 SKAEDLGLL 468
SKA D+G L
Sbjct: 82 SKAGDVGKL 90


>sp|Q66GS9|CP135_HUMAN Centrosomal protein of 135 kDa OS=Homo
sapiens GN=CEP135 PE=1 SV=1
Length = 1140

Score = 30.8 bits (68), Expect = 5.3
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1

Query: 298 ENTEA-APMNIVQKLEKKKLLSQVEKAGLLSKAESAGLTLSSIEKMGLLSKAE 453
E+T+ AP NIV +EK+K L+ + ++++ E+ L IE++ L K+E
Sbjct: 553 ESTQTTAPHNIVSLMEKEKELALSDLRRIMAEKEALREKLEHIEEVSLFGKSE 605


>sp|Q9LS42|CASP_ARATH Protein CASP OS=Arabidopsis thaliana GN=CASP
PE=1 SV=2
Length = 689

Score = 30.8 bits (68), Expect = 5.3
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1

Query: 208 LKVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQV-EKAGLL 384
+K++ N + A DW+ G M + N + E +L Q+ EKA LL
Sbjct: 380 VKILQAVGYNSIEA--EDWDAATTGEEMSKMESLLLDKNRKMEHEVTQLKVQLSEKASLL 437

Query: 385 SKAESAG--LTLSSIEKMGLLSKAED 456
KAE+ G LT E+ L+ K ED
Sbjct: 438 EKAEAKGEELTAKVNEQQRLIQKLED 463


tr_hit_id A9TMU4
Definition tr|A9TMU4|A9TMU4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 88
Score (bit) 143.0
E-value 6.0e-33
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955991|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J04, 5'
(589 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TMU4|A9TMU4_PHYPA Predicted protein OS=Physcomitrella paten... 143 6e-33
tr|A9TJ04|A9TJ04_PHYPA Predicted protein OS=Physcomitrella paten... 140 4e-32
tr|A9S8Z7|A9S8Z7_PHYPA Predicted protein (Fragment) OS=Physcomit... 131 2e-29
tr|B6TFL9|B6TFL9_MAIZE Putative uncharacterized protein OS=Zea m... 128 3e-28
tr|A9NZ32|A9NZ32_PICSI Putative uncharacterized protein OS=Picea... 127 4e-28
tr|B4FRC0|B4FRC0_MAIZE Putative uncharacterized protein OS=Zea m... 123 7e-27
tr|Q0JLN9|Q0JLN9_ORYSJ cDNA clone:J023103B06, full insert sequen... 122 2e-26
tr|A2WRV9|A2WRV9_ORYSI Putative uncharacterized protein OS=Oryza... 122 2e-26
tr|B7FFF0|B7FFF0_MEDTR Putative uncharacterized protein OS=Medic... 121 3e-26
tr|A5C347|A5C347_VITVI Putative uncharacterized protein (Chromos... 120 7e-26
tr|A9PJV1|A9PJV1_POPJC Putative uncharacterized protein OS=Popul... 118 3e-25
tr|Q9SSF7|Q9SSF7_ARATH F25A4.30 protein OS=Arabidopsis thaliana ... 117 5e-25
tr|Q94F10|Q94F10_ARATH Putative uncharacterized protein (Putativ... 117 5e-25
tr|B7FKD0|B7FKD0_MEDTR Putative uncharacterized protein OS=Medic... 115 2e-24
tr|A9PGF4|A9PGF4_POPTR Putative uncharacterized protein OS=Popul... 67 1e-09
tr|A3CIP9|A3CIP9_ORYSJ Putative uncharacterized protein OS=Oryza... 65 2e-09
tr|A7QI04|A7QI04_VITVI Chromosome chr17 scaffold_101, whole geno... 65 3e-09
tr|Q2QN86|Q2QN86_ORYSJ Os12g0575000 protein OS=Oryza sativa subs... 65 4e-09
tr|A9NMI1|A9NMI1_PICSI Putative uncharacterized protein OS=Picea... 65 4e-09
tr|B4FV96|B4FV96_MAIZE Putative uncharacterized protein OS=Zea m... 64 6e-09
tr|B8BMN2|B8BMN2_ORYSI Putative uncharacterized protein OS=Oryza... 64 8e-09
tr|Q9SD79|Q9SD79_ARATH Putative uncharacterized protein F13G24.2... 61 5e-08
tr|Q8VYV1|Q8VYV1_ARATH AT5g08050/F13G24_250 OS=Arabidopsis thali... 61 5e-08
tr|A9S2G0|A9S2G0_PHYPA Predicted protein (Fragment) OS=Physcomit... 59 2e-07
tr|Q2QN87|Q2QN87_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 57 8e-07
tr|Q2R4U2|Q2R4U2_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002
tr|A2ZE10|A2ZE10_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002
tr|B7G128|B7G128_PHATR Predicted protein OS=Phaeodactylum tricor... 44 0.009
tr|B8LBT9|B8LBT9_THAPS Predicted protein OS=Thalassiosira pseudo... 43 0.015
tr|A6R060|A6R060_AJECN Glycyl-tRNA synthetase 1 OS=Ajellomyces c... 35 0.48

>tr|A9TMU4|A9TMU4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_147884 PE=4 SV=1
Length = 152

Score = 143 bits (361), Expect = 6e-33
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +1

Query: 223 MAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSKAESA 402
MAPK KVNAYD W+K WFGAG+FAENTE P+NIV+KLEKKKLLSQVEKAGLLSKAES
Sbjct: 1 MAPKKKVNAYDEGWSKQWFGAGIFAENTETEPVNIVKKLEKKKLLSQVEKAGLLSKAESL 60

Query: 403 GLTLSSIEKMGLLSKAEDLGLLSFAESF 486
G++LS IEK+GLLSKAEDLGLLS AE F
Sbjct: 61 GVSLSQIEKLGLLSKAEDLGLLSLAEKF 88


>tr|A9TJ04|A9TJ04_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_146224 PE=4 SV=1
Length = 165

Score = 140 bits (354), Expect = 4e-32
Identities = 70/92 (76%), Positives = 81/92 (88%)
Frame = +1

Query: 211 KVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSK 390
+V AMAPK KVNAYD W+K WFGAG+FAENTE ++IV+KLEKKKLLSQVEKAGLLSK
Sbjct: 10 QVRAMAPKKKVNAYDDAWSKQWFGAGLFAENTETESVDIVKKLEKKKLLSQVEKAGLLSK 69

Query: 391 AESAGLTLSSIEKMGLLSKAEDLGLLSFAESF 486
AES G++LS IEK+GLLSKAEDLGLL+ AE+F
Sbjct: 70 AESLGVSLSQIEKLGLLSKAEDLGLLTLAENF 101


>tr|A9S8Z7|A9S8Z7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_48633 PE=4 SV=1
Length = 117

Score = 131 bits (330), Expect = 2e-29
Identities = 68/92 (73%), Positives = 79/92 (85%)
Frame = +1

Query: 211 KVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSK 390
+V AMAPK KVNA+D W+K WFGAG+FAENTE ++IV+KLEKK LLSQVEKAGLLSK
Sbjct: 5 QVRAMAPKKKVNAHDDAWSKQWFGAGVFAENTETESVDIVKKLEKK-LLSQVEKAGLLSK 63

Query: 391 AESAGLTLSSIEKMGLLSKAEDLGLLSFAESF 486
AES G++LS IEK+GLLSKAEDLGLL+ AE F
Sbjct: 64 AESLGVSLSQIEKLGLLSKAEDLGLLTLAEKF 95


>tr|B6TFL9|B6TFL9_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 189

Score = 128 bits (321), Expect = 3e-28
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = +1

Query: 211 KVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSK 390
KV AMAPK KVN YD W+K WFGAG+FAE +E +++ +KLE++K+LS VEKAGLLSK
Sbjct: 33 KVTAMAPKKKVNRYDESWSKQWFGAGIFAEGSEEVSVDVFKKLERRKVLSTVEKAGLLSK 92

Query: 391 AESAGLTLSSIEKMGLLSKAEDLGLLSFAES 483
AE GLTLSS+EK+GLLSKAEDLGLLS E+
Sbjct: 93 AEELGLTLSSLEKLGLLSKAEDLGLLSLVET 123


>tr|A9NZ32|A9NZ32_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 209

Score = 127 bits (320), Expect = 4e-28
Identities = 63/91 (69%), Positives = 75/91 (82%)
Frame = +1

Query: 208 LKVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLS 387
L ++AMAPK KVN YD +W K WFGAG+F E E ++I++KLEK+K+LS VEKAGLLS
Sbjct: 54 LLILAMAPKKKVNKYDDNWKKQWFGAGIFLEGDEDVDVDIIKKLEKRKVLSGVEKAGLLS 113

Query: 388 KAESAGLTLSSIEKMGLLSKAEDLGLLSFAE 480
KA+ GL+LSSIEKMGLLSKAEDLGLLS AE
Sbjct: 114 KADELGLSLSSIEKMGLLSKAEDLGLLSLAE 144


>tr|B4FRC0|B4FRC0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 153

Score = 123 bits (309), Expect = 7e-27
Identities = 59/87 (67%), Positives = 72/87 (82%)
Frame = +1

Query: 223 MAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSKAESA 402
MAPK KVN YD W+K WFGAG+FAE +E +++ +KLE++K+LS VEKAGLLSKAE
Sbjct: 1 MAPKKKVNRYDESWSKQWFGAGIFAEGSEEVSVDVFKKLERRKVLSTVEKAGLLSKAEEL 60

Query: 403 GLTLSSIEKMGLLSKAEDLGLLSFAES 483
GLTLSS+EK+GLLSKAEDLGLLS E+
Sbjct: 61 GLTLSSLEKLGLLSKAEDLGLLSLVET 87


>tr|Q0JLN9|Q0JLN9_ORYSJ cDNA clone:J023103B06, full insert sequence
OS=Oryza sativa subsp. japonica GN=Os01g0585300 PE=2
SV=1
Length = 187

Score = 122 bits (306), Expect = 2e-26
Identities = 58/91 (63%), Positives = 75/91 (82%)
Frame = +1

Query: 211 KVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSK 390
KV AMAP+ KVN YD W+K WFGAG+FAE +E +++ +KLE++K+LS VEKAGLLS+
Sbjct: 31 KVTAMAPQKKVNRYDEKWSKQWFGAGIFAEGSEEVEVDVFKKLERRKVLSTVEKAGLLSR 90

Query: 391 AESAGLTLSSIEKMGLLSKAEDLGLLSFAES 483
AE G+TLSS+E++GLLSKAEDLGLLS E+
Sbjct: 91 AEELGVTLSSLEELGLLSKAEDLGLLSLVEA 121


>tr|A2WRV9|A2WRV9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02598 PE=4 SV=1
Length = 187

Score = 122 bits (306), Expect = 2e-26
Identities = 58/91 (63%), Positives = 75/91 (82%)
Frame = +1

Query: 211 KVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSK 390
KV AMAP+ KVN YD W+K WFGAG+FAE +E +++ +KLE++K+LS VEKAGLLS+
Sbjct: 31 KVTAMAPQKKVNRYDEKWSKQWFGAGIFAEGSEEVEVDVFKKLERRKVLSTVEKAGLLSR 90

Query: 391 AESAGLTLSSIEKMGLLSKAEDLGLLSFAES 483
AE G+TLSS+E++GLLSKAEDLGLLS E+
Sbjct: 91 AEELGVTLSSLEELGLLSKAEDLGLLSLVEA 121


>tr|B7FFF0|B7FFF0_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=2 SV=1
Length = 193

Score = 121 bits (304), Expect = 3e-26
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = +1

Query: 214 VMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLSKA 393
V AMAPKNKVN Y+ +W K WFGAG+F E +E +++ +KLEK+K+LS VEKAGLLSKA
Sbjct: 38 VFAMAPKNKVNKYNDNWKKQWFGAGIFYEGSEEVEVDVFKKLEKRKVLSNVEKAGLLSKA 97

Query: 394 ESAGLTLSSIEKMGLLSKAEDLGLLSFAE 480
E G+TLSSIEK+GL SKAE+LGLLS E
Sbjct: 98 EEFGVTLSSIEKLGLFSKAEELGLLSLLE 126


>tr|A5C347|A5C347_VITVI Putative uncharacterized protein (Chromosome
chr17 scaffold_101, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00000090001 PE=4 SV=1
Length = 193

Score = 120 bits (300), Expect = 7e-26
Identities = 57/91 (62%), Positives = 71/91 (78%)
Frame = +1

Query: 208 LKVMAMAPKNKVNAYDSDWNKTWFGAGMFAENTEAAPMNIVQKLEKKKLLSQVEKAGLLS 387
L+++AMA K KVN YD +W K WFGAG+F E +E +++ + LEKKK+LS VEK+GLLS
Sbjct: 36 LRILAMASKKKVNRYDENWKKEWFGAGIFVEGSEEVEVDVFKNLEKKKVLSNVEKSGLLS 95

Query: 388 KAESAGLTLSSIEKMGLLSKAEDLGLLSFAE 480
KAE G TLSSIEK+G+ SKAEDLGLLS E
Sbjct: 96 KAEELGFTLSSIEKLGVFSKAEDLGLLSLLE 126