DK956022 |
Clone id |
TST39A01NGRL0024_K11 |
Library |
TST39 |
Length |
559 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_K11. 5' end sequence. |
Accession |
DK956022 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL154Contig1 |
Sequence |
GAGGGATCGAGGGCGGGCTTCGGGGTTGCTGCAGAAACCCTAGTCGAAGGTAAGCTTGAG CTTTGGGTCTGTTAGCGATGGGGAGGGTCATCAGAGGCCAAAGGAAGGGAGCAGGCTCGA TCTTTAGAGCCCACACACACAGGCGCAAGGGCCCTGCTCGTTTTAGATCTCTAGACTACT CAGAAAGTAATGGGTACATAAAGGGTGTCGTCTCCGACATTGTTCACGATTCTGGCAGAG GAGCACCTCTCTGCAAGGTGACCTTCCGCCACCCCTTCCGCTTTAAACACCAGAATGAGC GCTTCATTGCTGCAGAGGGTATGTACTCTGGCCAGTTTGTTTACTGTGGAAAGAAGGCAA CCCTGTCCATTGGCAATGTTCTTCCTCTCAAGTCGGTGCCGGAGGGCGCTGTGGTTTGTA ATGTCGAACAGCGAGTGGGGGATCGTGGCTCTTTTGCTAGAGCTTCTGGTGACTATGTAA TCGTTGTCAGCCATAATCCGGATAACAACACCACACGTATCAAGCTTCCCTCTGGAGCCA AGAAGATTGTGCCAAGTGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P29766 |
Definition |
sp|P29766|RL8_SOLLC 60S ribosomal protein L8 OS=Solanum lycopersicum |
Align length |
157 |
Score (bit) |
274.0 |
E-value |
2.0e-73 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RZ45 |
Definition |
tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
157 |
Score (bit) |
291.0 |
E-value |
2.0e-77 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956022|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_K11, 5' (559 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella paten... 291 2e-77 tr|Q2QNF3|Q2QNF3_ORYSJ Os12g0567700 protein OS=Oryza sativa subs... 278 2e-73 tr|A2ZLS7|A2ZLS7_ORYSI Putative uncharacterized protein OS=Oryza... 278 2e-73 tr|B6TGT0|B6TGT0_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 276 5e-73 tr|B4F9R4|B4F9R4_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 276 5e-73 tr|A7QDZ9|A7QDZ9_VITVI Chromosome chr4 scaffold_83, whole genome... 275 9e-73 tr|B6TIQ9|B6TIQ9_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2... 274 2e-72 tr|Q2XTD6|Q2XTD6_SOLTU Ribosomal protein L2-like OS=Solanum tube... 274 3e-72 tr|A7P133|A7P133_VITVI Chromosome chr19 scaffold_4, whole genome... 273 3e-72 tr|A5AW13|A5AW13_VITVI Putative uncharacterized protein (Chromos... 273 6e-72 tr|A9PBZ5|A9PBZ5_POPTR Putative uncharacterized protein OS=Popul... 271 2e-71 tr|A9PCT0|A9PCT0_POPTR Putative uncharacterized protein OS=Popul... 270 5e-71 tr|Q9FEZ7|Q9FEZ7_SOYBN Ribosomal protein L2 OS=Glycine max GN=rp... 265 9e-70 tr|Q6EMI5|Q6EMI5_BRAJU Ribosomal protein L2 (Fragment) OS=Brassi... 262 8e-69 tr|B4FJS6|B4FJS6_MAIZE Putative uncharacterized protein OS=Zea m... 252 1e-65 tr|Q2HRD6|Q2HRD6_MEDTR Translation protein SH3-like OS=Medicago ... 246 8e-64 tr|B6RB82|B6RB82_HALDI Ribosomal protein l OS=Haliotis discus di... 235 1e-60 tr|B2YI29|B2YI29_9BILA Putative 60S ribosomal protein RPL8 (Frag... 231 3e-59 tr|Q56FH5|Q56FH5_LYSTE Ribosomal protein L8 OS=Lysiphlebus testa... 230 3e-59 tr|Q5I1D2|Q5I1D2_GECJA GekBS074P OS=Gecko japonicus PE=2 SV=1 229 1e-58 tr|A2I3X6|A2I3X6_MACHI Putative ribosomal protein L8e OS=Maconel... 228 1e-58 tr|A8UG01|A8UG01_9ANNE Ribosomal protein rpl8 OS=Eurythoe compla... 228 2e-58 tr|B5KFK9|B5KFK9_TAEGU Putative ribosomal protein L8 OS=Taeniopy... 228 2e-58 tr|B5FXQ0|B5FXQ0_TAEGU Putative ribosomal protein L8 OS=Taeniopy... 228 2e-58 tr|B5FXP9|B5FXP9_TAEGU Putative ribosomal protein L8 (Fragment) ... 228 2e-58 tr|B5FXP8|B5FXP8_TAEGU Putative ribosomal protein L8 (Fragment) ... 228 2e-58 tr|B4KYM8|B4KYM8_DROMO GI12472 OS=Drosophila mojavensis GN=GI124... 227 3e-58 tr|A8IVK1|A8IVK1_CHLRE Ribosomal protein L8 OS=Chlamydomonas rei... 227 4e-58 tr|Q29FA8|Q29FA8_DROPS GA11728 OS=Drosophila pseudoobscura pseud... 227 4e-58 tr|B4N386|B4N386_DROWI GK12506 OS=Drosophila willistoni GN=GK125... 227 4e-58
>tr|A9RZ45|A9RZ45_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_161945 PE=4 SV=1 Length = 260
Score = 291 bits (744), Expect = 2e-77 Identities = 139/157 (88%), Positives = 149/157 (94%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGSIFR+HTHRRKGPA+FRSLDY+E NGYIKGVVS++VHDSGRGAPLCKVTF Sbjct: 4 VIRAQRKGAGSIFRSHTHRRKGPAQFRSLDYAERNGYIKGVVSEVVHDSGRGAPLCKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFRFK Q ERFIAAEGMYSGQFVYCGKKATLSIGNVLPL+SVPEGAVVCNVE R+GDR Sbjct: 64 RHPFRFKRQKERFIAAEGMYSGQFVYCGKKATLSIGNVLPLRSVPEGAVVCNVEHRMGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G+FARASGDY IVVSHN D+ TTRIKLPSGAKK+VPS Sbjct: 124 GAFARASGDYAIVVSHNVDSGTTRIKLPSGAKKVVPS 160
>tr|Q2QNF3|Q2QNF3_ORYSJ Os12g0567700 protein OS=Oryza sativa subsp. japonica GN=Os12g0567700 PE=4 SV=1 Length = 261
Score = 278 bits (710), Expect = 2e-73 Identities = 128/157 (81%), Positives = 144/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+DI+HD GRGAPL KVTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCG++ATLSIGNVLP++SVPEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IV+SHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPS 160
>tr|A2ZLS7|A2ZLS7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_38771 PE=4 SV=1 Length = 261
Score = 278 bits (710), Expect = 2e-73 Identities = 128/157 (81%), Positives = 144/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+DI+HD GRGAPL KVTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCG++ATLSIGNVLP++SVPEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IV+SHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPS 160
>tr|B6TGT0|B6TGT0_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 261
Score = 276 bits (706), Expect = 5e-73 Identities = 126/157 (80%), Positives = 143/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+D++HD GRGAPL KVTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCG++ATLSIGNVLPL+ +PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IV+SHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPS 160
>tr|B4F9R4|B4F9R4_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 260
Score = 276 bits (706), Expect = 5e-73 Identities = 126/157 (80%), Positives = 143/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+D++HD GRGAPL KVTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCG++ATLSIGNVLPL+ +PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IV+SHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPS 160
>tr|A7QDZ9|A7QDZ9_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036802001 PE=4 SV=1 Length = 260
Score = 275 bits (704), Expect = 9e-73 Identities = 127/157 (80%), Positives = 143/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV++I+HD GRGAPL +VTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCGKKATL +GNVLPL+S+PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLIVGNVLPLRSIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IVVSHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVVSHNPDNGTSRIKLPSGAKKIVPS 160
>tr|B6TIQ9|B6TIQ9_MAIZE 60S ribosomal protein L2 OS=Zea mays PE=2 SV=1 Length = 261
Score = 274 bits (701), Expect = 2e-72 Identities = 125/157 (79%), Positives = 142/157 (90%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VI QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+D++HD GRGAPL KVTF Sbjct: 4 VIHAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAKVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCG++ATLSIGNVLPL+ +PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGRRATLSIGNVLPLRGIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IV+SHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYAIVISHNPDNGTSRIKLPSGAKKIVPS 160
>tr|Q2XTD6|Q2XTD6_SOLTU Ribosomal protein L2-like OS=Solanum tuberosum PE=2 SV=1 Length = 261
Score = 274 bits (700), Expect = 3e-72 Identities = 122/157 (77%), Positives = 143/157 (91%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFR+LD+ E NGY+KGV+++++HD GRGAPL +VTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRTLDFGERNGYLKGVITEVIHDPGRGAPLARVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCGKKATL +GNVLPL+S+PEGAVVCNVE +VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKATLMVGNVLPLRSIPEGAVVCNVEHKVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FAR SGDY IV+SHNPDN TTR+KLPSGAKKIVPS Sbjct: 124 GVFARCSGDYAIVISHNPDNGTTRVKLPSGAKKIVPS 160
>tr|A7P133|A7P133_VITVI Chromosome chr19 scaffold_4, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00027466001 PE=4 SV=1 Length = 260
Score = 273 bits (699), Expect = 3e-72 Identities = 125/157 (79%), Positives = 142/157 (90%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV+DI+HD GRGAPL +VTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLARVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCGKKA L +GNVLP++S+PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IVVSHNPDN T+RIKLPSGAKKI+PS Sbjct: 124 GVFARASGDYAIVVSHNPDNGTSRIKLPSGAKKIIPS 160
>tr|A5AW13|A5AW13_VITVI Putative uncharacterized protein (Chromosome chr12 scaffold_36, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00026101001 PE=4 SV=1 Length = 260
Score = 273 bits (697), Expect = 6e-72 Identities = 126/157 (80%), Positives = 142/157 (90%) Frame = +3
Query: 87 VIRGQRKGAGSIFRAHTHRRKGPARFRSLDYSESNGYIKGVVSDIVHDSGRGAPLCKVTF 266 VIR QRKGAGS+F++HTH RKGPARFRSLD+ E NGY+KGVV++I+HD GRGAPL +VTF Sbjct: 4 VIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLARVTF 63
Query: 267 RHPFRFKHQNERFIAAEGMYSGQFVYCGKKATLSIGNVLPLKSVPEGAVVCNVEQRVGDR 446 RHPFR+KHQ E F+AAEGMY+GQFVYCGKKA L +GNVLPL+S+PEGAVVCNVE VGDR Sbjct: 64 RHPFRYKHQKELFVAAEGMYTGQFVYCGKKANLVVGNVLPLRSIPEGAVVCNVEHHVGDR 123
Query: 447 GSFARASGDYVIVVSHNPDNNTTRIKLPSGAKKIVPS 557 G FARASGDY IVVSHNPDN T+RIKLPSGAKKIVPS Sbjct: 124 GVFARASGDYSIVVSHNPDNGTSRIKLPSGAKKIVPS 160
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