DK956003 |
Clone id |
TST39A01NGRL0024_J16 |
Library |
TST39 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J16. 5' end sequence. |
Accession |
DK956003 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL405Contig1 |
Sequence |
GTCTTCCTCTACGGCAGAGAGCTTGAACGGAGAGCATGGGGCGACCGCCGTCAGGAGAAA TGCCCGTTTTTCGATTTCTGCCGAACGAGGTGAACAAACTACTGAGCCTTTGGGAGGATT GCAAAATTAGTGGTCCACCTAATGAAGTTCTGCAAGATCTAGTTGAGAAGTTCAGCAAAG CCAGAGAGCAAGATGGGAAAGGATGTGTGAATCGAAGGCAGGTGCTCCAGTGGTTTCAAA ACAGACGGTGGTATGTACGTAAACAGGCAGAGAAACAATTGGGAAGGCTATCTGATAAAG AGTCCTTTTCGGAGAGGACGCAAACTACCATCAGTCCTCTCTCAGATGATTTAGATGTAG CTACCCCCACCACTCCTCCCTCAGATGAGATAGACATGAGTACAGTAGAGTTTGAAGCAA AGTCATCTAAAGATGGTGCTTGGTATGATGTGCGAACATTCTTAGAGCACAGAATGCTCG ACTCTGGACCAGAAGTACGTGTGCGCTTTGCAGGCTATGGGCCAGAAGATGATGAATGGG TGGATGTCAGAAGCGCCGTTCGGCAGCGCTCCTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q60554 |
Definition |
sp|Q60554|NKX61_MESAU Homeobox protein Nkx-6.1 OS=Mesocricetus auratus |
Align length |
74 |
Score (bit) |
37.0 |
E-value |
0.07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B8LNE3 |
Definition |
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
183 |
Score (bit) |
147.0 |
E-value |
3.0e-34 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956003|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_J16, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea... 147 3e-34 tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g1838... 135 1e-30 tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Ar... 135 1e-30 tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea m... 135 1e-30 tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert seque... 134 5e-30 tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea m... 130 4e-29 tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea m... 112 1e-23 tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aest... 99 1e-19 tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome ... 96 1e-18 tr|A2YD14|A2YD14_ORYSI Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|Q9LS52|Q9LS52_ARATH Gb|AAD39678.1 OS=Arabidopsis thaliana PE=... 96 2e-18 tr|A5C728|A5C728_VITVI Putative uncharacterized protein OS=Vitis... 95 2e-18 tr|A7P748|A7P748_VITVI Chromosome chr9 scaffold_7, whole genome ... 94 4e-18 tr|B4FBT7|B4FBT7_MAIZE Putative uncharacterized protein OS=Zea m... 92 2e-17 tr|A7P1U9|A7P1U9_VITVI Chromosome chr19 scaffold_4, whole genome... 92 3e-17 tr|Q0DC52|Q0DC52_ORYSJ Os06g0483900 protein (Fragment) OS=Oryza ... 88 3e-16 tr|Q6ES95|Q6ES95_ORYSJ Os09g0346900 protein OS=Oryza sativa subs... 87 9e-16 tr|B8BEP8|B8BEP8_ORYSI Putative uncharacterized protein OS=Oryza... 87 9e-16 tr|Q2PEU2|Q2PEU2_TRIPR Putative uncharacterized protein OS=Trifo... 84 6e-15 tr|Q9XI47|Q9XI47_ARATH F9L1.16 (Uncharacterized protein At1g1521... 84 7e-15 tr|A8MRU8|A8MRU8_ARATH Uncharacterized protein At1g15215.3 OS=Ar... 84 7e-15 tr|Q8GYR2|Q8GYR2_ARATH Putative uncharacterized protein (Putativ... 82 3e-14 tr|A3BBU9|A3BBU9_ORYSJ Putative uncharacterized protein OS=Oryza... 80 1e-13 tr|A7P1V0|A7P1V0_VITVI Chromosome chr19 scaffold_4, whole genome... 75 2e-12 tr|B8B2E9|B8B2E9_ORYSI Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|A3BBV7|A3BBV7_ORYSJ Putative uncharacterized protein OS=Oryza... 71 4e-11 tr|B4FI09|B4FI09_MAIZE Putative uncharacterized protein OS=Zea m... 71 5e-11 tr|Q0DC47|Q0DC47_ORYSJ Os06g0485100 protein OS=Oryza sativa subs... 65 3e-09 tr|A5BT31|A5BT31_VITVI Putative uncharacterized protein OS=Vitis... 65 3e-09 tr|A3BXT4|A3BXT4_ORYSJ Putative uncharacterized protein OS=Oryza... 63 1e-08
>tr|B8LNE3|B8LNE3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 373
Score = 147 bits (372), Expect = 3e-34 Identities = 82/183 (44%), Positives = 114/183 (62%), Gaps = 4/183 (2%) Frame = +3
Query: 36 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 215 MGRPP PVFRF EV ++ + ED K + P ++++ L EKFS + E+DGK V Sbjct: 1 MGRPPLSGAPVFRFSSKEVQEMEKVLEDTKGAIPNRDMIRSLAEKFSASPERDGKILVQI 60
Query: 216 RQVLQWFQNRRWYVRKQAEKQLGRLSDK---ESFSERTQTTISPLSDDLDVATPTTPPSD 386 +QV WFQN+R+ + ++ K G + +S ++R T+ + + V Sbjct: 61 KQVWTWFQNKRYSQKTKSTKVQGNAAPSPRDDSVAKRAVTSSAAVPSGRKVP-------- 112
Query: 387 EIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 563 D + +EFEAKSS+DGAWYDV +F+ HRM +SG PEVRVRFAG+G E+DEWV+VR VR Sbjct: 113 --DGAEMEFEAKSSRDGAWYDVASFVTHRMFESGDPEVRVRFAGFGAEEDEWVNVRKCVR 170
Query: 564 QRS 572 QRS Sbjct: 171 QRS 173
>tr|Q8RWJ7|Q8RWJ7_ARATH Putative uncharacterized protein At3g18380 OS=Arabidopsis thaliana GN=At3g18380 PE=2 SV=1 Length = 348
Score = 135 bits (341), Expect = 1e-30 Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 22/201 (10%) Frame = +3
Query: 36 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 215 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 216 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 359 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 360 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 509 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 510 AGYGPEDDEWVDVRSAVRQRS 572 AG+ E+DEW++V+ VRQRS Sbjct: 179 AGFEVEEDEWINVKKHVRQRS 199
>tr|Q3E7G2|Q3E7G2_ARATH Uncharacterized protein At3g18380.2 OS=Arabidopsis thaliana GN=At3g18380 PE=4 SV=1 Length = 349
Score = 135 bits (341), Expect = 1e-30 Identities = 81/201 (40%), Positives = 117/201 (58%), Gaps = 22/201 (10%) Frame = +3
Query: 36 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 215 MGRPPS P FRF+ EV ++ ++ + P +L+ L +KFS++ E+ GK V Sbjct: 1 MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60
Query: 216 RQVLQWFQNRRWYVRKQAEKQLGRLS----DKESFSERTQTTISPLS--------DDLDV 359 +Q+ WFQNRR+ +R + K G+L+ + + ++ I PLS +L Sbjct: 61 KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120
Query: 360 ATPTTPPSDEI---------DMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRF 509 TP PS + D S +EFEAKS++DGAWYDV+ FL HR L+ G PEV+VRF Sbjct: 121 MTPA--PSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRF 178
Query: 510 AGYGPEDDEWVDVRSAVRQRS 572 AG+ E+DEW++V+ VRQRS Sbjct: 179 AGFEVEEDEWINVKKHVRQRS 199
>tr|B7ZYP9|B7ZYP9_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 380
Score = 135 bits (341), Expect = 1e-30 Identities = 77/190 (40%), Positives = 107/190 (56%), Gaps = 11/190 (5%) Frame = +3
Query: 36 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 215 MGRPPS P FRFLP+EV ++ + P VLQ L +KFS + E+ GK + Sbjct: 1 MGRPPSAGAPAFRFLPSEVAEMEARLLQLNNGIPTRAVLQTLADKFSASPERAGKVAIQP 60
Query: 216 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVAT---------- 365 +QV WFQNRR+ R + + K + S + + A Sbjct: 61 KQVWNWFQNRRYSHRAKTPRAASSPPAKMTPSGADHHQHAANASAFRAAQLSSVAAAHHG 120
Query: 366 PTTPPSDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWV 542 ++ + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW+ Sbjct: 121 SSSTGKNPVESVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWI 180
Query: 543 DVRSAVRQRS 572 +VR VRQRS Sbjct: 181 NVRKCVRQRS 190
>tr|Q67W46|Q67W46_ORYSJ cDNA clone:001-006-D08, full insert sequence OS=Oryza sativa subsp. japonica GN=OJ1568_D07.5-1 PE=2 SV=1 Length = 370
Score = 134 bits (336), Expect = 5e-30 Identities = 76/183 (41%), Positives = 108/183 (59%), Gaps = 4/183 (2%) Frame = +3
Query: 36 MGRPPSGEMPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNR 215 MGRPPS P FRF EV ++ + + + P V+Q L +KF+ + + GK V Sbjct: 1 MGRPPSTGGPAFRFTQAEVAEMEARLQQLNNAIPHRSVIQALADKFTSSPARSGKVAVQP 60
Query: 216 RQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATP-TTPPSDE- 389 +QV WFQNRR+ R ++ + L + + SP + A+ + PS + Sbjct: 61 KQVWNWFQNRRYSHRSRSSRGPPTLMQTKMLPTGSDEHKSPPFRAMPSASAHSGSPSGKG 120
Query: 390 -IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVR 563 ++ VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW++VR VR Sbjct: 121 SLESGQVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVR 180
Query: 564 QRS 572 QRS Sbjct: 181 QRS 183
>tr|B4FT43|B4FT43_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 382
Score = 130 bits (328), Expect = 4e-29 Identities = 77/191 (40%), Positives = 109/191 (57%), Gaps = 12/191 (6%) Frame = +3
Query: 36 MGRPPSGE-MPVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVN 212 MGRPPS P FRFLP+EV ++ + P +LQ L +KFS + E+ GK + Sbjct: 1 MGRPPSTTGAPAFRFLPSEVAEMEARLLQLNNGIPTRAMLQTLADKFSASPERAGKVAIQ 60
Query: 213 RRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPP---- 380 +QV WFQNRR+ R + + + K + S + + A P++ Sbjct: 61 PKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSGADHHQHAANASAFRAAQPSSVAVAHH 120
Query: 381 ------SDEIDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSG-PEVRVRFAGYGPEDDEW 539 + ++ +VEFEAKS++DGAWYDV FL HR+ +SG PEVRVRF+G+G E+DEW Sbjct: 121 GSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFLSHRLFESGDPEVRVRFSGFGAEEDEW 180
Query: 540 VDVRSAVRQRS 572 ++VR VRQRS Sbjct: 181 INVRKCVRQRS 191
>tr|B7ZYW3|B7ZYW3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 360
Score = 112 bits (281), Expect = 1e-23 Identities = 63/157 (40%), Positives = 91/157 (57%), Gaps = 11/157 (7%) Frame = +3
Query: 135 PPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSE 314 P +LQ L +KFS + E+ GK + +QV WFQNRR+ R + + + K + S Sbjct: 13 PTRAMLQTLADKFSASPERAGKVAIQPKQVWNWFQNRRYSHRAKTTRVVPSPPAKMTPSG 72
Query: 315 RTQTTISPLSDDLDVATPTTPP----------SDEIDMSTVEFEAKSSKDGAWYDVRTFL 464 + + A P++ + ++ +VEFEAKS++DGAWYDV FL Sbjct: 73 ADHHQHAANASAFRAAQPSSVAVAHHGSSSTGKNPMEGVSVEFEAKSARDGAWYDVAAFL 132
Query: 465 EHRMLDSG-PEVRVRFAGYGPEDDEWVDVRSAVRQRS 572 HR+ +SG PEVRVRF+G+G E+DEW++VR VRQRS Sbjct: 133 SHRLFESGDPEVRVRFSGFGAEEDEWINVRKCVRQRS 169
>tr|B0LX55|B0LX55_WHEAT Homeobox-like resistance OS=Triticum aestivum GN=HLRG PE=2 SV=1 Length = 337
Score = 99.4 bits (246), Expect = 1e-19 Identities = 65/179 (36%), Positives = 93/179 (51%), Gaps = 5/179 (2%) Frame = +3
Query: 51 SGEMP--VFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKA--REQDGKGCVNRR 218 +G+ P +FRF EV K+ + D P + V+Q L + F+ + R DGK V Sbjct: 2 TGQAPSLLFRFTDTEVAKMEEVLRDLNAM-PKHPVIQGLTDDFNASPDRSGDGKVPVQYN 60
Query: 219 QVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSDEIDM 398 QV WFQNRR Q+ K + + P++++ + + +D Sbjct: 61 QVRNWFQNRR---SAQSRKMM----------------VPPVAEEHHPVDGSYSGNSSLDG 101
Query: 399 STVEFEAKSSKDGAWYDVRTFLEHRMLDS-GPEVRVRFAGYGPEDDEWVDVRSAVRQRS 572 V+FEAKS+ +GAWYDV FL HR + + PEV VRF GPE+DEW++VR VR RS Sbjct: 102 GHVQFEAKSAINGAWYDVAAFLSHRFIGTKDPEVLVRFTWLGPEEDEWINVRKCVRLRS 160
>tr|A7P4B6|A7P4B6_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032090001 PE=4 SV=1 Length = 314
Score = 96.3 bits (238), Expect = 1e-18 Identities = 65/179 (36%), Positives = 89/179 (49%), Gaps = 13/179 (7%) Frame = +3
Query: 75 FLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCVNRRQVLQWFQNRRWY 254 F EV K+ + ++ + + L F+++ + GK + +V WFQ+R Sbjct: 15 FTKLEVEKMEKVLKESGEQALNPDFCKRLTGGFNRSSGRAGKPAIKWIEVQSWFQDR--- 71
Query: 255 VRKQAEKQLGRLSDKESFSERTQTTISP--LSDDLDVATPTTP----------PSDEIDM 398 E T P +S +L V T P P + D+ Sbjct: 72 -----------------LQECTHKVSCPPNVSKELCVLPETFPSNKLHESSQMPEGDPDL 114
Query: 399 STVEFEAKSSKDGAWYDVRTFLEHRMLDSGP-EVRVRFAGYGPEDDEWVDVRSAVRQRS 572 S +EFEA+SSKDGAWYDV TFL HR L SG EVRVRF G+G E+DEWV+V+ AVR+RS Sbjct: 115 SELEFEARSSKDGAWYDVDTFLTHRFLSSGELEVRVRFVGFGAEEDEWVNVKKAVRERS 173
>tr|A2YD14|A2YD14_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23007 PE=4 SV=1 Length = 280
Score = 95.9 bits (237), Expect = 1e-18 Identities = 66/197 (33%), Positives = 92/197 (46%), Gaps = 18/197 (9%) Frame = +3
Query: 36 MGRPPSGEM--PVFRFLPNEVNKLLSLWEDCKISGPPNEVLQDLVEKFSKAREQDGKGCV 209 MGRPP+ P FRF EV ++ SL P ++Q L ++F+ + + GK V Sbjct: 1 MGRPPTPSTGGPGFRFTQEEVAEMESLLRHLNNGIPDGSLIQSLADRFTASAARAGKVGV 60
Query: 210 NRRQVLQWFQNRRWYVRKQAEKQLGRLSDKESFSERTQTTISPLSDDLDVATPTTPPSDE 389 +Q ++ Q R + L D +S R+ S + Sbjct: 61 RSKQNRKYSQRSR----NSTKMLLAASGDHKSAFARSSVQKSV--------------KNS 102
Query: 390 IDMSTVEFEAKSSKDGAWYDVRTFLEHRMLDSGP----------------EVRVRFAGYG 521 ++ +EFEAKS +DGAWYDV FL HR+ SG EV VRF+G+G Sbjct: 103 LEGGQLEFEAKSVRDGAWYDVAAFLSHRLSQSGELNIISTGTTIGMIGALEVWVRFSGFG 162
Query: 522 PEDDEWVDVRSAVRQRS 572 DDEW+DVR+ VRQRS Sbjct: 163 ARDDEWIDVRTCVRQRS 179
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