DK956066 |
Clone id |
TST39A01NGRL0024_M08 |
Library |
TST39 |
Length |
580 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_M08. 5' end sequence. |
Accession |
DK956066 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL233Contig1 |
Sequence |
CTGCGTGGGCGGAGCTTCGAGCAACTGAACGAAGGGCTTTGCTTAAGCGGAATTTCCCTC TTAGGGCTACCGGTCAAAAGCTTCAGGCAGCTCAGACGCTCCTTGAGAAGGAGATGCTGC AGATTCTGTTGTAGGTGTGTTCTCTTCACTCCGGTGAAGTGAAGACCGGTGATATGTACA AAGATAGGGGTGATGGGCGTGGTGGAAGCCGTGAATCTATCGATGCTAAGAAGCGCATTG AGGAGACTCTAGAGAGGACATCTCCTTCGACATCCAAGGGAAATGCAAGGGAAAAAGATC GTGTTTCTATGGTGCCTGCATCAACTGGTAGACGCCTAGGCTCTGTTGACTTAAGGCCTA CATTTGACAAGACCAAGTATGCAGACGATGGCGAAGAATCAGAGACTGACAGCGAAGAAT CGGATGTTAGTGGATCAGATGGTGACGACACTTCTTGGGTTTCTTGGTTTTGCGGTTTGA GAGGGAATGAGTTCTTTTGTGAGGTGGACGACGAGTACATTCAGGATGATTTCAATTTAA GTGGACTTAAGCAGCCAGGTCCCTTTATTATGAGTATGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P40228 |
Definition |
sp|P40228|CSK2B_ARATH Casein kinase II subunit beta OS=Arabidopsis thaliana |
Align length |
128 |
Score (bit) |
65.1 |
E-value |
2.0e-10 |
Report |
 |
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T768 |
Definition |
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
121 |
Score (bit) |
99.0 |
E-value |
2.0e-19 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956066|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_M08, 5' (580 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella paten... 99 2e-19 tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella paten... 82 2e-14 tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea... 75 3e-12 tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella paten... 75 3e-12 tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genom... 72 3e-11 tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis... 72 3e-11 tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Popul... 69 2e-10 tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS... 68 4e-10 tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative... 68 4e-10 tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare ... 68 4e-10 tr|B8BIA2|B8BIA2_ORYSI Putative uncharacterized protein OS=Oryza... 68 4e-10 tr|Q9FQF8|Q9FQF8_MAIZE Protein kinase CK2 regulatory subunit CK2... 67 5e-10 tr|Q7XC26|Q7XC26_ORYSJ Casein kinase II beta-4 subunit, putative... 67 9e-10 tr|Q336R6|Q336R6_ORYSJ Os10g0564900 protein OS=Oryza sativa subs... 67 9e-10 tr|B6T9Z0|B6T9Z0_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 67 9e-10 tr|Q2V308|Q2V308_ARATH Uncharacterized protein At5g47080.3 OS=Ar... 66 1e-09 tr|A9S7H2|A9S7H2_PHYPA Predicted protein OS=Physcomitrella paten... 66 2e-09 tr|Q3E8F5|Q3E8F5_ARATH Uncharacterized protein At5g47080.2 OS=Ar... 65 3e-09 tr|Q9FQF7|Q9FQF7_MAIZE Protein kinase CK2 regulatory subunit CK2... 65 4e-09 tr|B6SQ06|B6SQ06_MAIZE Casein kinase II subunit beta-4 OS=Zea ma... 65 4e-09 tr|B4FN07|B4FN07_MAIZE Putative uncharacterized protein OS=Zea m... 65 4e-09 tr|B4FZQ7|B4FZQ7_MAIZE Putative uncharacterized protein OS=Zea m... 64 5e-09 tr|Q8LPD2|Q8LPD2_TOBAC Protein kinase Ck2 regulatory subunit 2 O... 63 1e-08 tr|A8HPM0|A8HPM0_CHLRE Casein kinase 2 beta chain, CK2B (Fragmen... 60 7e-08 tr|A4RSN9|A4RSN9_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 7e-08 tr|Q70Z23|Q70Z23_TOBAC Protein kinase 2 beta chain OS=Nicotiana ... 60 9e-08 tr|Q541V5|Q541V5_ARATH Putative casein kinase II beta chain CKB2... 60 9e-08 tr|Q2A992|Q2A992_BRAOL Casein kinase II beta chain, putative OS=... 60 9e-08 tr|B8CEY5|B8CEY5_THAPS Predicted protein (Fragment) OS=Thalassio... 60 9e-08 tr|B7FJF9|B7FJF9_MEDTR Putative uncharacterized protein (Fragmen... 60 9e-08
>tr|A9T768|A9T768_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_59578 PE=4 SV=1 Length = 298
Score = 99.0 bits (245), Expect = 2e-19 Identities = 54/121 (44%), Positives = 68/121 (56%), Gaps = 2/121 (1%) Frame = +3
Query: 210 RESIDAKKRIEETLERTSPSTSKGN-AREKDRVSMVPAST-GRRLGSVDLRPTFDKTKYA 383 R+ D KKR+E+ ++++SPSTS+G REKDR++ A+T RR + RPT +K KY Sbjct: 26 RDVTDNKKRLEDGIDKSSPSTSRGGIGREKDRIAAPAATTQSRRNAGHETRPTMEKAKYP 85
Query: 384 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGP 563 FC LRGNEFFCEVDDEYIQDDFNLSGL P Sbjct: 86 EDAEDSESESEDSDVSASDGEDTSWISWFCSLRGNEFFCEVDDEYIQDDFNLSGLSSQVP 145
Query: 564 F 566 + Sbjct: 146 Y 146
>tr|A9T5Q0|A9T5Q0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_219176 PE=4 SV=1 Length = 299
Score = 82.4 bits (202), Expect = 2e-14 Identities = 53/124 (42%), Positives = 63/124 (50%), Gaps = 5/124 (4%) Frame = +3
Query: 210 RESIDAKKRIEETLERTSP-STSKGN-AREKDRVSMVPASTGR-RLGSVDLRPTFDKTKY 380 R+ D KKR E + P STSKG REKDR++ + T R +++ RPT +K KY Sbjct: 24 RDVTDNKKRFEGGIPLLQPPSTSKGLIGREKDRIAAAASKTQTSRNAALEARPTLEKAKY 83
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXX--FCGLRGNEFFCEVDDEYIQDDFNLSGLKQ 554 FCGLRGNEFFCEVDDEYIQDDFNLSGL Sbjct: 84 PEDVAAEDSESESEDSDVSASDGEDTSWISWFCGLRGNEFFCEVDDEYIQDDFNLSGLSS 143
Query: 555 PGPF 566 P+ Sbjct: 144 QVPY 147
>tr|B8LPQ3|B8LPQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 297
Score = 75.1 bits (183), Expect = 3e-12 Identities = 49/120 (40%), Positives = 56/120 (46%), Gaps = 7/120 (5%) Frame = +3
Query: 228 KKRIEETL------ERTSPSTSKGNAREKDRVSMVPASTGRRL-GSVDLRPTFDKTKYAX 386 +KRI + L E++ PSTSKG R+S+ S GRR G DKT YA Sbjct: 29 RKRINDALDKHLHLEKSPPSTSKGL---NGRLSIPSTSAGRRAPGDSRNASALDKTNYAE 85
Query: 387 XXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCEVDDEYIQDDFNL GL P+ Sbjct: 86 DVEDSDTDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 145
>tr|A9RL84|A9RL84_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_116155 PE=4 SV=1 Length = 249
Score = 75.1 bits (183), Expect = 3e-12 Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 1/113 (0%) Frame = +3
Query: 231 KRIEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 KR+++ +E++S STSKG +EKDR++ A+T + L + DL +++ + Sbjct: 2 KRLDDGIEKSSASTSKGWIGKEKDRLAPAAAAT-QILVAEDLESESEESDVSGSDGEDTA 60
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FCGLRGNEFFCE+DDEYIQDDFNLSGL+ P+ Sbjct: 61 WISW----------------FCGLRGNEFFCEIDDEYIQDDFNLSGLRSQVPY 97
>tr|A7PK61|A7PK61_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019032001 PE=4 SV=1 Length = 288
Score = 71.6 bits (174), Expect = 3e-11 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Frame = +3
Query: 237 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 407 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCEVDDEYIQDDFNL GL P+ Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 138
>tr|A5BGR6|A5BGR6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022015 PE=4 SV=1 Length = 282
Score = 71.6 bits (174), Expect = 3e-11 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Frame = +3
Query: 237 IEETLERTSPSTSKG-NAREKDRVSMVPASTGRRLGSVDLRPTFDKT--KYAXXXXXXXX 407 +++ LE++SPSTSKG ++++K+R+S+ S G+ +D R T + K Sbjct: 28 LDKHLEKSSPSTSKGLSSKDKERLSVPSTSAGK--SQLDHRDTRAASLPKNKCSDEESET 85
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCEVDDEYIQDDFNL GL P+ Sbjct: 86 DSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQVPY 138
>tr|A9PJM8|A9PJM8_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 330
Score = 68.9 bits (167), Expect = 2e-10 Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 12/122 (9%) Frame = +3
Query: 237 IEETLERTSPSTSKG---NAREKDRVSMVPASTGRRLGS---------VDLRPTFDKTKY 380 +++ LE++SPSTS+G ++++K+R+S+ STG+ L D R +K Sbjct: 31 LDKHLEKSSPSTSRGLNNSSKDKERLSVPSTSTGKSLQHHQQQLDHHRADSRSA-SLSKN 89
Query: 381 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPG 560 FC LRGNEFFCEVDDEYIQDDFNL GL Sbjct: 90 KCSDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDEYIQDDFNLCGLSSQV 149
Query: 561 PF 566 P+ Sbjct: 150 PY 151
>tr|Q9AY38|Q9AY38_ORYSA Putative casein kinase II beta subunit OS=Oryza sativa GN=OSJNBa0027P10.8 PE=4 SV=1 Length = 280
Score = 67.8 bits (164), Expect = 4e-10 Identities = 42/113 (37%), Positives = 56/113 (49%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCE+DD+YIQDDFNL GL P+ Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPY 129
>tr|Q336R5|Q336R5_ORYSJ Casein kinase II beta-4 subunit, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os10g41520 PE=4 SV=2 Length = 280
Score = 67.8 bits (164), Expect = 4e-10 Identities = 42/113 (37%), Positives = 56/113 (49%) Frame = +3
Query: 228 KKRIEETLERTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXXXXXX 407 K +E+ L+R+SPSTS+G A K+R + A+ G +L + P K + Sbjct: 23 KDVLEKHLDRSSPSTSRGAAVAKERDRL--AAAGGKLPA----PLGKAGKVSDGAEEFET 76
Query: 408 XXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCE+DD+YIQDDFNL GL P+ Sbjct: 77 DSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPY 129
>tr|Q0KKA4|Q0KKA4_HORVU Casein kinase II beta OS=Hordeum vulgare GN=Hvck2b PE=2 SV=1 Length = 259
Score = 67.8 bits (164), Expect = 4e-10 Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 4/117 (3%) Frame = +3
Query: 228 KKRIEETLE----RTSPSTSKGNAREKDRVSMVPASTGRRLGSVDLRPTFDKTKYAXXXX 395 +KRI+E LE R SPSTS+G +REK+ ++ +T ++G V ++ + Sbjct: 3 RKRIKEALEKHTERPSPSTSRGASREKEMLAAGKITT--QIGKVPKVSDVEEFE------ 54
Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXFCGLRGNEFFCEVDDEYIQDDFNLSGLKQPGPF 566 FC LRGNEFFCE+DD+YIQDDFNL GL P+ Sbjct: 55 ---TDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQVPY 108
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