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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956007
Clone id TST39A01NGRL0024_J20
Library
Length 603
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J20. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence 
AGAGCCGACGAGGCAGCTCACAGCCTCACAGAGCGAGAGAGAGCGAGAGAGAGAGAGAGG
AAGCTTTTGCGTGCGTGCACGGTGCACCCACATCTTTACCTCCGCGCCAACGCCCGCAGT
ATCTGCAAACAGATCCAACATTGCACGAGTTTCATCGCCACCACCTGGTCTTCTGCCCTC
CTCAAATTCCCCAGCTTCGACTTCGAGCTTTATCTCTACAGCCCATCTGTGTAGACGTAA
AGGCAGAGCAACGGCAAGGTGCGCCTGCTGCGGAGAAAGGCGTTTCATCTCCATAGGCCA
TCTGTGTAGAAGAAAACGCAGAGCAAGGGCAGGTGCCTACTGCGGAGAAGGGACCTTCAT
CTAGGAAACACAGAGCAAGGGCAAGGTTTGCCTCCTGCGGATAAGTGGGCATGCTCGCAT
ACAGTACAGCTCTGACTACAATAGTTGGGGTCTGATGCCCCTCTCCACTGCGCTCATGGG
CTTTTATTTCACAATGTACCTTGGTGAGGTTTTCCCTAGCCACAATCAGATGCCTGCATT
GCCTGAAGATGCATTCTGGGAGATTTTGTGCGCACACAGCCTTTTTGTAGTCTTGCAAAA
GTC
■■Homology search results ■■ -
sp_hit_id Q99034
Definition sp|Q99034|AXE1_TRIRE Acetylxylan esterase OS=Trichoderma reesei
Align length 71
Score (bit) 36.2
E-value 0.13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956007|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J20, 5'
         (603 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99034|AXE1_TRIRE Acetylxylan esterase OS=Trichoderma reesei ...    36   0.13 
sp|Q2UUI3|CCR4_ASPOR Glucose-repressible alcohol dehydrogenase t...    33   1.5  
sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens GN=...    32   3.2  
sp|Q7Z494|NPHP3_HUMAN Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE...    32   3.3  
sp|Q90WC0|VMSA1_AGKHB Zinc metalloproteinase/disintegrin (Fragme...    31   4.2  
sp|Q3U3D7|T131L_MOUSE Transmembrane protein 131-like OS=Mus musc...    31   4.2  
sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RN...    31   4.2  
sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus ...    31   4.2  
sp|Q90YA6|DIS2_TRIEL Zinc metalloproteinase/disintegrin OS=Trime...    31   4.2  
sp|O73795|VMMTB_AGKHB Zinc metalloproteinase/disintegrin OS=Agki...    31   5.5  
sp|P53334|SCW4_YEAST Probable family 17 glucosidase SCW4 OS=Sacc...    31   5.5  
sp|Q5XI59|RNF10_RAT RING finger protein 10 OS=Rattus norvegicus ...    30   7.2  
sp|Q3UIW5|RNF10_MOUSE RING finger protein 10 OS=Mus musculus GN=...    30   7.2  
sp|Q98SP2|VMJA2_BOTJA Zinc metalloproteinase/disintegrin OS=Both...    30   9.4  
sp|Q0NZX5|DISJA_BOTJA Disintegrin jarastatin (Fragment) OS=Bothr...    30   9.4  
sp|Q0CT27|CCR4_ASPTN Glucose-repressible alcohol dehydrogenase t...    30   9.4  

>sp|Q99034|AXE1_TRIRE Acetylxylan esterase OS=Trichoderma reesei
           GN=axe1 PE=1 SV=1
          Length = 302

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 22/71 (30%), Positives = 30/71 (42%)
 Frame = -3

Query: 319 AFSSTQMAYGDETPFSAAGAPCRCSAFTSTQMGCRDKARSRSWGI*GGQKTRWWR*NSCN 140
           AF ++Q++ G   P    G P   S  TST+ G         WG  GGQ   W     C 
Sbjct: 231 AFINSQLSSGGSQP--PGGGPTSTSRPTSTRTGSSPGPTQTHWGQCGGQ--GWTGPTQCE 286

Query: 139 VGSVCRYCGRW 107
            G+ C+   +W
Sbjct: 287 SGTTCQVISQW 297


>sp|Q2UUI3|CCR4_ASPOR Glucose-repressible alcohol dehydrogenase
           transcriptional effector OS=Aspergillus oryzae GN=ccr4
           PE=3 SV=1
          Length = 746

 Score = 32.7 bits (73), Expect = 1.5
 Identities = 16/41 (39%), Positives = 26/41 (63%)
 Frame = +2

Query: 425 YSSDYNSWGLMPLSTALMGFYFTMYLGEVFPSHNQMPALPE 547
           Y+ D+   GL  LST+L  + F   L E++ +HN++ ALP+
Sbjct: 228 YALDFGGQGLRALSTSLFSYDF---LKELYLNHNKLKALPQ 265


>sp|Q8N5U6|RNF10_HUMAN RING finger protein 10 OS=Homo sapiens
           GN=RNF10 PE=1 SV=2
          Length = 811

 Score = 31.6 bits (70), Expect = 3.2
 Identities = 26/88 (29%), Positives = 37/88 (42%)
 Frame = +3

Query: 75  VHGAPTSLPPRQRPQYLQTDPTLHEFHRHHLVFCPPQIPQLRLRALSLQPICVDVKAEQR 254
           + G   S   RQR +YL   P   EF    L   PP + +  L   S      D++  +R
Sbjct: 548 IAGYSMSEDVRQRHRYLSHLPLTCEFSICELALQPPVVSKETLEMFS-----DDIEKRKR 602

Query: 255 QGAPAAEKGVSSP*AICVEENAEQGQVP 338
           Q    A +       I +EEN +QG+ P
Sbjct: 603 QRQKKAREERRRERRIEIEENKKQGKYP 630


>sp|Q7Z494|NPHP3_HUMAN Nephrocystin-3 OS=Homo sapiens GN=NPHP3 PE=1
            SV=1
          Length = 1330

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +1

Query: 271  RRKAFHLHRPSV*KKTQSKGRCLLRRRDLHLGNTEQGQGLP 393
            R+K+F +H+ ++ KK    G  LLRRR L L     G+  P
Sbjct: 1050 RKKSFKIHQKAIKKKGNLYGFALLRRRALQLEELTLGKDTP 1090


>sp|Q90WC0|VMSA1_AGKHB Zinc metalloproteinase/disintegrin (Fragment)
           OS=Agkistrodon halys brevicaudus PE=1 SV=1
          Length = 317

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 236 RKGRATARCACCGERRFISIGHLCRRKRRARAGAYC 343
           R+G   A   CC + RF+  G +CRR R      YC
Sbjct: 268 RQGAQCAEGLCCDQCRFMKEGTICRRARGDDLDDYC 303


>sp|Q3U3D7|T131L_MOUSE Transmembrane protein 131-like OS=Mus musculus
            GN=Kiaa0922 PE=2 SV=1
          Length = 1597

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 30/100 (30%), Positives = 45/100 (45%)
 Frame = +3

Query: 87   PTSLPPRQRPQYLQTDPTLHEFHRHHLVFCPPQIPQLRLRALSLQPICVDVKAEQRQGAP 266
            P S  P+  PQYLQ+D  L E  R H      Q   +R    S +P    V+A   + + 
Sbjct: 1113 PESTLPKTPPQYLQSD--LPEVSRKH---GNKQQAPVRSEVDSFEP----VRAADAEPSS 1163

Query: 267  AAEKGVSSP*AICVEENAEQGQVPTAEKGPSSRKHRARAR 386
              +   +SP   C    +E+   P+AE+   SRK + + R
Sbjct: 1164 VRKTQGASPEDTC----SEKQDTPSAEQEDPSRKRKLQER 1199


>sp|Q08E13|RNF10_BOVIN RING finger protein 10 OS=Bos taurus GN=RNF10
           PE=2 SV=1
          Length = 810

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 26/88 (29%), Positives = 37/88 (42%)
 Frame = +3

Query: 75  VHGAPTSLPPRQRPQYLQTDPTLHEFHRHHLVFCPPQIPQLRLRALSLQPICVDVKAEQR 254
           + G   S   RQR +YL   P   EF    L   PP + +  L   S      D++  +R
Sbjct: 547 ISGYSMSEDMRQRHRYLSHLPLTCEFSICELALQPPLVSKETLEIFS-----DDIEKRKR 601

Query: 255 QGAPAAEKGVSSP*AICVEENAEQGQVP 338
           Q    A +       I +EEN +QG+ P
Sbjct: 602 QRQKKAREERRRERRIEMEENKKQGKYP 629


>sp|Q6NZQ4|PAXI1_MOUSE PAX-interacting protein 1 OS=Mus musculus
           GN=Paxip1 PE=1 SV=1
          Length = 1056

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 135 PTLHEFHRHHLVFCPPQIPQLRLRALSLQPICVDVKAEQRQ 257
           P  H   +HH    PPQ PQ +  AL LQP  + ++ +Q+Q
Sbjct: 391 PETHVLQQHH----PPQQPQQQHPALHLQPQIMQLQQQQQQ 427


>sp|Q90YA6|DIS2_TRIEL Zinc metalloproteinase/disintegrin
           OS=Trimeresurus elegans PE=1 SV=1
          Length = 481

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = +2

Query: 239 KGRATARCA---CCGERRFISIGHLCRRKRRARAGAYC 343
           K R  A+CA   CC + RFI  G +CRR R      YC
Sbjct: 430 KLRPGAQCADGLCCDQCRFIEEGIICRRARGDDLDDYC 467


>sp|O73795|VMMTB_AGKHB Zinc metalloproteinase/disintegrin
           OS=Agkistrodon halys brevicaudus PE=2 SV=2
          Length = 505

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 236 RKGRATARCACCGERRFISIGHLCRRKRRARAGAYC 343
           R+G   A   CC + RF+  G +CRR R      YC
Sbjct: 456 RQGAQCAEGLCCDQCRFMKEGTICRRGRGDDLDDYC 491
tr_hit_id B4JC42
Definition tr|B4JC42|B4JC42_DROGR GH10704 OS=Drosophila grimshawi
Align length 111
Score (bit) 34.7
E-value 4.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956007|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J20, 5'
         (603 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4JC42|B4JC42_DROGR GH10704 OS=Drosophila grimshawi GN=GH1070...    35   4.4  
tr|A9ELA6|A9ELA6_9RHOB Putative uncharacterized protein OS=Phaeo...    34   7.5  
tr|A8IDB2|A8IDB2_AZOC5 Transcriptional regulator OS=Azorhizobium...    33   9.8  
tr|B6KVI8|B6KVI8_TOXGO Putative uncharacterized protein OS=Toxop...    33   9.8  

>tr|B4JC42|B4JC42_DROGR GH10704 OS=Drosophila grimshawi GN=GH10704
            PE=4 SV=1
          Length = 3029

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 36/111 (32%), Positives = 46/111 (41%), Gaps = 15/111 (13%)
 Frame = +3

Query: 87   PTSL--PPRQRPQYLQTDPTLHEFHRHHLVFC-PPQIPQLRLRALSL---QPICVDVKAE 248
            P SL  PP   PQ  Q  P +H   + HL    PPQ  QL   ALS    QP+     A 
Sbjct: 2531 PASLLPPPPPSPQQQQLPPGMHPMLQRHLAPAPPPQAMQLLQNALSAPLGQPLSRANYAP 2590

Query: 249  QRQGAPAAEK---GVSSP*AICVEENAE------QGQVPTAEKGPSSRKHR 374
            Q+Q  P  ++   G+S P A      A       +  VP  E  P  R+ +
Sbjct: 2591 QQQQLPGMQRLPLGMSMPAAAAHLMQAAAAAANIRPPVPAPEPKPRGRRKK 2641


>tr|A9ELA6|A9ELA6_9RHOB Putative uncharacterized protein
           OS=Phaeobacter gallaeciensis 2.10 GN=RG210_13831 PE=4
           SV=1
          Length = 177

 Score = 33.9 bits (76), Expect = 7.5
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 468 LRSWAFISQCTLVRFSLATIRCLHCLKMHSGRFCAHTAFL 587
           +R WAF   C   R SL ++     + MH G  C H AF+
Sbjct: 55  MREWAFSLPCVENRDSLVSVPGARAMVMHDGAACNHDAFM 94


>tr|A8IDB2|A8IDB2_AZOC5 Transcriptional regulator OS=Azorhizobium
           caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
           GN=lysR PE=4 SV=1
          Length = 323

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +3

Query: 156 RHH--LVFCPPQIPQLRLRALSLQPICVDVKAEQ---RQGAPAAEKGVS 287
           R+H  LV+  P  P+LR  A S QPIC+ V  +    RQGAP   + V+
Sbjct: 160 RYHIGLVYNAPPDPRLRTAASSRQPICLVVSPDHPLARQGAPVPLRAVA 208


>tr|B6KVI8|B6KVI8_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_010590 PE=4 SV=1
          Length = 572

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 28/107 (26%), Positives = 46/107 (42%)
 Frame = +3

Query: 81  GAPTSLPPRQRPQYLQTDPTLHEFHRHHLVFCPPQIPQLRLRALSLQPICVDVKAEQRQG 260
           G P+  P  QR      + T  EF+R HL      + QL  RAL+L+        ++ Q 
Sbjct: 233 GDPSPPPKVQR----YWEHTRREFYRRHLRERQEHVRQLEARALALE--------QELQS 280

Query: 261 APAAEKGVSSP*AICVEENAEQGQVPTAEKGPSSRKHRARARFASCG 401
             +A +G  +  +   E   +  + P + K  +  KH ++   AS G
Sbjct: 281 LLSATRGHEAAPSREAESTGKSSETPKSGKRKAKTKHLSQTPSASAG 327