DK956002 |
Clone id |
TST39A01NGRL0024_J15 |
Library |
TST39 |
Length |
589 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J15. 5' end sequence. |
Accession |
DK956002 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL449Contig1 |
Sequence |
CTCGAGCTCAGTTTTCATTCTCCTTCGCTGCTCGTTCGAAGTTCTGTGGCTATGGCGTAT CCCAAGGCTCGCGGAGAAGACCCTCTTAACTATGAAGAGTACGATCCCACCCCTTTCTCA GGCGGCTACGATCAAGTTGCCCTCTACGGGCGCCCCAAGTCACCCTCCCAGGAAACCTGT TACCCTATTTCTGAGATCTCTCATCATGAATCTGGCAGCTATGGTGGTGGCTATGGGGGT AGCTATGGCGAAGACCACTCTAGTAAGCCCTCTCGCCCCGCTTACGGTGTAGATGAGGAG CGTCCCACCTACCAGGAAGAAAATCCCTCCACCGGATCCGATGACTTCACTTCTTCTGGC TATGGAAGACCTAGCTATGGATCTGGTTATGAACGGCCTAAGCCAAGTTCTTTCGAAGAG GAAGGTGGCTATGGGGGATTTAAGCCCAGTTCTTATGAAGAGGAGGGGGGCTATGGAGGT CACAAGCCCAGCTCTCACGAAGAAGAAGGGGGAGGAGGGTATGGATCTGGGTATAGCCGG CCAAAGCCTTCTTATGGAGAAGAAGAGGAAGGAGGGTTTGCATCTGGGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FKA5 |
Definition |
sp|Q9FKA5|Y5957_ARATH Uncharacterized protein At5g39570 OS=Arabidopsis thaliana |
Align length |
46 |
Score (bit) |
58.5 |
E-value |
2.0e-08 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PMZ8 |
Definition |
tr|A7PMZ8|A7PMZ8_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
41 |
Score (bit) |
59.7 |
E-value |
1.0e-07 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956002|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_J15, 5' (589 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PMZ8|A7PMZ8_VITVI Chromosome chr14 scaffold_21, whole genom... 60 1e-07 tr|B6TUF7|B6TUF7_MAIZE Putative uncharacterized protein OS=Zea m... 59 3e-07 tr|Q5Y2E6|Q5Y2E6_PINHA Putative uncharacterized protein OS=Pinus... 58 5e-07 tr|Q9LPZ0|Q9LPZ0_ARATH T23J18.11 (At1g11440) (Putative serine/th... 57 6e-07 tr|Q7XXQ8|Q7XXQ8_ORYSJ Os06g0232000 protein OS=Oryza sativa subs... 57 1e-06 tr|A2YAZ8|A2YAZ8_ORYSI Putative uncharacterized protein OS=Oryza... 57 1e-06 tr|B4G1E6|B4G1E6_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|B4F957|B4F957_MAIZE Putative uncharacterized protein OS=Zea m... 56 1e-06 tr|B6T4Q5|B6T4Q5_MAIZE Pro-resilin OS=Zea mays PE=2 SV=1 55 3e-06 tr|A7R6C3|A7R6C3_VITVI Chromosome undetermined scaffold_1227, wh... 55 3e-06 tr|A5BG40|A5BG40_VITVI Putative uncharacterized protein OS=Vitis... 55 3e-06 tr|Q9LJV8|Q9LJV8_ARATH Gb|AAF16629.1 OS=Arabidopsis thaliana GN=... 52 3e-05 tr|Q8L7V6|Q8L7V6_ARATH AT3g29075/MXE2_1 (Fragment) OS=Arabidopsi... 52 3e-05 tr|Q6NLC5|Q6NLC5_ARATH At3g29075 OS=Arabidopsis thaliana PE=2 SV=1 52 3e-05 tr|Q6Z4P3|Q6Z4P3_ORYSJ Os07g0682700 protein OS=Oryza sativa subs... 52 3e-05 tr|B8B639|B8B639_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|Q6XNP6|Q6XNP6_HEVBR Latex abundant protein 1 OS=Hevea brasili... 50 7e-05 tr|Q6Z2V1|Q6Z2V1_ORYSJ Glycine-rich protein-like OS=Oryza sativa... 49 3e-04 tr|A3ABA2|A3ABA2_ORYSJ Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|A2X9J1|A2X9J1_ORYSI Putative uncharacterized protein OS=Oryza... 49 3e-04 tr|A9TCZ4|A9TCZ4_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.099 tr|A9SVG4|A9SVG4_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.13 tr|A9SLE7|A9SLE7_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.13 tr|B4KWH3|B4KWH3_DROMO GI11433 OS=Drosophila mojavensis GN=GI114... 36 1.4 tr|A4ISC5|A4ISC5_GEOTN Superoxide dismutase [Cu-Zn] OS=Geobacill... 36 1.9 tr|B4BSD0|B4BSD0_9BACI Superoxide dismutase copper/zinc binding ... 36 1.9 tr|B7Y8N1|B7Y8N1_9BACI Superoxide dismutase copper/zinc binding ... 35 3.2 tr|B4QH25|B4QH25_DROSI GD25143 OS=Drosophila simulans GN=GD25143... 27 5.3 tr|B5U343|B5U343_SPEDA L-type voltage-dependent calcium channel ... 34 5.4 tr|B4L2L6|B4L2L6_DROMO GI15962 OS=Drosophila mojavensis GN=GI159... 34 5.4
>tr|A7PMZ8|A7PMZ8_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00021008001 PE=4 SV=1 Length = 383
Score = 59.7 bits (143), Expect = 1e-07 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%) Frame = +1
Query: 70 RGEDPLN-YEEYDPTPFSGGYDQVALYGRPKSPSQETCYPI 189 R ED + ++EYDPTP+ GGYD +YGRP PS+ETCYPI Sbjct: 5 RNEDVSDEFDEYDPTPYGGGYDITVIYGRPLEPSEETCYPI 45
>tr|B6TUF7|B6TUF7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 203
Score = 58.5 bits (140), Expect = 3e-07 Identities = 22/40 (55%), Positives = 30/40 (75%) Frame = +1
Query: 70 RGEDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYPI 189 R ++ +++EYDPTP+ GGYD +GRP PS+ETCYPI Sbjct: 10 RADEVADFDEYDPTPYGGGYDIALTFGRPLPPSEETCYPI 49
>tr|Q5Y2E6|Q5Y2E6_PINHA Putative uncharacterized protein OS=Pinus halepensis PE=2 SV=1 Length = 323
Score = 57.8 bits (138), Expect = 5e-07 Identities = 35/108 (32%), Positives = 47/108 (43%) Frame = +1
Query: 88 NYEEYDPTPFSGGYDQVALYGRPKSPSQETCYPIXXXXXXXXXXXXXXXXXXXXXXXXXK 267 ++++YDPTPF GGYDQ YG+ + PS+ETCYP Sbjct: 11 DFDDYDPTPFGGGYDQGVTYGKSRPPSEETCYP------PSQAGDESSHDFSYGSESCPY 64
Query: 268 PSRPAYGVDEERPTYQEENPSTGSDDFTXXXXXXXXXXXXXERPKPSS 411 A+ +DE+RPTY + ST S + RPKP S Sbjct: 65 EGGGAHDIDEQRPTY--GSGSTPSYEAEESTYVGGGGGSDYGRPKPQS 110
>tr|Q9LPZ0|Q9LPZ0_ARATH T23J18.11 (At1g11440) (Putative serine/threonine protein kinase) OS=Arabidopsis thaliana GN=At1g11440/T23J18_11 PE=2 SV=1 Length = 363
Score = 57.4 bits (137), Expect = 6e-07 Identities = 28/55 (50%), Positives = 33/55 (60%) Frame = +1
Query: 22 PSLLVRSSVAMAYPKARGEDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 P + SVA A E ++EYDPTP+ GGYD VA YG+P PS ETCYP Sbjct: 112 PQFSIYCSVASALDFNEPE----FDEYDPTPYGGGYDVVATYGKPLPPSVETCYP 162
>tr|Q7XXQ8|Q7XXQ8_ORYSJ Os06g0232000 protein OS=Oryza sativa subsp. japonica GN=Os06g0232000 PE=2 SV=1 Length = 381
Score = 56.6 bits (135), Expect = 1e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +1
Query: 76 EDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 ++P +++EYDPTP+ GGYD +GRP PS ETCYP Sbjct: 17 DEPDDFDEYDPTPYGGGYDLFITFGRPLPPSDETCYP 53
>tr|A2YAZ8|A2YAZ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22270 PE=4 SV=1 Length = 381
Score = 56.6 bits (135), Expect = 1e-06 Identities = 21/37 (56%), Positives = 28/37 (75%) Frame = +1
Query: 76 EDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 ++P +++EYDPTP+ GGYD +GRP PS ETCYP Sbjct: 17 DEPDDFDEYDPTPYGGGYDLFITFGRPLPPSDETCYP 53
>tr|B4G1E6|B4G1E6_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 329
Score = 56.2 bits (134), Expect = 1e-06 Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 3/46 (6%) Frame = +1
Query: 58 YPKARG---EDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 Y + RG E+ +++E+DPTP+ GGYD +GRP PS+ETCYP Sbjct: 6 YERPRGGAVEEADDFDEFDPTPYGGGYDLAVTFGRPLPPSEETCYP 51
>tr|B4F957|B4F957_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 377
Score = 56.2 bits (134), Expect = 1e-06 Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 3/46 (6%) Frame = +1
Query: 58 YPKARG---EDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 Y + RG E+ +++E+DPTP+ GGYD +GRP PS+ETCYP Sbjct: 6 YERPRGGAVEEADDFDEFDPTPYGGGYDLAVTFGRPLPPSEETCYP 51
>tr|B6T4Q5|B6T4Q5_MAIZE Pro-resilin OS=Zea mays PE=2 SV=1 Length = 393
Score = 55.1 bits (131), Expect = 3e-06 Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 3/46 (6%) Frame = +1
Query: 58 YPKARG---EDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 Y + RG E+ +++E+DPTP+ GGYD +GRP P++ETCYP Sbjct: 6 YERPRGGAVEEADDFDEFDPTPYGGGYDLAVTFGRPLPPTEETCYP 51
>tr|A7R6C3|A7R6C3_VITVI Chromosome undetermined scaffold_1227, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008089001 PE=4 SV=1 Length = 359
Score = 55.1 bits (131), Expect = 3e-06 Identities = 23/45 (51%), Positives = 31/45 (68%) Frame = +1
Query: 52 MAYPKARGEDPLNYEEYDPTPFSGGYDQVALYGRPKSPSQETCYP 186 ++Y K+ +P ++EEYDPTP+ GGYD YG+P PS E CYP Sbjct: 101 VSYNKSGFNEP-DFEEYDPTPYGGGYDIAQTYGKPLPPSDEICYP 144
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