DK956083
Clone id TST39A01NGRL0024_N01
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_N01. 5' end sequence.
Accession
Tissue type prothallia with plantlets
Developmental stage gametophytes with sporophytes
Contig ID
Sequence
AATTCCCACCCATGAAGTACGGCGCAGGCTCCCGCGCCTGTCGTGTTTGCGGAAATGTTC
ATGGGCTTGTACGGAAGTACAATCTGATGTGCTGTAGACAGTGCTTCCGCATCTATCCTA
GGGACATTGGCTTTGTGAAGTATCGCTAGGTTAGTTTAATGGACGTACGCTCGGCTGCAA
CCACCTTGGAATCTTTGGCAAAGGTGGTTTTCAACATGTGGAAGGAGTGTATGGACATGT
AGTTTCAATTATGATTAATAGAGTTTTATTGTTCACTATGAAACGATCTCATGGGACCAA
AACTTTTTTCCATGGATTCTCCTCTTTTCTTTCTGGGATGCTTCCGGCCCAGTGCTGTGT
GTAGGGGTGGACGCCTGGTTGGTTTGTTTTGAGTATTTGCAATGTGAAACTAAGCTACGG
ATCAAAAAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q5I7K3
Definition sp|Q5I7K3|RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum
Align length 46
Score (bit) 84.7
E-value 1.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956083|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_N01, 5'
(423 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5I7K3|RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aesti... 85 1e-16
sp|Q680P8|RS29_ARATH 40S ribosomal protein S29 OS=Arabidopsis th... 80 2e-15
sp|Q7XYB0|RS29_GRIJA 40S ribosomal protein S29 OS=Griffithsia ja... 80 3e-15
sp|Q90YP2|RS29_ICTPU 40S ribosomal protein S29 OS=Ictalurus punc... 74 3e-13
sp|Q6UZG0|RS29_HIPCM 40S ribosomal protein S29 OS=Hippocampus co... 74 3e-13
sp|P62275|RS29_RAT 40S ribosomal protein S29 OS=Rattus norvegicu... 73 4e-13
sp|Q5R9J0|RS29_PONAB 40S ribosomal protein S29 OS=Pongo abelii G... 73 4e-13
sp|Q6QAP6|RS29_PIG 40S ribosomal protein S29 OS=Sus scrofa GN=RP... 73 4e-13
sp|P62274|RS29_MOUSE 40S ribosomal protein S29 OS=Mus musculus G... 73 4e-13
sp|P62273|RS29_HUMAN 40S ribosomal protein S29 OS=Homo sapiens G... 73 4e-13
sp|P62276|RS29_BOVIN 40S ribosomal protein S29 OS=Bos taurus GN=... 73 4e-13
sp|Q4LAY1|RS29_SCALT 40S ribosomal protein S29 OS=Scarabaeus lat... 70 3e-12
sp|Q6F473|RS29_PLUXY 40S ribosomal protein S29 OS=Plutella xylos... 70 3e-12
sp|Q9VH69|RS29_DROME 40S ribosomal protein S29 OS=Drosophila mel... 70 3e-12
sp|Q8WQI3|RS29_SPOFR 40S ribosomal protein S29 OS=Spodoptera fru... 69 6e-12
sp|Q56FL2|RS29_LYSTE 40S ribosomal protein S29 OS=Lysiphlebus te... 69 7e-12
sp|Q4PM47|RS29_IXOSC 40S ribosomal protein S29 OS=Ixodes scapula... 69 7e-12
sp|Q9NB51|RS29_CULQU 40S ribosomal protein S29 OS=Culex quinquef... 69 7e-12
sp|Q5UAL3|RS29_BOMMO 40S ribosomal protein S29 OS=Bombyx mori GN... 69 1e-11
sp|Q5MGJ4|RS29_LONON 40S ribosomal protein S29 OS=Lonomia obliqu... 66 6e-11
sp|Q98SC7|RS29_GUITH 40S ribosomal protein S29A OS=Guillardia th... 65 1e-10
sp|Q757G1|RS29_ASHGO 40S ribosomal protein S29 OS=Ashbya gossypi... 65 1e-10
sp|Q76P36|RS29_DICDI 40S ribosomal protein S29 OS=Dictyostelium ... 64 2e-10
sp|P41058|RS29B_YEAST 40S ribosomal protein S29-B OS=Saccharomyc... 64 2e-10
sp|Q9C2P2|RS29_NEUCR 40S ribosomal protein S29 OS=Neurospora cra... 64 3e-10
sp|Q6FWE3|RS29_CANGA 40S ribosomal protein S29 OS=Candida glabra... 64 3e-10
sp|P41057|RS29A_YEAST 40S ribosomal protein S29-A OS=Saccharomyc... 64 3e-10
sp|Q5EMX3|RS29_MAGGR 40S ribosomal protein S29 OS=Magnaporthe gr... 63 5e-10
sp|Q6BY86|RS29_DEBHA 40S ribosomal protein S29 OS=Debaryomyces h... 62 1e-09
sp|Q8TW16|RS14_METKA 30S ribosomal protein S14P OS=Methanopyrus ... 59 1e-08

>sp|Q5I7K3|RS29_WHEAT 40S ribosomal protein S29 OS=Triticum aestivum
GN=RPS29 PE=3 SV=1
Length = 56

Score = 84.7 bits (208), Expect = 1e-16
Identities = 35/46 (76%), Positives = 38/46 (82%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YGAGSR CRVCGN HGL+RKY LMCCRQCFR +DIGF+KYR
Sbjct: 11 PKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56


>sp|Q680P8|RS29_ARATH 40S ribosomal protein S29 OS=Arabidopsis
thaliana GN=RPS29A PE=3 SV=2
Length = 56

Score = 80.5 bits (197), Expect = 2e-15
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P KYG GSR CRVCGN HGL+RKY L CCRQCFR ++IGF+KYR
Sbjct: 11 PKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56


>sp|Q7XYB0|RS29_GRIJA 40S ribosomal protein S29 OS=Griffithsia
japonica GN=RPS29 PE=3 SV=1
Length = 56

Score = 80.1 bits (196), Expect = 3e-15
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P KYG GSR+C++CGN HGL+RKY++ CRQCFR Y +DIGF+KYR
Sbjct: 11 PRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56


>sp|Q90YP2|RS29_ICTPU 40S ribosomal protein S29 OS=Ictalurus
punctatus GN=rps29 PE=3 SV=3
Length = 56

Score = 73.6 bits (179), Expect = 3e-13
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGFVK
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54


>sp|Q6UZG0|RS29_HIPCM 40S ribosomal protein S29 OS=Hippocampus comes
GN=rps29 PE=3 SV=3
Length = 56

Score = 73.6 bits (179), Expect = 3e-13
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGFVK
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 54


>sp|P62275|RS29_RAT 40S ribosomal protein S29 OS=Rattus norvegicus
GN=Rps29 PE=1 SV=2
Length = 56

Score = 73.2 bits (178), Expect = 4e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGF+K
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54


>sp|Q5R9J0|RS29_PONAB 40S ribosomal protein S29 OS=Pongo abelii
GN=RPS29 PE=3 SV=1
Length = 56

Score = 73.2 bits (178), Expect = 4e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGF+K
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54


>sp|Q6QAP6|RS29_PIG 40S ribosomal protein S29 OS=Sus scrofa GN=RPS29
PE=3 SV=3
Length = 56

Score = 73.2 bits (178), Expect = 4e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGF+K
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54


>sp|P62274|RS29_MOUSE 40S ribosomal protein S29 OS=Mus musculus
GN=Rps29 PE=2 SV=2
Length = 56

Score = 73.2 bits (178), Expect = 4e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGF+K
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54


>sp|P62273|RS29_HUMAN 40S ribosomal protein S29 OS=Homo sapiens
GN=RPS29 PE=1 SV=2
Length = 56

Score = 73.2 bits (178), Expect = 4e-13
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVK 140
P K+G GSR+CRVC N HGL+RKY L CRQCFR Y +DIGF+K
Sbjct: 11 PRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 54


tr_hit_id A9NJU6
Definition tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 46
Score (bit) 88.2
E-value 2.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= DK956083|Adiantum capillus-veneris mRNA, clone:
TST39A01NGRL0024_N01, 5'
(423 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea... 88 2e-16
tr|A9P0U9|A9P0U9_PICSI Putative uncharacterized protein OS=Picea... 84 5e-15
tr|Q7XZX4|Q7XZX4_ORYSJ 40S ribosomal protein S29, putative, expr... 83 6e-15
tr|A2ZG71|A2ZG71_ORYSI Putative uncharacterized protein OS=Oryza... 83 6e-15
tr|Q677D1|Q677D1_HYAOR Ribosomal protein S29 (Fragment) OS=Hyaci... 82 2e-14
tr|B6SMC7|B6SMC7_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 81 3e-14
tr|A9PAM2|A9PAM2_POPTR Putative uncharacterized protein OS=Popul... 81 3e-14
tr|A9P9S8|A9P9S8_POPTR Putative uncharacterized protein OS=Popul... 81 3e-14
tr|B6U9V0|B6U9V0_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 80 4e-14
tr|B6T147|B6T147_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 79 9e-14
tr|Q2QQ34|Q2QQ34_ORYSJ 40S ribosomal protein S29, putative, expr... 79 1e-13
tr|Q10E81|Q10E81_ORYSJ Ribosomal protein S14p/S29e containing pr... 79 1e-13
tr|B8BM34|B8BM34_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|B8BM32|B8BM32_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|B8AKJ9|B8AKJ9_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|A3AN48|A3AN48_ORYSJ Putative uncharacterized protein OS=Oryza... 79 1e-13
tr|A7PDU6|A7PDU6_VITVI Chromosome chr11 scaffold_13, whole genom... 78 2e-13
tr|B6UE01|B6UE01_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=... 77 4e-13
tr|Q67XK4|Q67XK4_ARATH Ribosomal S29 subunit OS=Arabidopsis thal... 76 7e-13
tr|A9RGD7|A9RGD7_PHYPA Predicted protein OS=Physcomitrella paten... 76 7e-13
tr|A9V6U9|A9V6U9_MONBE Predicted protein OS=Monosiga brevicollis... 76 7e-13
tr|Q6Q419|Q6Q419_DANRE Ribosomal protein S29 OS=Danio rerio GN=r... 75 2e-12
tr|Q4SC00|Q4SC00_TETNG Chromosome 14 SCAF14660, whole genome sho... 74 5e-12
tr|Q4QR32|Q4QR32_XENLA MGC114875 protein OS=Xenopus laevis GN=MG... 74 5e-12
tr|A2Q0U6|A2Q0U6_SOLSE Ribosomal protein S29 OS=Solea senegalens... 74 5e-12
tr|A0EZZ7|A0EZZ7_SCOMX 40S ribosomal protein S29 OS=Scophthalmus... 74 5e-12
tr|Q28D24|Q28D24_XENTR Ribosomal protein S29 OS=Xenopus tropical... 73 6e-12
tr|B5FZD5|B5FZD5_TAEGU Putative 40S ribosomal protein S29 OS=Tae... 73 6e-12
tr|Q209Q3|Q209Q3_9CHLO Ribosomal protein S29 subunit OS=Chlamydo... 73 6e-12
tr|Q4KTB2|Q4KTB2_SUBDO S29 OS=Suberites domuncula PE=4 SV=1 73 6e-12

>tr|A9NJU6|A9NJU6_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 56

Score = 88.2 bits (217), Expect = 2e-16
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P KYG GSRACRVCGN HGL+RKY L CCRQCFR Y +DIGFVKYR
Sbjct: 11 PKKYGPGSRACRVCGNPHGLIRKYGLNCCRQCFRTYSKDIGFVKYR 56


>tr|A9P0U9|A9P0U9_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=4 SV=1
Length = 56

Score = 83.6 bits (205), Expect = 5e-15
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HGL+RKY + CCRQCFR Y +DIGFVKYR
Sbjct: 11 PKSYGPGSRTCRVCGNSHGLIRKYGINCCRQCFRSYAKDIGFVKYR 56


>tr|Q7XZX4|Q7XZX4_ORYSJ 40S ribosomal protein S29, putative,
expressed OS=Oryza sativa subsp. japonica
GN=OSJNBb0094O03.12 PE=4 SV=1
Length = 56

Score = 83.2 bits (204), Expect = 6e-15
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HGL+RKY LMCCRQCFR +DIGF+KYR
Sbjct: 11 PKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56


>tr|A2ZG71|A2ZG71_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_36775 PE=4 SV=1
Length = 56

Score = 83.2 bits (204), Expect = 6e-15
Identities = 34/46 (73%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HGL+RKY LMCCRQCFR +DIGF+KYR
Sbjct: 11 PKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56


>tr|Q677D1|Q677D1_HYAOR Ribosomal protein S29 (Fragment)
OS=Hyacinthus orientalis GN=RPS29 PE=2 SV=1
Length = 73

Score = 81.6 bits (200), Expect = 2e-14
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HGL+RKY LMCCRQCFR ++IGF+KYR
Sbjct: 28 PSSYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 73


>tr|B6SMC7|B6SMC7_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4
SV=1
Length = 56

Score = 80.9 bits (198), Expect = 3e-14
Identities = 33/46 (71%), Positives = 36/46 (78%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVC N HGL+RKY LMCCRQCFR +DIGF+KYR
Sbjct: 11 PKNYGPGSRVCRVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56


>tr|A9PAM2|A9PAM2_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 56

Score = 80.9 bits (198), Expect = 3e-14
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HG++RKY LMCCRQCFR ++IGF+KYR
Sbjct: 11 PRNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>tr|A9P9S8|A9P9S8_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=4 SV=1
Length = 56

Score = 80.9 bits (198), Expect = 3e-14
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR CRVCGN HG++RKY LMCCRQCFR ++IGF+KYR
Sbjct: 11 PKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56


>tr|B6U9V0|B6U9V0_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4
SV=1
Length = 56

Score = 80.5 bits (197), Expect = 4e-14
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P KYG GSR CRVCGN HGL+RKY L CCRQCFR ++IGF+KYR
Sbjct: 11 PKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56


>tr|B6T147|B6T147_MAIZE 40S ribosomal protein S29 OS=Zea mays PE=4
SV=1
Length = 99

Score = 79.3 bits (194), Expect = 9e-14
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +3

Query: 9 PMKYGAGSRACRVCGNVHGLVRKYNLMCCRQCFRIYPRDIGFVKYR 146
P YG GSR C+VC N HGL+RKY LMCCRQCFR +DIGF+KYR
Sbjct: 11 PKNYGPGSRVCQVCANPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56