DK956016 |
Clone id |
TST39A01NGRL0024_K05 |
Library |
TST39 |
Length |
595 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_K05. 5' end sequence. |
Accession |
DK956016 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1711Contig1 |
Sequence |
GATGTAACAGAACACGTTGACGATCTGCATATAGCCTCATATGAAATTGATCCAGATTTT GTCTTTGGTAGAAACGAGAGGAATCTGGAGGAGCCTGGCCTTACCAAGGAGCCTTGCGCA CATGAAGAAACATCCCTTACAGGAGCGCGGACTAGAAGAGAGCTTCTGACAGGAACTCTG CTGTCCGGCTTAGCAATGACAGTTTCCTTTCAAACAAGAAAAACGCTTGCGGCAGTAGCA CCAGTGCCAGCTGGAATGAAGGAGGCCTCCCCTGATGGAGTCAGTGCTCCCGCATCGGTA GAAAAACCTAGCGGCTCGAGAATTTATGATGCTTCCGTTCTTGGTGAACCATTTGCTGTA GGTAAAGACAAAGGACGCGTCTGGCAAAAAGTACTGGCAGCCCGTGTTGTCTATCTTGGA GAGTCTGAGAGAGTTCCAGATCCTGATGATAAGGTTCTTGAGTTAGAGATAGTCAAAACA ATCAGGGACAAATGTTTTGAGCAGAAGCGCCCTGTGTCACTGGCACTCGAAGCAGTTCCA TGCACCTTACAACCTCAATTAAATGCTTATATGAGCAAAAGGCTTTCTGACAAGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q96L91 |
Definition |
sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens |
Align length |
70 |
Score (bit) |
33.1 |
E-value |
1.1 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SSB4 |
Definition |
tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
93 |
Score (bit) |
141.0 |
E-value |
3.0e-32 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956016|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_K05, 5' (595 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomit... 141 3e-32 tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment) OS=Physcomit... 138 2e-31 tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family (... 130 6e-29 tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g4040... 130 6e-29 tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_1... 126 1e-27 tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g5614... 126 1e-27 tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis... 125 2e-27 tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza... 124 3e-27 tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert seque... 124 5e-27 tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza... 124 5e-27 tr|A7Q3Q9|A7Q3Q9_VITVI Chromosome chr13 scaffold_48, whole genom... 122 2e-26 tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza... 122 2e-26 tr|B6SLM6|B6SLM6_MAIZE Putative uncharacterized protein OS=Zea m... 109 1e-22 tr|Q65WW4|Q65WW4_ORYSJ Putative uncharacterized protein P0486C01... 39 0.29 tr|B8AZC2|B8AZC2_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.29 tr|A4LTT0|A4LTT0_BURPS Putative uncharacterized protein OS=Burkh... 36 1.4 tr|B6P254|B6P254_BRAFL Putative uncharacterized protein (Fragmen... 35 3.2 tr|Q6C5E7|Q6C5E7_YARLI YALI0E18700p OS=Yarrowia lipolytica GN=YA... 35 3.2 tr|B1J9X1|B1J9X1_PSEPW Putative uncharacterized protein OS=Pseud... 35 4.3 tr|Q7RNI8|Q7RNI8_PLAYO Porphobilinogen deaminase, putative OS=Pl... 35 4.3 tr|Q030W0|Q030W0_LACLS Isocitrate dehydrogenase [NADP] OS=Lactoc... 34 5.6 tr|A2RIZ1|A2RIZ1_LACLM Isocitrate dehydrogenase [NADP] OS=Lactoc... 34 5.6 tr|Q1YDW4|Q1YDW4_MOBAS Possible regulatory protein, MarR family ... 34 5.6 tr|B1YAL3|B1YAL3_THENV Carbamoyl-phosphate synthase, large subun... 34 5.6 tr|A1RTS0|A1RTS0_PYRIL Carbamoyl-phosphate synthase large subuni... 34 5.6 tr|A4HF65|A4HF65_LEIBR Putative uncharacterized protein OS=Leish... 34 7.2 tr|Q08SN7|Q08SN7_STIAU Putative uncharacterized protein OS=Stigm... 34 7.3 tr|Q8I5V2|Q8I5V2_PLAF7 Putative uncharacterized protein OS=Plasm... 34 7.3 tr|Q4Q8X1|Q4Q8X1_LEIMA Putative uncharacterized protein OS=Leish... 33 9.4
>tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_11257 PE=4 SV=1 Length = 582
Score = 141 bits (355), Expect = 3e-32 Identities = 67/93 (72%), Positives = 80/93 (86%) Frame = +1
Query: 313 GSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDK 492 GSR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LEL IV+ +RD Sbjct: 2 GSRVYDATVLGEPVAVGGERNRVWQKLLQARVVYLGEAERVPDPDDKILELGIVRKLRDA 61
Query: 493 CFEQKRPVSLALEAVPCTLQPQLNAYMSKRLSD 591 CFEQ RP+SLAL+A P +LQ L+AYMS RLSD Sbjct: 62 CFEQARPMSLALDAFPASLQKSLDAYMSNRLSD 94
>tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_20837 PE=4 SV=1 Length = 576
Score = 138 bits (348), Expect = 2e-31 Identities = 66/92 (71%), Positives = 78/92 (84%) Frame = +1
Query: 316 SRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKC 495 SR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LE+ IV+ +RD C Sbjct: 1 SRVYDATVLGEPVAVGGERSRVWQKLLQARVVYLGEAERVPDPDDKILEMGIVRKLRDAC 60
Query: 496 FEQKRPVSLALEAVPCTLQPQLNAYMSKRLSD 591 FEQ RPVSLAL+ P TLQ L+ YMSKRLSD Sbjct: 61 FEQARPVSLALDIFPVTLQKSLDKYMSKRLSD 92
>tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family (At2g40400/T3G21.17) OS=Arabidopsis thaliana GN=At2g40400 PE=2 SV=1 Length = 735
Score = 130 bits (327), Expect = 6e-29 Identities = 65/99 (65%), Positives = 76/99 (76%) Frame = +1
Query: 289 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 468 P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172
Query: 469 IVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585 IV+ +R +C E R +SLALEA P LQ QLN YM KR+ Sbjct: 173 IVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYMDKRM 211
>tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g40400 OS=Arabidopsis thaliana GN=At2g40400 PE=2 SV=1 Length = 735
Score = 130 bits (327), Expect = 6e-29 Identities = 65/99 (65%), Positives = 76/99 (76%) Frame = +1
Query: 289 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 468 P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172
Query: 469 IVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585 IV+ +R +C E R +SLALEA P LQ QLN YM KR+ Sbjct: 173 IVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYMDKRM 211
>tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_100 OS=Arabidopsis thaliana GN=F18O21_100 PE=4 SV=1 Length = 755
Score = 126 bits (316), Expect = 1e-27 Identities = 65/119 (54%), Positives = 83/119 (69%) Frame = +1
Query: 229 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 408 AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161
Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585 VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+ALEA P LQ QLN YM KR+ Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYMDKRM 220
>tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g56140 (At3g56140) OS=Arabidopsis thaliana GN=At3g56140 PE=2 SV=1 Length = 745
Score = 126 bits (316), Expect = 1e-27 Identities = 65/119 (54%), Positives = 83/119 (69%) Frame = +1
Query: 229 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 408 AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161
Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585 VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+ALEA P LQ QLN YM KR+ Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYMDKRM 220
>tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028159 PE=4 SV=1 Length = 749
Score = 125 bits (313), Expect = 2e-27 Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 6/125 (4%) Frame = +1
Query: 229 AAVAPVPAGMKEASPDGVSA--PASVEKPSG----SRIYDASVLGEPFAVGKDKGRVWQK 390 + VA G + P S PA+ EK SRIYDA+V+GEP A+GKDK +VW+K Sbjct: 101 SVVARAEEGTEAVMPAAASGTVPAAAEKKMEEAIVSRIYDATVIGEPMALGKDKRKVWEK 160
Query: 391 VLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAY 570 ++ AR+VYLGE+E+VP DD+ LELEIVK +R +C E +RP+SLALEA PC LQ LN Y Sbjct: 161 LMNARIVYLGEAEQVPIRDDRELELEIVKKLRKRCAENERPLSLALEAFPCNLQEXLNQY 220
Query: 571 MSKRL 585 M R+ Sbjct: 221 MDYRI 225
>tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_003830 PE=4 SV=1 Length = 822
Score = 124 bits (312), Expect = 3e-27 Identities = 70/126 (55%), Positives = 89/126 (70%), Gaps = 4/126 (3%) Frame = +1
Query: 220 KTLAAVAPVPAGMKEASPDGVSAPASVEKPSG---SRIYDASVLGEPFAVGKD-KGRVWQ 387 K A+ AP PA A+P AP S +P SR+YDA+V+GEP AVGKD + RVW+ Sbjct: 182 KQAASPAPGPA----AAP----APTSAGEPEAEALSRVYDATVIGEPQAVGKDARRRVWE 233
Query: 388 KVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNA 567 K++AARVVYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN Sbjct: 234 KLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQ 293
Query: 568 YMSKRL 585 +M +RL Sbjct: 294 FMDRRL 299
>tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert sequence OS=Oryza sativa subsp. japonica GN=B1088C09.2 PE=2 SV=1 Length = 723
Score = 124 bits (310), Expect = 5e-27 Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 4/126 (3%) Frame = +1
Query: 220 KTLAAVAPVPAGMKEASPDGVSAPASVEKPSG---SRIYDASVLGEPFAVGKD-KGRVWQ 387 K A+ AP PA A+P AP S +P SR+YDA+V+GEP AVGKD + RVW+ Sbjct: 76 KQAASPAPGPA----AAP----APTSAGEPEAEALSRVYDATVIGEPQAVGKDARRRVWE 127
Query: 388 KVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNA 567 K++AARVVYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN Sbjct: 128 KLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQ 187
Query: 568 YMSKRL 585 +M +R+ Sbjct: 188 FMDRRI 193
>tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04278 PE=4 SV=1 Length = 723
Score = 124 bits (310), Expect = 5e-27 Identities = 63/119 (52%), Positives = 84/119 (70%), Gaps = 1/119 (0%) Frame = +1
Query: 232 AVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKD-KGRVWQKVLAARV 408 A +P P + +P P E + SR+YDA+V+GEP AVGKD + RVW+K++AARV Sbjct: 78 AASPAPGPAEAPAPTSAGEP---EAEALSRVYDATVIGEPQAVGKDARRRVWEKLMAARV 134
Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585 VYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN +M +R+ Sbjct: 135 VYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQFMDRRI 193
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