NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
DK956049
Clone id TST39A01NGRL0024_L14
Library
Length 590
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_L14. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID -
Sequence 
CAGTACACTAGGGCCGCTTGCCCGCAAAGAACTGCTGTGAAAATGGTCTCCACCACCCTC
TCCTCCTCCTTCTGCGGGCCGGCTGTGCTCAAGCAGCAGGCCAATGAGCTGTCTCGCAAG
GTTGGCGCCAGTGAGGCGCGTGTGCAGATGAAGACCAGTAAGGGCTCCAGCAGCAGCATC
TGGTATGGGCCGGACCGCCCCCTTTACCTGGGCCCGTTCTCCGGTTTGCCCCCTTCGTAC
CTCACAGGTGAATTCCCCGGGGACTACGGCTGGGACACTGCAGGCCTGTCCGCCGACCCC
GAGACCTTCGCGAAGAACCGGGAGCTGGAGGTCATCCACGCTCGGTGGGCCATGTTGGGC
GCCCTGGGCTGCGTCACCCCTGAGCTGTTGGCCAAGAACGGCGTCCCCTTCGGAGAGGCT
GTGTGGTTCAAGGCGGGGTCGCAGATCTTCAGCGAAGGCGGGCTGGACTACCTGGGAAAT
CCCAGCCTGGTGCATGCGCAGAGCATCCTCGCGATCTGGGCCTGTCAGGTCATCCTCATG
GGCGCCGTGGAGGGGTACAGAGTGGCTGGTGGTCCGCTGGGCGAGGTGTC
■■Homology search results ■■ -
sp_hit_id P15195
Definition sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum
Align length 182
Score (bit) 310.0
E-value 3.0e-84
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956049|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_L14, 5'
         (590 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 memb...   310   3e-84
sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplas...   295   2e-79
sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16, chlorop...   283   3e-76
sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I, chl...   283   3e-76
sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151, chloro...   283   5e-76
sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C, chlorop...   281   1e-75
sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25, chlorop...   281   1e-75
sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50, chlorop...   281   2e-75
sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplast...   281   2e-75
sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R, chloro...   281   2e-75
sp|P12328|CB21_LEMGI Chlorophyll a-b binding protein of LHCII ty...   281   2e-75
sp|P15194|CB2B_PINSY Chlorophyll a-b binding protein type 2 memb...   280   3e-75
sp|P27497|CB29_MAIZE Chlorophyll a-b binding protein M9, chlorop...   280   4e-75
sp|P12470|CB25_NICPL Chlorophyll a-b binding protein E, chloropl...   280   4e-75
sp|P27495|CB24_TOBAC Chlorophyll a-b binding protein 40, chlorop...   280   4e-75
sp|P04784|CB21_WHEAT Chlorophyll a-b binding protein, chloroplas...   280   4e-75
sp|P15193|CB2A_PINSY Chlorophyll a-b binding protein type 2 memb...   280   5e-75
sp|P14278|CB24_SOLLC Chlorophyll a-b binding protein 4, chloropl...   280   5e-75
sp|P27491|CB27_TOBAC Chlorophyll a-b binding protein 7, chloropl...   279   7e-75
sp|P06671|CB22_MAIZE Chlorophyll a-b binding protein, chloroplas...   279   7e-75
sp|P07370|CB2B_SOLLC Chlorophyll a-b binding protein 1B, chlorop...   278   1e-74
sp|P24006|CB2A_PYRPY Chlorophyll a-b binding protein 1A, chlorop...   278   1e-74
sp|P12333|CB2A_SPIOL Chlorophyll a-b binding protein, chloroplas...   278   1e-74
sp|P27493|CB22_TOBAC Chlorophyll a-b binding protein 21, chlorop...   278   2e-74
sp|P12329|CB21_MAIZE Chlorophyll a-b binding protein 1, chloropl...   277   2e-74
sp|P04779|CB21_PETSP Chlorophyll a-b binding protein 13, chlorop...   277   3e-74
sp|P04783|CB25_PETSP Chlorophyll a-b binding protein 91R, chloro...   276   4e-74
sp|P12469|CB23_NICPL Chlorophyll a-b binding protein C, chloropl...   276   7e-74
sp|Q10HD0|CB23_ORYSJ Chlorophyll a-b binding protein, chloroplas...   275   9e-74
sp|A2XJ35|CB23_ORYSI Chlorophyll a-b binding protein, chloroplas...   275   9e-74

>sp|P15195|CB23_POLMU Chlorophyll a-b binding protein type 1 member
           F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3
           SV=1
          Length = 265

 Score =  310 bits (794), Expect = 3e-84
 Identities = 154/182 (84%), Positives = 162/182 (89%), Gaps = 2/182 (1%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMKT--SKGSSSSIWYGPDRPLYLGPFS 222
           +  L+S+F G  +  +  NELSRKVGA EARVQM    SK  S SIWYG DRPLYLGPFS
Sbjct: 5   TAALTSTFSGQQL--KPVNELSRKVGAGEARVQMMAPKSKAPSGSIWYGSDRPLYLGPFS 62

Query: 223 GLPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 402
           G PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH+RWAMLGALGCVTPELLAKNG
Sbjct: 63  GSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPELLAKNG 122

Query: 403 VPFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 582
           V FGEAVWFKAGSQIF+EGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG
Sbjct: 123 VKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 182

Query: 583 EV 588
           EV
Sbjct: 183 EV 184


>sp|P12332|CB21_SILPR Chlorophyll a-b binding protein, chloroplastic
           (Fragment) OS=Silene pratensis PE=2 SV=2
          Length = 205

 Score =  295 bits (754), Expect = 2e-79
 Identities = 146/180 (81%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMK-TSKGSSSSIWYGPDRPLYLGPFSG 225
           ST   S+F G  +LK Q NEL RKVG +  RV M+ T K +  SIWYGPDRP YLGPFS 
Sbjct: 4   STIQQSAFAGQTLLKPQ-NELVRKVGGNGGRVSMRRTIKSAPESIWYGPDRPKYLGPFSE 62

Query: 226 LPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 405
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLAKNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGV 122

Query: 406 PFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 585
            FGEAVWFKAGSQIF EGGLDYLGNP+LVHAQSILAIWACQV+LMGAVEGYRV GGPLGE
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGE 182


>sp|P27492|CB21_TOBAC Chlorophyll a-b binding protein 16,
           chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1
          Length = 266

 Score =  283 bits (725), Expect = 3e-76
 Identities = 141/181 (77%), Positives = 150/181 (82%), Gaps = 1/181 (0%)
 Frame = +1

Query: 49  STTLSSSFCGPAV-LKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSG 225
           +T LSS F G AV L   ++E++     +  +   K    SS S WYGPDR  YLGPFSG
Sbjct: 5   TTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSG 64

Query: 226 LPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 405
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGV
Sbjct: 65  ESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 124

Query: 406 PFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 585
            FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGE
Sbjct: 125 KFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGE 184

Query: 586 V 588
           V
Sbjct: 185 V 185


>sp|P10049|CB21_PINTH Chlorophyll a-b binding protein type I,
           chloroplastic OS=Pinus thunbergii PE=2 SV=1
          Length = 266

 Score =  283 bits (725), Expect = 3e-76
 Identities = 135/180 (75%), Positives = 151/180 (83%), Gaps = 1/180 (0%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMK-TSKGSSSSIWYGPDRPLYLGPFSG 225
           S   SSS  G  +L+ Q NEL +KVG ++AR+ M+ T + +  SIWYGPDRP YLGPFS 
Sbjct: 5   SAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSE 64

Query: 226 LPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 405
             PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIH RWAMLGALGCV PELLAKNG+
Sbjct: 65  GTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGL 124

Query: 406 PFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 585
            FGEAVWFKAG+QIFSEGGLDY GNP+L+HAQSILAIWACQV+LMG +EGYRV GG LGE
Sbjct: 125 KFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGE 184


>sp|P27518|CB21_GOSHI Chlorophyll a-b binding protein 151,
           chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2
          Length = 265

 Score =  283 bits (724), Expect = 5e-76
 Identities = 141/181 (77%), Positives = 152/181 (83%), Gaps = 2/181 (1%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGA-SEARVQMK-TSKGSSSSIWYGPDRPLYLGPFS 222
           S    S+F G   LKQ +NEL  K+GA    RV M+ T K + +SIWYGPDRP YLGPFS
Sbjct: 4   SAIQQSAFAGQTALKQ-SNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGPFS 62

Query: 223 GLPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 402
              PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PE+L+KNG
Sbjct: 63  DQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNG 122

Query: 403 VPFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG 582
           V FGEAVWFKAGSQIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG VEGYRV GGPLG
Sbjct: 123 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLG 182

Query: 583 E 585
           E
Sbjct: 183 E 183


>sp|P07369|CB2G_SOLLC Chlorophyll a-b binding protein 3C,
           chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
          Length = 267

 Score =  281 bits (720), Expect = 1e-75
 Identities = 138/177 (77%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
 Frame = +1

Query: 61  SSSFCGPAV-LKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSGLPPS 237
           SS+F G AV L   ++E++     +  +   K    SS S WYGPDR  YLGPFSG  PS
Sbjct: 10  SSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPS 69

Query: 238 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPFGE 417
           YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGV FGE
Sbjct: 70  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129

Query: 418 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYR+AGGPLGEV
Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEV 186


>sp|P04782|CB24_PETSP Chlorophyll a-b binding protein 25,
           chloroplastic OS=Petunia sp. GN=CAB25 PE=3 SV=1
          Length = 266

 Score =  281 bits (720), Expect = 1e-75
 Identities = 138/176 (78%), Positives = 147/176 (83%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSGLPPSY 240
           SSSF G AV    +++++    A+  +   K    SS S WYGPDR  YLGPFSG  PSY
Sbjct: 10  SSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSY 69

Query: 241 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPFGEA 420
           LTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL A+NGV FGEA
Sbjct: 70  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEA 129

Query: 421 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV
Sbjct: 130 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 185


>sp|P27496|CB25_TOBAC Chlorophyll a-b binding protein 50,
           chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1
          Length = 267

 Score =  281 bits (719), Expect = 2e-75
 Identities = 140/177 (79%), Positives = 148/177 (83%), Gaps = 1/177 (0%)
 Frame = +1

Query: 61  SSSFCGPAV-LKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSGLPPS 237
           SSSF G AV L   ++E++     +  +   K    SS S WYGPDR  YLGPFSG  PS
Sbjct: 10  SSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPS 69

Query: 238 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPFGE 417
           YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PELLA+NGV FGE
Sbjct: 70  YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 129

Query: 418 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV
Sbjct: 130 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186


>sp|P20866|CB2_PHYPA Chlorophyll a-b binding protein, chloroplastic
           OS=Physcomitrella patens PE=3 SV=1
          Length = 269

 Score =  281 bits (718), Expect = 2e-75
 Identities = 140/180 (77%), Positives = 155/180 (86%), Gaps = 4/180 (2%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKV-GASEARVQMK---TSKGSSSSIWYGPDRPLYLGPFSGL 228
           S++  G +++K   NELSRKV G  EARV M+   +    S +IWYG DRP +LGPFSG 
Sbjct: 9   STALAGQSLVKP-VNELSRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGE 67

Query: 229 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVP 408
            PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV 
Sbjct: 68  TPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVK 127

Query: 409 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV
Sbjct: 128 FGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 187



 Score = 30.8 bits (68), Expect = 5.3
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +1

Query: 253 FPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNG 402
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 240


>sp|P04781|CB23_PETSP Chlorophyll a-b binding protein 22R,
           chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1
          Length = 267

 Score =  281 bits (718), Expect = 2e-75
 Identities = 140/186 (75%), Positives = 152/186 (81%), Gaps = 4/186 (2%)
 Frame = +1

Query: 43  MVSTTL---SSSFCGPAV-LKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYL 210
           M +TT+   SSSF G AV L   ++E++     +  +   K    SSSS WYGPDR  YL
Sbjct: 1   MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60

Query: 211 GPFSGLPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 390
           GPFSG  PSYLTGEFP DYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL 
Sbjct: 61  GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 391 AKNGVPFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 570
           A+NG+ FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAG
Sbjct: 121 ARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAG 180

Query: 571 GPLGEV 588
           GPLGEV
Sbjct: 181 GPLGEV 186
tr_hit_id A9TL35
Definition tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 185
Score (bit) 300.0
E-value 5.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DK956049|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_L14, 5'
         (590 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella paten...   300   5e-80
tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella paten...   295   1e-78
tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella paten...   294   3e-78
tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding ...   293   6e-78
tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella paten...   292   8e-78
tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus ...   292   1e-77
tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella paten...   291   2e-77
tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella paten...   290   3e-77
tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding ...   290   5e-77
tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein OS=Amaran...   289   7e-77
tr|A9NPD6|A9NPD6_PICSI Putative uncharacterized protein OS=Picea...   289   7e-77
tr|A9NLB8|A9NLB8_PICSI Putative uncharacterized protein OS=Picea...   289   9e-77
tr|Q1EP00|Q1EP00_MUSAC Chlorophyll A-B binding protein (CAB), pu...   288   1e-76
tr|A9NMJ8|A9NMJ8_PICSI Putative uncharacterized protein OS=Picea...   288   1e-76
tr|Q5CCK8|Q5CCK8_ADICA Chlorophyll a/b-binding protein OS=Adiant...   288   2e-76
tr|Q40956|Q40956_PINPA Type 2 light-harvesting chlorophyll a/b-b...   288   2e-76
tr|A9RJS3|A9RJS3_PHYPA Predicted protein OS=Physcomitrella paten...   287   3e-76
tr|A9NP21|A9NP21_PICSI Putative uncharacterized protein OS=Picea...   287   3e-76
tr|A9NL12|A9NL12_PICSI Putative uncharacterized protein OS=Picea...   287   3e-76
tr|Q9SXW8|Q9SXW8_PHYPA Chlorophyll a/b-binding protein OS=Physco...   287   4e-76
tr|A9T769|A9T769_PHYPA Predicted protein OS=Physcomitrella paten...   287   4e-76
tr|O64447|O64447_NICSY Light harvesting chlorophyll a/b-binding ...   286   5e-76
tr|A9S6F4|A9S6F4_PHYPA Predicted protein OS=Physcomitrella paten...   286   5e-76
tr|B8LPT5|B8LPT5_PICSI Putative uncharacterized protein OS=Picea...   286   6e-76
tr|A9RBQ3|A9RBQ3_PHYPA Predicted protein OS=Physcomitrella paten...   285   1e-75
tr|Q19UF9|Q19UF9_9MAGN Chloroplast chlorophyll a/b binding prote...   285   2e-75
tr|A9NLD5|A9NLD5_PICSI Putative uncharacterized protein OS=Picea...   284   2e-75
tr|Q9SWE9|Q9SWE9_9CARY Chlorophyll a/b binding protein OS=Rumex ...   284   3e-75
tr|Q93XK4|Q93XK4_PINCO Chlorophyll a/b binding protein OS=Pinus ...   284   3e-75
tr|Q84U94|Q84U94_CITLI Chlorophyll a/b-binding protein (Fragment...   284   3e-75

>tr|A9TL35|A9TL35_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108362 PE=4 SV=1
          Length = 263

 Score =  300 bits (767), Expect = 5e-80
 Identities = 153/185 (82%), Positives = 161/185 (87%)
 Frame = +1

Query: 34  AVKMVSTTLSSSFCGPAVLKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLG 213
           A  M STTL+    G ++LK   NELSRKVG SEARV M+ S GS S IWYG DRP +LG
Sbjct: 4   ATAMHSTTLA----GQSLLKP-VNELSRKVGTSEARVSMRKSSGSDS-IWYGADRPKFLG 57

Query: 214 PFSGLPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLA 393
           PFSG  PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLA
Sbjct: 58  PFSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLA 117

Query: 394 KNGVPFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 573
           KNGV FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG
Sbjct: 118 KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGG 177

Query: 574 PLGEV 588
           PLGEV
Sbjct: 178 PLGEV 182


>tr|A9RT62|A9RT62_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_105126 PE=4 SV=1
          Length = 265

 Score =  295 bits (756), Expect = 1e-78
 Identities = 150/186 (80%), Positives = 163/186 (87%), Gaps = 1/186 (0%)
 Frame = +1

Query: 34  AVKMVSTTLSSSFCGPAVLKQQANELSRKVGASEARVQMK-TSKGSSSSIWYGPDRPLYL 210
           A  M STTL+    G ++LK   NELSRKVG+SEARV M+ T K +S SIWYG DRP YL
Sbjct: 4   ATAMHSTTLA----GQSLLKP-VNELSRKVGSSEARVTMRRTVKSTSDSIWYGADRPKYL 58

Query: 211 GPFSGLPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELL 390
           GPFSG  PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELL
Sbjct: 59  GPFSGETPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELL 118

Query: 391 AKNGVPFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAG 570
           AK+GV FGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QV+LMGAVEGYRVAG
Sbjct: 119 AKSGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMGAVEGYRVAG 178

Query: 571 GPLGEV 588
           GPLGE+
Sbjct: 179 GPLGEI 184


>tr|A9T914|A9T914_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_220036 PE=4 SV=1
          Length = 263

 Score =  294 bits (752), Expect = 3e-78
 Identities = 145/176 (82%), Positives = 158/176 (89%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSGLPPSY 240
           S++  G ++LK   NELSR+VGA+EARV M+ S GS S IWYG DRP +LGPFSG  PSY
Sbjct: 9   STALAGQSLLKP-VNELSRRVGANEARVTMRKSAGSDS-IWYGADRPKFLGPFSGETPSY 66

Query: 241 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPFGEA 420
           L GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV FGEA
Sbjct: 67  LNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEA 126

Query: 421 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           VWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV
Sbjct: 127 VWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 182


>tr|Q765P5|Q765P5_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 2 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb2 PE=4 SV=1
          Length = 267

 Score =  293 bits (749), Expect = 6e-78
 Identities = 145/179 (81%), Positives = 157/179 (87%), Gaps = 3/179 (1%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQMKTS---KGSSSSIWYGPDRPLYLGPFSGLP 231
           S++  G ++LK   NELSRKVG+S+ARV M+ +      S SIWYG DRP YLGPFSG  
Sbjct: 9   STALAGQSLLKP-VNELSRKVGSSQARVTMRRTVNKSAGSDSIWYGADRPKYLGPFSGET 67

Query: 232 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPF 411
           PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAK+GV F
Sbjct: 68  PSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKSGVKF 127

Query: 412 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           GEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV
Sbjct: 128 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 186


>tr|A9RNP2|A9RNP2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_176684 PE=4 SV=1
          Length = 265

 Score =  292 bits (748), Expect = 8e-78
 Identities = 146/177 (82%), Positives = 156/177 (88%), Gaps = 1/177 (0%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQM-KTSKGSSSSIWYGPDRPLYLGPFSGLPPS 237
           S++  G ++LK   NELSRKVG  EAR+ M KT+  SS SIWYG DRP YLGPFSG  PS
Sbjct: 9   STALAGQSLLKP-VNELSRKVGNVEARISMRKTASKSSDSIWYGADRPKYLGPFSGETPS 67

Query: 238 YLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPFGE 417
           YL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV FGE
Sbjct: 68  YLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVKFGE 127

Query: 418 AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           AVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLG+V
Sbjct: 128 AVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGDV 184


>tr|Q00984|Q00984_PINTH Chlorophyll a/b-binding protein OS=Pinus
           thunbergii GN=cab PE=4 SV=1
          Length = 266

 Score =  292 bits (747), Expect = 1e-77
 Identities = 139/180 (77%), Positives = 154/180 (85%), Gaps = 1/180 (0%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMK-TSKGSSSSIWYGPDRPLYLGPFSG 225
           S   SSS  G  +L+ Q NEL +KVG ++AR+ M+ T + +  SIWYGPDRP YLGPFS 
Sbjct: 5   SAIQSSSLAGQTLLRPQQNELVKKVGTAQARITMRRTVRSAPESIWYGPDRPKYLGPFSE 64

Query: 226 LPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 405
             PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGC+ PELLAKNGV
Sbjct: 65  GTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCLFPELLAKNGV 124

Query: 406 PFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 585
            FGEAVWFKAG+QIFSEGGLDYLGNP+L+HAQSILAIWACQV+LMG +EGYRV GGPLGE
Sbjct: 125 KFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGE 184


>tr|A9S6S7|A9S6S7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209208 PE=4 SV=1
          Length = 263

 Score =  291 bits (744), Expect = 2e-77
 Identities = 147/180 (81%), Positives = 155/180 (86%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMKTSKGSSSSIWYGPDRPLYLGPFSGL 228
           + T S++  G   LK   NELSRKVG  +ARV M+ +  SS SIWYG DRP YLGP SG 
Sbjct: 5   TATHSTALAGQTALKS-INELSRKVGNVQARVTMRKAS-SSDSIWYGADRPKYLGPLSGE 62

Query: 229 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVP 408
            PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGCVTPELLAKNGV 
Sbjct: 63  TPSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCVTPELLAKNGVK 122

Query: 409 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYRVAGGPLGEV
Sbjct: 123 FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVILMGAVEGYRVAGGPLGEV 182


>tr|A9RAS2|A9RAS2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155384 PE=4 SV=1
          Length = 267

 Score =  290 bits (743), Expect = 3e-77
 Identities = 144/179 (80%), Positives = 155/179 (86%), Gaps = 3/179 (1%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQMK---TSKGSSSSIWYGPDRPLYLGPFSGLP 231
           S++  G  VLK   NELSRKVG  EARV M+   +    S SIWYG DRP +LGPFSG  
Sbjct: 9   STALAGQGVLKP-VNELSRKVGNVEARVTMRRTVSKSAGSDSIWYGADRPKFLGPFSGET 67

Query: 232 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPF 411
           PSYLTGEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV F
Sbjct: 68  PSYLTGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKF 127

Query: 412 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           GEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQV+LMGAVEGYRVAGGPLGEV
Sbjct: 128 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEV 186


>tr|Q765P6|Q765P6_PHYPA Light-harvesting chlorophyll a/b-binding
           protein 1 (Predicted protein) OS=Physcomitrella patens
           subsp. patens GN=PpLhcb1 PE=4 SV=1
          Length = 267

 Score =  290 bits (741), Expect = 5e-77
 Identities = 144/179 (80%), Positives = 157/179 (87%), Gaps = 3/179 (1%)
 Frame = +1

Query: 61  SSSFCGPAVLKQQANELSRKVGASEARVQMKTSKGSSS---SIWYGPDRPLYLGPFSGLP 231
           S++  G A+L Q ANEL RKVG S+ARV M+ +   SS   SIWYG DRP +LGPFSG  
Sbjct: 9   STALAGQALL-QPANELVRKVGTSQARVTMRKTVSKSSGSDSIWYGADRPKFLGPFSGET 67

Query: 232 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGVPF 411
           PSYL GEF GDYGWDTAGLS+DPETFA+NRELEVIHARWAMLGALGC+TPELLAK+GV F
Sbjct: 68  PSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKF 127

Query: 412 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEV 588
           GEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLG+V
Sbjct: 128 GEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGDV 186


>tr|Q38713|Q38713_AMAHP Chlorophyll a/b binding protein
           OS=Amaranthus hypochondriacus GN=Lhcb2*Ah1 PE=4 SV=1
          Length = 264

 Score =  289 bits (740), Expect = 7e-77
 Identities = 140/180 (77%), Positives = 153/180 (85%), Gaps = 1/180 (0%)
 Frame = +1

Query: 49  STTLSSSFCGPAVLKQQANELSRKVGASEARVQMK-TSKGSSSSIWYGPDRPLYLGPFSG 225
           ST   S+F G  +LKQQ NEL RKVG +  R  M+ T K +  SIWYGPDRP YLGPFS 
Sbjct: 4   STIQQSAFVGQTLLKQQ-NELVRKVGGNGGRFSMRRTVKSAPQSIWYGPDRPKYLGPFSE 62

Query: 226 LPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGALGCVTPELLAKNGV 405
             PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH+RWAMLGALGCV PE+L+KNGV
Sbjct: 63  QTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEILSKNGV 122

Query: 406 PFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGE 585
            FGEAVWFKAGSQIF EGGLDYLGNP+L+HAQSILAIWACQV+LMG +EGYRV GGPLGE
Sbjct: 123 KFGEAVWFKAGSQIFQEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGE 182