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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956010
Clone id TST39A01NGRL0024_J23
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_J23. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
GTGAGAGACAGCGAACGAAGATGGGAGAGGAGGGCAATCTTACGCAGCCGATCGCCGCTG
CGCAGACGGCGATCACGACGGAGCAATTCAATCTCTGGAAGCAGCGCAAGGTTCTTTCCT
CTCTCATTCGCATGTAACGCACATCTTGCAGTCTCTGCATTCACTCAAACTTTCTTCAGG
ATGCAGAAGCTGCTGCGAAATGTGCAGAGGTTGCAAGAAAAAGGGCAGACGACATTGCTT
CTGGCAGACTCCAAATGAATGGCAAAGAGCTCTACCAACATGAGCCCTGGGTCTTCGACG
ACTCCAACTTCACATAGCGATGCAGGCATGGGGTGCTTTTCTGTGGTATATCTGCCATGC
GTTGCTTTTCTGTTTAAGGACTGGTGTGTACATCAACATGGGTTGGTAACCTGTGCGTAG
ATGTGGAGGTCTTCTGAACGGACGTTCGCTTTTGGATAGGAGGCAAATCGATATGTTCCT
TTGGTGT
■■Homology search results ■■ -
sp_hit_id Q8CJ69
Definition sp|Q8CJ69|BMPER_MOUSE BMP-binding endothelial regulator protein OS=Mus musculus
Align length 27
Score (bit) 32.3
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956010|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J23, 5'
         (487 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8CJ69|BMPER_MOUSE BMP-binding endothelial regulator protein ...    32   1.2  
sp|Q0AET9|HIS2_NITEC Phosphoribosyl-ATP pyrophosphatase OS=Nitro...    31   3.4  
sp|A0MSJ1|CORA1_DANRE Collagen alpha-1(XXVII) chain OS=Danio rer...    30   4.5  
sp|P0C690|DPOL_HBVC9 Protein P OS=Hepatitis B virus genotype C s...    30   7.5  

>sp|Q8CJ69|BMPER_MOUSE BMP-binding endothelial regulator protein
           OS=Mus musculus GN=Bmper PE=1 SV=1
          Length = 685

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
 Frame = +2

Query: 188 SCCEMCRGCKKKGRRH---CFWQTPNE 259
           +CCE C+GC  +GR +     WQTP E
Sbjct: 100 ACCERCKGCTHEGRTYNSSFKWQTPAE 126


>sp|Q0AET9|HIS2_NITEC Phosphoribosyl-ATP pyrophosphatase
           OS=Nitrosomonas eutropha (strain C91) GN=hisE PE=3 SV=1
          Length = 117

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = +2

Query: 89  QSLEAAQGSFLSHSHVTHILQSLHSLKLSSGCRSCCEMCRGCKKKGRRHCFWQTPNEWQR 268
           Q++EA + +  +HS++  +L S     L        E    CK   R    ++T + W  
Sbjct: 13  QTIEARKSADPAHSYIAKLLSSNEDKVLKKIAEEAAETIMACKDNDREQIIYETADLWFH 72

Query: 269 AL 274
            L
Sbjct: 73  CL 74


>sp|A0MSJ1|CORA1_DANRE Collagen alpha-1(XXVII) chain OS=Danio rerio
           GN=col27a1 PE=2 SV=1
          Length = 1658

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -1

Query: 463 PPIQKRTSVQKTSTSTHRLPTH-VDVHTSP*TEKQRMADIPQKSTPCLHRYVKLESSKT 290
           P  Q R   +K     H L  H + V  SP +++Q   DIP  +TP L    ++    T
Sbjct: 320 PTQQNRKKAKKERNKLHILKEHQISVTDSPTSQQQNQVDIPTTTTPELSSTFRVSEMTT 378


>sp|P0C690|DPOL_HBVC9 Protein P OS=Hepatitis B virus genotype C
           subtype ayw (isolate Australia/AustRC/1992) GN=P PE=3
           SV=1
          Length = 843

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
 Frame = -3

Query: 425 HIYAQVTNPC*CTHQSLNRKATHGRYTTEKHPMPASLCEVGVVEDPGLMLVELFAIHLES 246
           HI    ++   C HQS  RK TH   TT +   P+               VE  +I   S
Sbjct: 264 HIDNSASSSSSCIHQSAVRKTTHSHLTTAQRHSPSG------------HAVEFHSIPPSS 311

Query: 245 ARS-NVVCPFSCNLCTFRSS-----FCILKKV*VNAETARCALH 132
           A S +    FSC    FR+S     +C+   + ++ +   C  H
Sbjct: 312 AGSQSKGSVFSCWWLQFRNSKPCSEYCLSHLINLHEDWGPCIEH 355
tr_hit_id A9S6K5
Definition tr|A9S6K5|A9S6K5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 28
Score (bit) 55.8
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956010|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_J23, 5'
         (487 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9S6K5|A9S6K5_PHYPA Predicted protein OS=Physcomitrella paten...    56   1e-06
tr|A9NWR0|A9NWR0_PICSI Putative uncharacterized protein OS=Picea...    52   1e-05
tr|A9NK01|A9NK01_PICSI Putative uncharacterized protein OS=Picea...    52   1e-05
tr|B6SR47|B6SR47_MAIZE Putative uncharacterized protein OS=Zea m...    50   6e-05
tr|Q93Z58|Q93Z58_ARATH At1g22140/F2E2_13 (Putative uncharacteriz...    49   1e-04
tr|B8AQK3|B8AQK3_ORYSI Putative uncharacterized protein OS=Oryza...    48   2e-04
tr|B6T074|B6T074_MAIZE Putative uncharacterized protein OS=Zea m...    47   4e-04
tr|A7NV23|A7NV23_VITVI Chromosome chr18 scaffold_1, whole genome...    47   6e-04
tr|A5BVJ3|A5BVJ3_VITVI Putative uncharacterized protein OS=Vitis...    47   6e-04
tr|A8QDT2|A8QDT2_BRUMA Phorbol esters/diacylglycerol binding dom...    35   1.9  
tr|B5EJV2|B5EJV2_ACIF5 C4-dicarboxylate transporter/malic acid t...    34   4.2  
tr|B7JC87|B7JC87_THIFE C4-dicarboxylate transporter/malic acid t...    34   4.2  
tr|Q10QH5|Q10QH5_ORYSJ Putative uncharacterized protein OS=Oryza...    34   4.2  
tr|Q2GEX9|Q2GEX9_NEOSM Putative lipoprotein OS=Neorickettsia sen...    33   5.5  
tr|Q1ED23|Q1ED23_DANRE Si:ch211-22i13.2 protein OS=Danio rerio G...    33   7.2  

>tr|A9S6K5|A9S6K5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105859 PE=4 SV=1
          Length = 79

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSNF 311
           +DIA+GR++MNG+ELYQHEPWVFDDS F
Sbjct: 50  EDIAAGRVRMNGRELYQHEPWVFDDSRF 77


>tr|A9NWR0|A9NWR0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 83

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSNF 311
           +DI +GR+Q+NG+EL++HEPWVFDDS F
Sbjct: 54  EDIEAGRIQLNGRELFEHEPWVFDDSRF 81


>tr|A9NK01|A9NK01_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 82

 Score = 52.0 bits (123), Expect = 1e-05
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSNF 311
           +DI +GR+Q+NG+EL++HEPWVFDDS F
Sbjct: 54  EDIEAGRIQLNGRELFEHEPWVFDDSRF 81


>tr|B6SR47|B6SR47_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 84

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 20/26 (76%), Positives = 24/26 (92%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDS 305
           DDIASG  QMNG+EL+QHEPWVFD++
Sbjct: 57  DDIASGAAQMNGRELFQHEPWVFDNN 82


>tr|Q93Z58|Q93Z58_ARATH At1g22140/F2E2_13 (Putative uncharacterized
           protein) OS=Arabidopsis thaliana GN=At1g22140 PE=4 SV=1
          Length = 72

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 19/27 (70%), Positives = 25/27 (92%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSN 308
           +DIASGR+ MNG+EL+ HEPWVFDD++
Sbjct: 45  EDIASGRVPMNGRELFLHEPWVFDDTH 71


>tr|B8AQK3|B8AQK3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11842 PE=4 SV=1
          Length = 81

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 19/25 (76%), Positives = 24/25 (96%)
 Frame = +3

Query: 231 DIASGRLQMNGKELYQHEPWVFDDS 305
           DIASG +QMNG+EL++HEPWVFD+S
Sbjct: 55  DIASGAVQMNGRELFKHEPWVFDNS 79


>tr|B6T074|B6T074_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 84

 Score = 47.4 bits (111), Expect = 4e-04
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDD 302
           DDIASG +QMNG+EL+Q EPWVFD+
Sbjct: 57  DDIASGAVQMNGRELFQQEPWVFDN 81


>tr|A7NV23|A7NV23_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015273001
           PE=4 SV=1
          Length = 77

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSNF 311
           +DIA+G +QMNG+EL+ HEPWVFD++ +
Sbjct: 50  EDIAAGAVQMNGRELFLHEPWVFDNTRY 77


>tr|A5BVJ3|A5BVJ3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_009508 PE=3 SV=1
          Length = 887

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 17/28 (60%), Positives = 25/28 (89%)
 Frame = +3

Query: 228 DDIASGRLQMNGKELYQHEPWVFDDSNF 311
           +DIA+G +QMNG+EL+ HEPWVFD++ +
Sbjct: 860 EDIAAGAVQMNGRELFLHEPWVFDNTRY 887


>tr|A8QDT2|A8QDT2_BRUMA Phorbol esters/diacylglycerol binding domain
           OS=Brugia malayi GN=Bm1_50250 PE=4 SV=1
          Length = 852

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
 Frame = +2

Query: 65  DGDHDGAIQSLEAAQGSFLSHSHVTHILQSLHSLKLSSGCRSCCEM----------CRGC 214
           D  +DG +  +  A  S      + H + S+HS K  + C  C EM          CRGC
Sbjct: 74  DNIYDGMLIEVVIASRSSYQRFMMYHHVLSVHSYKSPTFCDFCGEMLFGLMKQGLKCRGC 133

Query: 215 KKKGRRHCFWQTPN 256
           K    + C  + PN
Sbjct: 134 KLNYHKRCASKIPN 147