DK956016
Clone id TST39A01NGRL0024_K05
Library
Length 595
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_K05. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
GATGTAACAGAACACGTTGACGATCTGCATATAGCCTCATATGAAATTGATCCAGATTTT
GTCTTTGGTAGAAACGAGAGGAATCTGGAGGAGCCTGGCCTTACCAAGGAGCCTTGCGCA
CATGAAGAAACATCCCTTACAGGAGCGCGGACTAGAAGAGAGCTTCTGACAGGAACTCTG
CTGTCCGGCTTAGCAATGACAGTTTCCTTTCAAACAAGAAAAACGCTTGCGGCAGTAGCA
CCAGTGCCAGCTGGAATGAAGGAGGCCTCCCCTGATGGAGTCAGTGCTCCCGCATCGGTA
GAAAAACCTAGCGGCTCGAGAATTTATGATGCTTCCGTTCTTGGTGAACCATTTGCTGTA
GGTAAAGACAAAGGACGCGTCTGGCAAAAAGTACTGGCAGCCCGTGTTGTCTATCTTGGA
GAGTCTGAGAGAGTTCCAGATCCTGATGATAAGGTTCTTGAGTTAGAGATAGTCAAAACA
ATCAGGGACAAATGTTTTGAGCAGAAGCGCCCTGTGTCACTGGCACTCGAAGCAGTTCCA
TGCACCTTACAACCTCAATTAAATGCTTATATGAGCAAAAGGCTTTCTGACAAGC
■■Homology search results ■■ -
sp_hit_id Q96L91
Definition sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens
Align length 70
Score (bit) 33.1
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956016|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_K05, 5'
(595 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens G... 33 1.1
sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus G... 32 3.2
sp|Q123F4|TRPC_POLSJ Indole-3-glycerol phosphate synthase OS=Pol... 31 5.4
sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo sap... 31 5.4
sp|P22137|CLH_YEAST Clathrin heavy chain OS=Saccharomyces cerevi... 31 5.4
sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF OS=Ar... 30 7.1
sp|Q8DKH2|ACSA_THEEB Acetyl-coenzyme A synthetase OS=Thermosynec... 30 9.1

>sp|Q96L91|EP400_HUMAN E1A-binding protein p400 OS=Homo sapiens
GN=EP400 PE=1 SV=3
Length = 3160

Score = 33.1 bits (74), Expect = 1.1
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1

Query: 199 TVSFQTRKTLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGR 378
T Q + + AP PA + A P VS PA+V G +V G A+G+ +
Sbjct: 2893 TSQLQAQGQMQTQAPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKA 2952

Query: 379 VWQKVLAARV 408
Q V+A V
Sbjct: 2953 AGQTVVAQPV 2962


>sp|Q8CHI8|EP400_MOUSE E1A-binding protein p400 OS=Mus musculus
GN=Ep400 PE=1 SV=2
Length = 3072

Score = 31.6 bits (70), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = +1

Query: 199 TVSFQTRKTLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGR 378
T Q + + P PA + A P VS PA+V G +V G A+G+ +
Sbjct: 2804 TSQLQAQGQMQTQTPQPAQVALAKPPVVSVPAAVVSSPGVTTLPMNVAGISVAIGQPQKT 2863

Query: 379 VWQKVLAARV 408
Q V+A V
Sbjct: 2864 AGQTVVAQPV 2873


>sp|Q123F4|TRPC_POLSJ Indole-3-glycerol phosphate synthase
OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=trpC
PE=3 SV=1
Length = 264

Score = 30.8 bits (68), Expect = 5.4
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1

Query: 223 TLAAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKG 375
TL+ + VPA + G+S PA V++ +R+ +A ++GE F +D G
Sbjct: 205 TLSLLGKVPADRLLVTESGISTPADVKRLREARV-NAFLVGEAFMRAEDPG 254


>sp|O75690|KRA58_HUMAN Keratin-associated protein 5-8 OS=Homo
sapiens GN=KRTAP5-8 PE=2 SV=2
Length = 187

Score = 30.8 bits (68), Expect = 5.4
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = -2

Query: 294 CGSTDSIRGGLLHSSWHWCYCRKRFSCLKGNCHC*AGQQSSCQKLSSSPRSCKGC 130
CGS +GG C C K C G C Q S C+ S CK C
Sbjct: 70 CGSCGGSKGGCGSCGCSQCSCYKPCCCSSG-CGSSCCQSSCCKPCCSQSSCCKPC 123


>sp|P22137|CLH_YEAST Clathrin heavy chain OS=Saccharomyces cerevisiae
GN=CHC1 PE=1 SV=1
Length = 1653

Score = 30.8 bits (68), Expect = 5.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1

Query: 394 LAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQK 507
LA+ +VYLG+ + D K +++ K + D C E+K
Sbjct: 1233 LASTLVYLGDYQAAVDTARKASNIKVWKLVNDACIEKK 1270


>sp|P93831|CLF_ARATH Histone-lysine N-methyltransferase CLF
OS=Arabidopsis thaliana GN=CLF PE=1 SV=2
Length = 902

Score = 30.4 bits (67), Expect = 7.1
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Frame = -2

Query: 357 SKWFTKNGSIINS---RAARFFYRCGSTDSIRGGLLHSSWHWCYCRKRFSCLKG------ 205
S F NG+++N+ R +RF R G ++ +++H RKR + K
Sbjct: 595 SSKFDINGNMVNNQVRRRSRFLRRRGKVRRLKYTWKSAAYH--SIRKRITEKKDQPCRQF 652

Query: 204 ---NCHC*AGQQ-------SSCQKLSSSPRSCKGCFFMCARLLGKARLLQIP 79
NC G++ + C+K P+SCK F C + R Q P
Sbjct: 653 NPCNCKIACGKECPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCP 704


>sp|Q8DKH2|ACSA_THEEB Acetyl-coenzyme A synthetase
OS=Thermosynechococcus elongatus (strain BP-1) GN=acsA
PE=3 SV=1
Length = 656

Score = 30.0 bits (66), Expect = 9.1
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3

Query: 113 GSLVRPGSSRFLSFLPKTKSGSI 45
G+L RP RF LPKT+SG I
Sbjct: 600 GALARPAEIRFTDALPKTRSGKI 622


tr_hit_id A9SSB4
Definition tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 93
Score (bit) 141.0
E-value 3.0e-32
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956016|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_K05, 5'
(595 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment) OS=Physcomit... 141 3e-32
tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment) OS=Physcomit... 138 2e-31
tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family (... 130 6e-29
tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g4040... 130 6e-29
tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_1... 126 1e-27
tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g5614... 126 1e-27
tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis... 125 2e-27
tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza... 124 3e-27
tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert seque... 124 5e-27
tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza... 124 5e-27
tr|A7Q3Q9|A7Q3Q9_VITVI Chromosome chr13 scaffold_48, whole genom... 122 2e-26
tr|A3B515|A3B515_ORYSJ Putative uncharacterized protein OS=Oryza... 122 2e-26
tr|B6SLM6|B6SLM6_MAIZE Putative uncharacterized protein OS=Zea m... 109 1e-22
tr|Q65WW4|Q65WW4_ORYSJ Putative uncharacterized protein P0486C01... 39 0.29
tr|B8AZC2|B8AZC2_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.29
tr|A4LTT0|A4LTT0_BURPS Putative uncharacterized protein OS=Burkh... 36 1.4
tr|B6P254|B6P254_BRAFL Putative uncharacterized protein (Fragmen... 35 3.2
tr|Q6C5E7|Q6C5E7_YARLI YALI0E18700p OS=Yarrowia lipolytica GN=YA... 35 3.2
tr|B1J9X1|B1J9X1_PSEPW Putative uncharacterized protein OS=Pseud... 35 4.3
tr|Q7RNI8|Q7RNI8_PLAYO Porphobilinogen deaminase, putative OS=Pl... 35 4.3
tr|Q030W0|Q030W0_LACLS Isocitrate dehydrogenase [NADP] OS=Lactoc... 34 5.6
tr|A2RIZ1|A2RIZ1_LACLM Isocitrate dehydrogenase [NADP] OS=Lactoc... 34 5.6
tr|Q1YDW4|Q1YDW4_MOBAS Possible regulatory protein, MarR family ... 34 5.6
tr|B1YAL3|B1YAL3_THENV Carbamoyl-phosphate synthase, large subun... 34 5.6
tr|A1RTS0|A1RTS0_PYRIL Carbamoyl-phosphate synthase large subuni... 34 5.6
tr|A4HF65|A4HF65_LEIBR Putative uncharacterized protein OS=Leish... 34 7.2
tr|Q08SN7|Q08SN7_STIAU Putative uncharacterized protein OS=Stigm... 34 7.3
tr|Q8I5V2|Q8I5V2_PLAF7 Putative uncharacterized protein OS=Plasm... 34 7.3
tr|Q4Q8X1|Q4Q8X1_LEIMA Putative uncharacterized protein OS=Leish... 33 9.4

>tr|A9SSB4|A9SSB4_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_11257 PE=4 SV=1
Length = 582

Score = 141 bits (355), Expect = 3e-32
Identities = 67/93 (72%), Positives = 80/93 (86%)
Frame = +1

Query: 313 GSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDK 492
GSR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LEL IV+ +RD
Sbjct: 2 GSRVYDATVLGEPVAVGGERNRVWQKLLQARVVYLGEAERVPDPDDKILELGIVRKLRDA 61

Query: 493 CFEQKRPVSLALEAVPCTLQPQLNAYMSKRLSD 591
CFEQ RP+SLAL+A P +LQ L+AYMS RLSD
Sbjct: 62 CFEQARPMSLALDAFPASLQKSLDAYMSNRLSD 94


>tr|A9RY09|A9RY09_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_20837 PE=4 SV=1
Length = 576

Score = 138 bits (348), Expect = 2e-31
Identities = 66/92 (71%), Positives = 78/92 (84%)
Frame = +1

Query: 316 SRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKC 495
SR+YDA+VLGEP AVG ++ RVWQK+L ARVVYLGE+ERVPDPDDK+LE+ IV+ +RD C
Sbjct: 1 SRVYDATVLGEPVAVGGERSRVWQKLLQARVVYLGEAERVPDPDDKILEMGIVRKLRDAC 60

Query: 496 FEQKRPVSLALEAVPCTLQPQLNAYMSKRLSD 591
FEQ RPVSLAL+ P TLQ L+ YMSKRLSD
Sbjct: 61 FEQARPVSLALDIFPVTLQKSLDKYMSKRLSD 92


>tr|Q9SIY5|Q9SIY5_ARATH Chloroplast lumen common protein family
(At2g40400/T3G21.17) OS=Arabidopsis thaliana
GN=At2g40400 PE=2 SV=1
Length = 735

Score = 130 bits (327), Expect = 6e-29
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = +1

Query: 289 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 468
P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE
Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172

Query: 469 IVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585
IV+ +R +C E R +SLALEA P LQ QLN YM KR+
Sbjct: 173 IVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYMDKRM 211


>tr|Q0WVB8|Q0WVB8_ARATH Putative uncharacterized protein At2g40400
OS=Arabidopsis thaliana GN=At2g40400 PE=2 SV=1
Length = 735

Score = 130 bits (327), Expect = 6e-29
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = +1

Query: 289 PASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARVVYLGESERVPDPDDKVLELE 468
P E+ SRIYDASVLGEP AVGKDK RVW+K+L AR+VYLGE+E+VP DDKVLELE
Sbjct: 113 PVEKEEAITSRIYDASVLGEPMAVGKDKKRVWEKLLNARIVYLGEAEQVPTRDDKVLELE 172

Query: 469 IVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585
IV+ +R +C E R +SLALEA P LQ QLN YM KR+
Sbjct: 173 IVRNLRKRCIESDRQLSLALEAFPLDLQEQLNQYMDKRM 211


>tr|Q9LYM7|Q9LYM7_ARATH Putative uncharacterized protein F18O21_100
OS=Arabidopsis thaliana GN=F18O21_100 PE=4 SV=1
Length = 755

Score = 126 bits (316), Expect = 1e-27
Identities = 65/119 (54%), Positives = 83/119 (69%)
Frame = +1

Query: 229 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 408
AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV
Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161

Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585
VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+ALEA P LQ QLN YM KR+
Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYMDKRM 220


>tr|Q8RWG3|Q8RWG3_ARATH Putative uncharacterized protein At3g56140
(At3g56140) OS=Arabidopsis thaliana GN=At3g56140 PE=2
SV=1
Length = 745

Score = 126 bits (316), Expect = 1e-27
Identities = 65/119 (54%), Positives = 83/119 (69%)
Frame = +1

Query: 229 AAVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKDKGRVWQKVLAARV 408
AA P PA + P P + E+ SRIYDA+ +GEP A+GKDK +VW+K+L ARV
Sbjct: 106 AAPPPPPATTTPSPPP----PVNKEETITSRIYDATAIGEPMAMGKDKKKVWEKLLNARV 161

Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585
VYLGE+E+VP DDK LELEIV+ +R +C E +R +S+ALEA P LQ QLN YM KR+
Sbjct: 162 VYLGEAEQVPTKDDKELELEIVRNLRKRCVESERQISVALEAFPLDLQDQLNQYMDKRM 220


>tr|A5BZ40|A5BZ40_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_028159 PE=4 SV=1
Length = 749

Score = 125 bits (313), Expect = 2e-27
Identities = 66/125 (52%), Positives = 85/125 (68%), Gaps = 6/125 (4%)
Frame = +1

Query: 229 AAVAPVPAGMKEASPDGVSA--PASVEKPSG----SRIYDASVLGEPFAVGKDKGRVWQK 390
+ VA G + P S PA+ EK SRIYDA+V+GEP A+GKDK +VW+K
Sbjct: 101 SVVARAEEGTEAVMPAAASGTVPAAAEKKMEEAIVSRIYDATVIGEPMALGKDKRKVWEK 160

Query: 391 VLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAY 570
++ AR+VYLGE+E+VP DD+ LELEIVK +R +C E +RP+SLALEA PC LQ LN Y
Sbjct: 161 LMNARIVYLGEAEQVPIRDDRELELEIVKKLRKRCAENERPLSLALEAFPCNLQEXLNQY 220

Query: 571 MSKRL 585
M R+
Sbjct: 221 MDYRI 225


>tr|A2ZZ58|A2ZZ58_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003830 PE=4 SV=1
Length = 822

Score = 124 bits (312), Expect = 3e-27
Identities = 70/126 (55%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
Frame = +1

Query: 220 KTLAAVAPVPAGMKEASPDGVSAPASVEKPSG---SRIYDASVLGEPFAVGKD-KGRVWQ 387
K A+ AP PA A+P AP S +P SR+YDA+V+GEP AVGKD + RVW+
Sbjct: 182 KQAASPAPGPA----AAP----APTSAGEPEAEALSRVYDATVIGEPQAVGKDARRRVWE 233

Query: 388 KVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNA 567
K++AARVVYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN
Sbjct: 234 KLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQ 293

Query: 568 YMSKRL 585
+M +RL
Sbjct: 294 FMDRRL 299


>tr|Q941X4|Q941X4_ORYSJ cDNA clone:001-201-E07, full insert sequence
OS=Oryza sativa subsp. japonica GN=B1088C09.2 PE=2 SV=1
Length = 723

Score = 124 bits (310), Expect = 5e-27
Identities = 69/126 (54%), Positives = 89/126 (70%), Gaps = 4/126 (3%)
Frame = +1

Query: 220 KTLAAVAPVPAGMKEASPDGVSAPASVEKPSG---SRIYDASVLGEPFAVGKD-KGRVWQ 387
K A+ AP PA A+P AP S +P SR+YDA+V+GEP AVGKD + RVW+
Sbjct: 76 KQAASPAPGPA----AAP----APTSAGEPEAEALSRVYDATVIGEPQAVGKDARRRVWE 127

Query: 388 KVLAARVVYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNA 567
K++AARVVYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN
Sbjct: 128 KLMAARVVYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQ 187

Query: 568 YMSKRL 585
+M +R+
Sbjct: 188 FMDRRI 193


>tr|B8ABM2|B8ABM2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04278 PE=4 SV=1
Length = 723

Score = 124 bits (310), Expect = 5e-27
Identities = 63/119 (52%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Frame = +1

Query: 232 AVAPVPAGMKEASPDGVSAPASVEKPSGSRIYDASVLGEPFAVGKD-KGRVWQKVLAARV 408
A +P P + +P P E + SR+YDA+V+GEP AVGKD + RVW+K++AARV
Sbjct: 78 AASPAPGPAEAPAPTSAGEP---EAEALSRVYDATVIGEPQAVGKDARRRVWEKLMAARV 134

Query: 409 VYLGESERVPDPDDKVLELEIVKTIRDKCFEQKRPVSLALEAVPCTLQPQLNAYMSKRL 585
VYLGE+E VPD DD+VLELE+V+ + +C E R +SLALEA PC LQ QLN +M +R+
Sbjct: 135 VYLGEAELVPDRDDRVLELEVVRKLAARCAEAGRSISLALEAFPCNLQEQLNQFMDRRI 193