| DK956072 |
| Clone id |
TST39A01NGRL0024_M14 |
| Library |
TST39 |
| Length |
534 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_M14. 5' end sequence. |
| Accession |
DK956072 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
- |
| Sequence |
GTGAAGGATGAGATTGATTGCTTGCCATATCCAACAACAGGTGGTTCAAAGTGGCTACGT AAGGCAAGAAAAGTGACAGAAGATGCAGCCGCTGTACAAAGGTTACGAGAGTGTGGTGCT TTGCTGGTAGGGAAAACCAACATGCATGAGCTCGGCATGGGGACCACTGGCATCCATCCA CATTATGGTGCAAGTAGGAACCCTTATGACAGTAGCAGAATTTCTGGAGGCTCTTCGGGA GGCTCAGCTGCTGTAGTTTCTGCTGGACTCTGTCCAGCGGCTCTTGGTGTCGATGGTGGA GGTTCCGTACGCATGCCATCGGCTCTTTGTGGGATAGTTGGTTTCAAGGCAACATTTGGT CGAATTTCATCCTCTGGGGTGTTGCCTCTCAACTGGACCCTTGGAATGGTTGGAGTTCAT GCAGCCACAGTGGAAGATGCTTTGATAATGTATGCAGTCATGAATGGGCATCTTCCAAGT GATCGCACTATCTCAATACCGCCCCCAACCAATTTGCCCTTGCTGAAAGAATTT |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
A1VFG9 |
| Definition |
sp|A1VFG9|GATA_DESVV Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) |
| Align length |
168 |
| Score (bit) |
120.0 |
| E-value |
3.0e-27 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RF57 |
| Definition |
tr|A9RF57|A9RF57_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
177 |
| Score (bit) |
247.0 |
| E-value |
2.0e-64 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956072|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_M14, 5' (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RF57|A9RF57_PHYPA Predicted protein (Fragment) OS=Physcomit... 247 2e-64 tr|A7PKQ4|A7PKQ4_VITVI Chromosome chr7 scaffold_20, whole genome... 236 4e-61 tr|A9SAR4|A9SAR4_PHYPA Predicted protein OS=Physcomitrella paten... 223 5e-57 tr|A9RC88|A9RC88_PHYPA Predicted protein (Fragment) OS=Physcomit... 220 3e-56 tr|Q2QX53|Q2QX53_ORYSJ Amidase family protein, expressed OS=Oryz... 214 2e-54 tr|Q0IPT7|Q0IPT7_ORYSJ Os12g0169000 protein OS=Oryza sativa subs... 214 2e-54 tr|B8BND4|B8BND4_ORYSI Putative uncharacterized protein OS=Oryza... 214 2e-54 tr|Q2RA14|Q2RA14_ORYSJ Amidase family protein, expressed OS=Oryz... 214 2e-54 tr|B8BJB5|B8BJB5_ORYSI Putative uncharacterized protein OS=Oryza... 214 2e-54 tr|B8A204|B8A204_MAIZE Putative uncharacterized protein OS=Zea m... 210 3e-53 tr|Q53JH5|Q53JH5_ORYSJ Amidase, putative (Putative uncharacteriz... 207 2e-52 tr|A9RI18|A9RI18_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 3e-45 tr|A5BWC9|A5BWC9_VITVI Putative uncharacterized protein OS=Vitis... 182 1e-44 tr|Q9LLC0|Q9LLC0_ARATH Amidase OS=Arabidopsis thaliana PE=2 SV=1 176 9e-43 tr|Q9FGF2|Q9FGF2_ARATH Similarity to glutamyl-tRNA amidotransfer... 176 9e-43 tr|Q7XJJ7|Q7XJJ7_ARATH N-acylethanolamine amidohydrolase OS=Arab... 176 9e-43 tr|A7QSA3|A7QSA3_VITVI Chromosome chr3 scaffold_157, whole genom... 174 3e-42 tr|Q4FCX5|Q4FCX5_MEDTR N-acylethanolamine amidohydrolase OS=Medi... 172 1e-41 tr|Q7XTB3|Q7XTB3_ORYSJ OSJNBa0068L06.10 protein (N-acylethanolam... 164 2e-39 tr|Q0JFH7|Q0JFH7_ORYSJ Os04g0102700 protein OS=Oryza sativa subs... 164 2e-39 tr|Q01N44|Q01N44_ORYSA OSIGBa0123D13.5 protein OS=Oryza sativa G... 164 2e-39 tr|B8ATY3|B8ATY3_ORYSI Putative uncharacterized protein OS=Oryza... 164 2e-39 tr|A3AQ36|A3AQ36_ORYSJ Putative uncharacterized protein OS=Oryza... 164 2e-39 tr|A2Q1B2|A2Q1B2_MEDTR Amidase OS=Medicago truncatula GN=MtrDRAF... 160 3e-38 tr|Q1D2X4|Q1D2X4_MYXXD Amidase family protein OS=Myxococcus xant... 147 4e-34 tr|Q2SAD5|Q2SAD5_HAHCH Asp-tRNAAsn/Glu-tRNAGln amidotransferase ... 145 1e-33 tr|B4FW81|B4FW81_MAIZE Putative uncharacterized protein OS=Zea m... 145 2e-33 tr|A7NLE3|A7NLE3_ROSCS Amidase OS=Roseiflexus castenholzii (stra... 143 6e-33 tr|A5UXU3|A5UXU3_ROSS1 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotran... 141 2e-32 tr|A8F494|A8F494_THELT Amidase OS=Thermotoga lettingae (strain A... 136 8e-31
>tr|A9RF57|A9RF57_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_113190 PE=4 SV=1 Length = 590
Score = 247 bits (631), Expect = 2e-64 Identities = 116/177 (65%), Positives = 137/177 (77%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPY TTGG+ WL K R+V EDA AV+RLR CGA++VGKTNMHELGMGTTGI+P Sbjct: 180 VKDEIDCLPYRTTGGTTWLGKVREVKEDAEAVKRLRSCGAVMVGKTNMHELGMGTTGINP 239
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 HYGA+RNP++ R+ +CPAALGVDGGGSVRMP+ LCG+VGFK TFG Sbjct: 240 HYGATRNPHNILRVSGGSSGGSSAAVAAGICPAALGVDGGGSVRMPAGLCGVVGFKPTFG 299
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVMNGHLPSDRTISIPPPTNLPLLKE 531 R S++G LPLNWT+GM+G +VEDALIMYA M+G P D +S PPP NLPLLK+ Sbjct: 300 RTSNAGFLPLNWTVGMLGTLTGSVEDALIMYAAMHGPRPDDDIVSFPPPANLPLLKD 356
>tr|A7PKQ4|A7PKQ4_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019272001 PE=4 SV=1 Length = 574
Score = 236 bits (603), Expect = 4e-61 Identities = 111/176 (63%), Positives = 132/176 (75%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 +KDEIDC PYPTTGG+ WL K R DA VQRLR CGA+LVGKTNMHELG GT+GI+P Sbjct: 174 IKDEIDCTPYPTTGGTTWLHKVRDCKNDACCVQRLRSCGAILVGKTNMHELGAGTSGINP 233
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 HYGA+RNPY++S++ LCPAALGVDGGGSVRMP+ALCG+VGFK TFG Sbjct: 234 HYGATRNPYNTSKVTGGSSSGSAAVVSAGLCPAALGVDGGGSVRMPAALCGVVGFKPTFG 293
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVMNGHLPSDRTISIPPPTNLPLLK 528 R+S SGVLPLNWT+GMVG+ A+TVEDA I+YA ++G S + + P PLLK Sbjct: 294 RVSHSGVLPLNWTVGMVGILASTVEDAFIVYAAISGETSSHQPTMLLPKVCFPLLK 349
>tr|A9SAR4|A9SAR4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_76836 PE=4 SV=1 Length = 709
Score = 223 bits (568), Expect = 5e-57 Identities = 104/164 (63%), Positives = 123/164 (75%) Frame = +1
Query: 40 GGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHPHYGASRNPYDSSR 219 GG WL K R+VTEDAA V+RLRECGA++VG TNMHELG GTTGI+PHYG +RNP+D +R Sbjct: 217 GGCTWLDKTRQVTEDAAVVKRLRECGAIMVGNTNMHELGAGTTGINPHYGTTRNPHDRTR 276
Query: 220 IXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFGRISSSGVLPLNWT 399 I LCP ALGVDGGGSVRMP++LCGIVG K TFGRI+ SG+LPLNWT Sbjct: 277 ISGGSSGGSAATVAAGLCPIALGVDGGGSVRMPASLCGIVGLKPTFGRITKSGLLPLNWT 336
Query: 400 LGMVGVHAATVEDALIMYAVMNGHLPSDRTISIPPPTNLPLLKE 531 +GM+G +VEDA I+YA GHLPSD+ +S PPP LPLL + Sbjct: 337 IGMLGTLTGSVEDAYIIYAAKQGHLPSDKLLSFPPPATLPLLND 380
>tr|A9RC88|A9RC88_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_111742 PE=4 SV=1 Length = 601
Score = 220 bits (561), Expect = 3e-56 Identities = 103/154 (66%), Positives = 123/154 (79%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGGS WL KAR+VT+DAA V+RLRECGA++VGKTNMHELG+GTTGI+P Sbjct: 184 VKDEIDCLPYPTTGGSTWLGKARQVTKDAAVVKRLRECGAVMVGKTNMHELGVGTTGINP 243
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 HYGA+RNP+D +R+ LCP ALGVDGGGSVRMP++L G+VG K TFG Sbjct: 244 HYGATRNPHDMTRVSGGSSGGSATVVAAGLCPVALGVDGGGSVRMPASLSGVVGLKPTFG 303
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVM 462 RI+ SG+LPLNWT+GMVG TVEDA I +++ Sbjct: 304 RIAKSGLLPLNWTIGMVGTLTGTVEDAYIFVSLL 337
>tr|Q2QX53|Q2QX53_ORYSJ Amidase family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g07150 PE=4 SV=1 Length = 603
Score = 214 bits (546), Expect = 2e-54 Identities = 105/177 (59%), Positives = 130/177 (73%), Gaps = 1/177 (0%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGG++WL +AR DAA V +LR CGA+L GKTNMHELG GT+GI+P Sbjct: 206 VKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQLRACGAVLAGKTNMHELGAGTSGINP 265
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+G++RNP++ R+ LCP ALGVDGGGSVRMP+ALCG+VGFK T G Sbjct: 266 HHGSTRNPHNPGRVSGGSSSGSAAAVCAGLCPVALGVDGGGSVRMPAALCGVVGFKPTAG 325
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMY-AVMNGHLPSDRTISIPPPTNLPLLK 528 R+S++GVLPLNWT+GM G+ A TVEDA + Y A+++ PS + P NLPLLK Sbjct: 326 RLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIVDQSQPS----YLRPELNLPLLK 378
>tr|Q0IPT7|Q0IPT7_ORYSJ Os12g0169000 protein OS=Oryza sativa subsp. japonica GN=Os12g0169000 PE=4 SV=1 Length = 552
Score = 214 bits (546), Expect = 2e-54 Identities = 105/177 (59%), Positives = 130/177 (73%), Gaps = 1/177 (0%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGG++WL +AR DAA V +LR CGA+L GKTNMHELG GT+GI+P Sbjct: 206 VKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQLRACGAVLAGKTNMHELGAGTSGINP 265
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+G++RNP++ R+ LCP ALGVDGGGSVRMP+ALCG+VGFK T G Sbjct: 266 HHGSTRNPHNPGRVSGGSSSGSAAAVCAGLCPVALGVDGGGSVRMPAALCGVVGFKPTAG 325
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMY-AVMNGHLPSDRTISIPPPTNLPLLK 528 R+S++GVLPLNWT+GM G+ A TVEDA + Y A+++ PS + P NLPLLK Sbjct: 326 RLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIVDQSQPS----YLRPELNLPLLK 378
>tr|B8BND4|B8BND4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37616 PE=4 SV=1 Length = 571
Score = 214 bits (546), Expect = 2e-54 Identities = 105/177 (59%), Positives = 130/177 (73%), Gaps = 1/177 (0%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGG++WL +AR DAA V +LR CGA+L GKTNMHELG GT+GI+P Sbjct: 206 VKDEIDCLPYPTTGGTRWLGRARACAADAAVVAQLRACGAVLAGKTNMHELGAGTSGINP 265
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+G++RNP++ R+ LCP ALGVDGGGSVRMP+ALCG+VGFK T G Sbjct: 266 HHGSTRNPHNPGRVSGGSSSGSAAAVCAGLCPVALGVDGGGSVRMPAALCGVVGFKPTAG 325
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMY-AVMNGHLPSDRTISIPPPTNLPLLK 528 R+S++GVLPLNWT+GM G+ A TVEDA + Y A+++ PS + P NLPLLK Sbjct: 326 RLSNAGVLPLNWTVGMPGILAGTVEDAAVAYSAIVDQSQPS----YLRPELNLPLLK 378
>tr|Q2RA14|Q2RA14_ORYSJ Amidase family protein, expressed OS=Oryza sativa subsp. japonica GN=Os11g0170000 PE=4 SV=1 Length = 610
Score = 214 bits (545), Expect = 2e-54 Identities = 102/176 (57%), Positives = 126/176 (71%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGG++WL++ R +DAA V +LR CGA+L GKTNMHELG GT+GI+P Sbjct: 211 VKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTSGINP 270
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+G++RNPY++ ++ LCP ALG DGGGSVRMP+ALCG+VG K T G Sbjct: 271 HHGSTRNPYNTGKVAGGSSGGSAAVVCAGLCPVALGADGGGSVRMPAALCGVVGLKPTAG 330
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVMNGHLPSDRTISIPPPTNLPLLK 528 R S G+LPLNWT+GM G+ AATVEDALI YA + + + P NLPLLK Sbjct: 331 RFSKDGLLPLNWTVGMPGILAATVEDALIAYAAI---ADQSQPSHLQPELNLPLLK 383
>tr|B8BJB5|B8BJB5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_35272 PE=4 SV=1 Length = 610
Score = 214 bits (545), Expect = 2e-54 Identities = 102/176 (57%), Positives = 126/176 (71%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDEIDCLPYPTTGG++WL++ R +DAA V +LR CGA+L GKTNMHELG GT+GI+P Sbjct: 211 VKDEIDCLPYPTTGGTRWLQRMRPCVQDAAVVAQLRACGAVLAGKTNMHELGAGTSGINP 270
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+G++RNPY++ ++ LCP ALG DGGGSVRMP+ALCG+VG K T G Sbjct: 271 HHGSTRNPYNTGKVAGGSSGGSAAVVCAGLCPVALGADGGGSVRMPAALCGVVGLKPTAG 330
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVMNGHLPSDRTISIPPPTNLPLLK 528 R S G+LPLNWT+GM G+ AATVEDALI YA + + + P NLPLLK Sbjct: 331 RFSKDGLLPLNWTVGMPGILAATVEDALIAYAAI---ADQSQPSHLQPELNLPLLK 383
>tr|B8A204|B8A204_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 424
Score = 210 bits (535), Expect = 3e-53 Identities = 102/178 (57%), Positives = 128/178 (71%), Gaps = 3/178 (1%) Frame = +1
Query: 1 VKDEIDCLPYPTTGGSKWLRKARKVTEDAAAVQRLRECGALLVGKTNMHELGMGTTGIHP 180 VKDE+DCLPYPT+GG++WL AR+ DAA V +LR CGA++ GK NMHELG GT+GI+P Sbjct: 24 VKDELDCLPYPTSGGTRWLGSARRCAADAACVAQLRACGAVMAGKANMHELGAGTSGINP 83
Query: 181 HYGASRNPYDSSRIXXXXXXXXXXXXXXXLCPAALGVDGGGSVRMPSALCGIVGFKATFG 360 H+GA+RNPY+ R+ LCP ALG DGGGSVRMP+ALCG+VGFK T G Sbjct: 84 HHGATRNPYNVGRVSGGSSGGSAAAVCAGLCPVALGADGGGSVRMPAALCGVVGFKPTAG 143
Query: 361 RISSSGVLPLNWTLGMVGVHAATVEDALIMYAVMNGHLPSDRTISIP---PPTNLPLL 525 R+S+SG+LPLNWT+GM G+ AATVED LI YA + +D++ P P NLP+L Sbjct: 144 RLSNSGLLPLNWTVGMPGILAATVEDTLIAYAAI-----ADQSKPSPLQQPELNLPML 196
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