DK955998
Clone id TST39A01NGRL0024_J11
Library
Length 536
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J11. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence
TTTGAGTGAGGACTTTGAGGGGCCAAACCAGGCTACCTCATCGGCCATGGCCGCTCTCTC
TCTGCGTCAATCAAACCCTAATTGGAGGAGTTTCAACGCAGCTTCGAGGGAGTGACCTGT
GCGTGGGAGCCTTGATGAGGTGAAGTGAAGGCTAATTGCCGCTACGGCAGGAAGCTCAGA
ACGCTTTGTAGCATCTCAAATTGACAGTTTGCGGATTATCATCAGGAGATACAGATGGAG
CCAGCTTCAGTTTCCTCCTACAGTGGTAATGGAAACGGCTTCTACAAAGCCTTTGACATG
TTGTCAAACCAAGCAAGGCTCGTGAATCGTAAATCTGTGCACAAAGCCTCAGCAGTCGCA
GCTGCTTGGGATGACTTTGCCGATGGTAGTGAGACCATCATGTCGCATGGAAGTAGTGGA
GTTATCACTCCATCCATGGAAGCTGAATTTGCGGACGTCGAGTTTGCAGATGCTGAAAGC
CATTCATCCTCTCTGTCTTCCCTCGACAGCAAACCCAACTCAGCTTCTTTTTGAAG
■■Homology search results ■■ -
sp_hit_id Q9W0Y8
Definition sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila melanogaster
Align length 30
Score (bit) 32.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955998|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J11, 5'
(536 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila m... 32 1.9

>sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila
melanogaster GN=NaCP60E PE=2 SV=5
Length = 2821

Score = 32.0 bits (71), Expect = 1.9
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +1

Query: 223 QEIQMEPASVSSYSGNGNGFYKAFDMLSNQ 312
+E + E S S SGNGNGF DMLS Q
Sbjct: 2699 EEYKEEDESSPSVSGNGNGFGVGLDMLSKQ 2728


tr_hit_id A7KH75
Definition tr|A7KH75|A7KH75_MEDTR Nodule-specific cysteine-rich peptide 57 OS=Medicago truncatula
Align length 27
Score (bit) 33.1
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK955998|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J11, 5'
(536 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7KH75|A7KH75_MEDTR Nodule-specific cysteine-rich peptide 57 ... 33 9.3
tr|Q5BCI4|Q5BCI4_EMENI Putative uncharacterized protein OS=Emeri... 33 9.3

>tr|A7KH75|A7KH75_MEDTR Nodule-specific cysteine-rich peptide 57
OS=Medicago truncatula PE=4 SV=1
Length = 66

Score = 33.1 bits (74), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2

Query: 271 HYHCRRKLKLAPSVSPDDNPQTVNLRC 191
HY CRRK+K+ + P + P +N C
Sbjct: 32 HYDCRRKVKIVGCIFPQEKPMCINSMC 58


>tr|Q5BCI4|Q5BCI4_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN1746.2 PE=4 SV=1
Length = 1820

Score = 33.1 bits (74), Expect = 9.3
Identities = 33/94 (35%), Positives = 38/94 (40%), Gaps = 4/94 (4%)
Frame = +2

Query: 245 LQFPPTVVMETASTKPLTCCQT-KQGS*IVNLCTKPQQSQLLGMTLPMVVRPSCRM--EV 415
L F PT TA T CC+ S V P +L P VV C +
Sbjct: 367 LDFFPTSTQRTAVTTAANCCRNLPHDSFPVVRDVMPTLLNVLSSNDPKVVEQGCLCVSRI 426

Query: 416 VELSLH-PWKLNLRTSSLQMLKAIHPLCLPSTAN 514
VE H P KL S +MLKA+ L LP T N
Sbjct: 427 VESFRHKPEKLE-ELISPEMLKAVLRLLLPGTTN 459