DK956065 |
Clone id |
TST39A01NGRL0024_M07 |
Library |
TST39 |
Length |
574 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_M07. 5' end sequence. |
Accession |
DK956065 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL3559Contig1 |
Sequence |
TTCTGCGGATCAAGGGTCCCCCGTATCTCTTTCAATTTTCAGGTAGTCGACATAGCCGTC TTCTTCAGAAATACACAGCCACCGTCGGCAGATATTCAGTAGGTTTAGTGGATCTGCTGT CCTTGGATTGCTTTCCGAAGATTCATAGATTGGCTGAAGTACCCTCTGGACCTCGCTGCA CGGCAGGGTCCCTCATTGCCCAATATGGCACAGGGTTCTCGTGACAATGATGACAAAGTT GCTCACTTCCAGGCGGTCACAGGCTTGCAAGACTCTTCATTGTGTGCGCAGATCTTACAA GCTTATAATTGGGACCTCGACCTAGCTGTTGGCTCCATGGCTGACGGAGTGGTTCCCGAT GATGCAGCATTCACGTCATCTGATAACATTGGAGGCCATACCCTTGATGCCAGTGCAGGC CCGTCCAGTCCTTATGATGATGGTGTGAATCGTGTCAACATGCCTACCGAAGAAGCTCGC CTCGTGAATGCTAACAGAAACCATGCTGTCGTGCCTCATCAAGCAGGGCCTGGTTTGATA TGGAGGGTAGCCACTCTCCCCTTTTCAGTTATAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q924K2 |
Definition |
sp|Q924K2|FAF1_RAT FAS-associated factor 1 OS=Rattus norvegicus |
Align length |
71 |
Score (bit) |
39.3 |
E-value |
0.014 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9M0N1 |
Definition |
tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g10790 OS=Arabidopsis thaliana |
Align length |
117 |
Score (bit) |
70.1 |
E-value |
8.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956065|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_M07, 5' (574 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g1079... 70 8e-11 tr|O82483|O82483_ARATH T12H20.9 protein OS=Arabidopsis thaliana ... 70 8e-11 tr|Q5DJU1|Q5DJU1_CAPAN Fas-associated factor 1-like protein OS=C... 70 1e-10 tr|B6TD00|B6TD00_MAIZE Fas-associated factor 1-like protein OS=Z... 69 2e-10 tr|B4FMI4|B4FMI4_MAIZE Putative uncharacterized protein OS=Zea m... 69 2e-10 tr|A7QJ86|A7QJ86_VITVI Chromosome chr2 scaffold_105, whole genom... 69 2e-10 tr|Q9FWC4|Q9FWC4_ORYSJ cDNA clone:J023077I21, full insert sequen... 67 9e-10 tr|A3C6J4|A3C6J4_ORYSJ Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|A2Z9E8|A2Z9E8_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|A9RJT6|A9RJT6_PHYPA Predicted protein OS=Physcomitrella paten... 59 1e-07 tr|Q5Z8Z8|Q5Z8Z8_ORYSJ Putative uncharacterized protein P0656E03... 55 2e-06 tr|A3BCT1|A3BCT1_ORYSJ Putative uncharacterized protein OS=Oryza... 55 2e-06 tr|B8B3S6|B8B3S6_ORYSI Putative uncharacterized protein OS=Oryza... 54 5e-06 tr|A9TYB0|A9TYB0_PHYPA Predicted protein (Fragment) OS=Physcomit... 53 1e-05 tr|A9U4R0|A9U4R0_PHYPA Predicted protein OS=Physcomitrella paten... 51 4e-05 tr|B0XAP2|B0XAP2_CULQU UBX domain-containing protein 8 OS=Culex ... 47 7e-04 tr|Q17DA0|Q17DA0_AEDAE Fas-associated protein OS=Aedes aegypti G... 44 0.005 tr|B4KGA1|B4KGA1_DROMO GI16862 OS=Drosophila mojavensis GN=GI168... 40 0.070 tr|Q7Q3P6|Q7Q3P6_ANOGA AGAP007977-PA OS=Anopheles gambiae GN=AGA... 40 0.091 tr|B4JAN7|B4JAN7_DROGR GH11459 OS=Drosophila grimshawi GN=GH1145... 40 0.12 tr|Q29RM7|Q29RM7_BOVIN Fas (TNFRSF6) associated factor 1 OS=Bos ... 39 0.20 tr|B4LTS3|B4LTS3_DROVI GJ17201 OS=Drosophila virilis GN=GJ17201 ... 39 0.20 tr|A9ULP0|A9ULP0_XENTR Expressed in T-cells and eosinophils in a... 39 0.27 tr|B7FQE3|B7FQE3_PHATR Predicted protein OS=Phaeodactylum tricor... 39 0.27 tr|Q6P1F8|Q6P1F8_MOUSE Fas-associated factor 1 OS=Mus musculus G... 38 0.45 tr|Q29LE0|Q29LE0_DROPS GA10282 OS=Drosophila pseudoobscura pseud... 38 0.45 tr|B4GQ59|B4GQ59_DROPE GL14719 OS=Drosophila persimilis GN=GL147... 38 0.45 tr|Q9VJ58|Q9VJ58_DROME Fas-associated factor OS=Drosophila melan... 37 0.59 tr|O77047|O77047_DROME Fas-associated factor OS=Drosophila melan... 37 0.59 tr|B7QCT9|B7QCT9_IXOSC UBX domain-containing protein, putative O... 37 0.59
>tr|Q9M0N1|Q9M0N1_ARATH Putative uncharacterized protein AT4g10790 OS=Arabidopsis thaliana GN=At4g10790 PE=4 SV=1 Length = 480
Score = 70.1 bits (170), Expect = 8e-11 Identities = 41/117 (35%), Positives = 64/117 (54%) Frame = +1
Query: 223 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 402 D DK+ +FQA+TGL+D+ LC +ILQA+ WDL+LA+ S D A +S+ + GG+ Sbjct: 3 DTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTSS---DQDASSSAVDGGGNN 59
Query: 403 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 D ++ D R + ++ LV + GPG+ WR+ TLP S++ Sbjct: 60 RDHDHNNATVTPDYPPRGIV--DDTELVMRDDGGG----NRGPGVAWRIITLPISIV 110
>tr|O82483|O82483_ARATH T12H20.9 protein OS=Arabidopsis thaliana GN=T12H20.9 PE=4 SV=1 Length = 466
Score = 70.1 bits (170), Expect = 8e-11 Identities = 41/117 (35%), Positives = 64/117 (54%) Frame = +1
Query: 223 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 402 D DK+ +FQA+TGL+D+ LC +ILQA+ WDL+LA+ S D A +S+ + GG+ Sbjct: 3 DTVDKLGYFQAITGLEDADLCTEILQAHGWDLELAISSFTSS---DQDASSSAVDGGGNN 59
Query: 403 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 D ++ D R + ++ LV + GPG+ WR+ TLP S++ Sbjct: 60 RDHDHNNATVTPDYPPRGIV--DDTELVMRDDGGG----NRGPGVAWRIITLPISIV 110
>tr|Q5DJU1|Q5DJU1_CAPAN Fas-associated factor 1-like protein OS=Capsicum annuum PE=2 SV=1 Length = 468
Score = 69.7 bits (169), Expect = 1e-10 Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 3/120 (2%) Frame = +1
Query: 223 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVG---SMADGVVPDDAAFTSSDNIG 393 D DK+A+FQA+TGL+D+ LC +IL A+ WDL+LA+ S D PD+ AF Sbjct: 3 DVADKIAYFQAITGLEDADLCTEILAAHGWDLELAISVFTSQNDHSAPDNPAFEPPT--- 59
Query: 394 GHTLDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 + + P E L+ A N PG+ W++ TLPFS+I Sbjct: 60 -----------------TSNLTPPVETTGLI-AGGNGGAAAATGPPGIAWKIITLPFSII 101
>tr|B6TD00|B6TD00_MAIZE Fas-associated factor 1-like protein OS=Zea mays PE=2 SV=1 Length = 466
Score = 68.9 bits (167), Expect = 2e-10 Identities = 42/115 (36%), Positives = 56/115 (48%) Frame = +1
Query: 229 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 408 DDK+++FQAVTG+ D+ LC +IL A+NWDL LAV S+ A SS + T Sbjct: 6 DDKISYFQAVTGISDTDLCTEILAAHNWDLQLAVSSI--------TANPSSPSAPVSTSS 57
Query: 409 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 PS+P D P P Q PG+ W++ TLPF V+ Sbjct: 58 RDPAPSAPLADAEFVAPPPP------------IPPPPQQQPGIAWKLVTLPFYVV 100
>tr|B4FMI4|B4FMI4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 469
Score = 68.9 bits (167), Expect = 2e-10 Identities = 41/115 (35%), Positives = 57/115 (49%) Frame = +1
Query: 229 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 408 DDKV++FQAVTG+ ++ LC +IL A+NWDL LAV ++ A SS + T Sbjct: 6 DDKVSYFQAVTGISNTDLCTEILAAHNWDLQLAVSTI--------TANPSSPSASASTSS 57
Query: 409 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 PS+P V P +P Q PG+ W++ TLPF V+ Sbjct: 58 RDPAPSAPLAVDAEYVAPPPPLP---------LPLPPQQQPGIAWKLVTLPFHVV 103
>tr|A7QJ86|A7QJ86_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000545001 PE=4 SV=1 Length = 292
Score = 68.6 bits (166), Expect = 2e-10 Identities = 45/117 (38%), Positives = 65/117 (55%) Frame = +1
Query: 223 DNDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHT 402 D DK+A+FQA+TGL+D LC++IL A+ WDL+LA+ S T+SD Sbjct: 3 DVADKLAYFQAITGLEDPDLCSEILAAHGWDLELAISSF---------TVTNSDR----- 48
Query: 403 LDASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 ++SA ++ + V R +EE RL+ + V A PGL W++ TLP SVI Sbjct: 49 PESSATVAADVAE-VGRSEQSSEELRLLQISETMGGV--VAPPGLAWKLITLPISVI 102
>tr|Q9FWC4|Q9FWC4_ORYSJ cDNA clone:J023077I21, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0018B10.16 PE=2 SV=1 Length = 466
Score = 66.6 bits (161), Expect = 9e-10 Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 5/120 (4%) Frame = +1
Query: 229 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 408 DDKV++FQAVTG+ D LC +IL A+NWDL LAV S+ Sbjct: 6 DDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSI----------------------- 42
Query: 409 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVP-----HQAGPGLIWRVATLPFSVI 573 +A PSSP D +P R + H P Q PG+ W++ TLPF V+ Sbjct: 43 -TANPSSP--DPAPSAPLPPLAPREADLVAPHLPPPPQQQQQQQQPGIAWKLVTLPFYVV 99
>tr|A3C6J4|A3C6J4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_030916 PE=4 SV=1 Length = 436
Score = 66.6 bits (161), Expect = 9e-10 Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 5/120 (4%) Frame = +1
Query: 229 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMADGVVPDDAAFTSSDNIGGHTLD 408 DDKV++FQAVTG+ D LC +IL A+NWDL LAV S+ Sbjct: 6 DDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSI----------------------- 42
Query: 409 ASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVP-----HQAGPGLIWRVATLPFSVI 573 +A PSSP D +P R + H P Q PG+ W++ TLPF V+ Sbjct: 43 -TANPSSP--DPAPSAPLPPLAPREADLVAPHLPPPPQQQQQQQQPGIAWKLVTLPFYVV 99
>tr|A2Z9E8|A2Z9E8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_34349 PE=4 SV=1 Length = 465
Score = 65.5 bits (158), Expect = 2e-09 Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 1/116 (0%) Frame = +1
Query: 229 DDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSM-ADGVVPDDAAFTSSDNIGGHTL 405 DDKV++FQAVTG+ D LC +IL A+NWDL LAV S+ A+ PD A Sbjct: 6 DDKVSYFQAVTGISDHDLCTEILAAHNWDLQLAVSSITANPSSPDPAP------------ 53
Query: 406 DASAGPSSPYDDGVNRVNMPTEEARLVNANRNHAVVPHQAGPGLIWRVATLPFSVI 573 A P +P + + ++P + Q PG+ W++ TLPF V+ Sbjct: 54 SAPPPPLAPREADLVAPHLPPPPQQ-----------QQQQQPGIAWKLVTLPFYVV 98
>tr|A9RJT6|A9RJT6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_115360 PE=4 SV=1 Length = 475
Score = 59.3 bits (142), Expect = 1e-07 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Frame = +1
Query: 226 NDDKVAHFQAVTGLQDSSLCAQILQAYNWDLDLAVGSMAD---GVVPDDAAFTSSDNIGG 396 + K+A+FQ +TG++DSSL QIL AY WDLD A+ +M D V+P+ ++S + Sbjct: 2 DQQKLAYFQEITGVKDSSLSHQILDAYGWDLDSAIQAMVDKTTNVIPEYEEMSTSLSPPS 61
Query: 397 HTLDASAGPSSPYDDGVNRVNMPTEEARLV--------NANRNHAVVPHQAGPGLIWRVA 552 H +P G+ + R + + A V G +WRV Sbjct: 62 H---------NPSPGGIQVTEQSFVDDRSLFERIGDGEHFQGPSAGVESSDGTTFVWRVV 112
Query: 553 TLPFSVI 573 TLPF+++ Sbjct: 113 TLPFTIL 119
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