DK956091 |
Clone id |
TST39A01NGRL0024_N09 |
Library |
TST39 |
Length |
570 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_N09. 5' end sequence. |
Accession |
DK956091 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
- |
Sequence |
GCTAAAGGAGCCACGCTTGCCAACACACACAGAGAGGGAATGGCAATGGCGATGAACGAA GAGACGGGCACGTCCCTGCCGTTTAATCCGACCCACCCGCATGAAACGCTTCGTCACGGC CTTACCTCCTTCAAGCAGGAAGCGGTCCCCGCCCACCCAGTCGAGATCGTTCAATCCAAC TCTGAGAAGCATCACAGACAAACACAGCGGTCTTTGCTCGAAAGGGCTTATGGGTCAGCA GTTCCCTTGCGGATGGATATTGACAGGCAGATTCTCTCAAGGTTTCAGCGCCCTCCGGGC CTGTTACCATCCTCGATGTTGGGGCTACATTCTTTGACAGGAGAGCTGGATGAATTCGGT TTTGAAGATTTCTTGAATGATCCTCAAATATCTGAGTCCTTGGTTCCTATGGACATGCAT CTGCGTATGGAGGCGCAGCTTGGTCTCTCTAAGGGGCCAGCTGCTCGTACTTTCCTATAA TTTCTTAACATCTCATAGCAACGCTCTACTCGAAAAAAGTAAAGATTGTATCTGATGACG TTTTAAGCTCTCAAGTGCTGGAATTTTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q0DWQ7 |
Definition |
sp|Q0DWQ7|CCB12_ORYSJ Cyclin-B1-2 OS=Oryza sativa subsp. japonica |
Align length |
100 |
Score (bit) |
66.6 |
E-value |
8.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NKQ3 |
Definition |
tr|A9NKQ3|A9NKQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
139 |
Score (bit) |
136.0 |
E-value |
9.0e-31 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956091|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_N09, 5' (570 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NKQ3|A9NKQ3_PICSI Putative uncharacterized protein OS=Picea... 136 9e-31 tr|O65048|O65048_PICMA Putative uncharacterized protein Sb08 OS=... 135 1e-30 tr|Q9FFV7|Q9FFV7_ARATH Gb|AAB95243.1 (Putative uncharacterized p... 117 5e-25 tr|Q9FYG8|Q9FYG8_ARATH F1N21.7 OS=Arabidopsis thaliana PE=4 SV=1 112 1e-23 tr|Q94B05|Q94B05_ARATH Putative uncharacterized protein F1N21.15... 112 1e-23 tr|A7PAL6|A7PAL6_VITVI Chromosome chr14 scaffold_9, whole genome... 104 3e-21 tr|A5B647|A5B647_VITVI Putative uncharacterized protein OS=Vitis... 103 7e-21 tr|B4FLC7|B4FLC7_MAIZE Proteasome maturation factor UMP1 family ... 98 3e-19 tr|B7FIK2|B7FIK2_MEDTR Putative uncharacterized protein OS=Medic... 98 4e-19 tr|Q69IK6|Q69IK6_ORYSJ Os02g0800100 protein OS=Oryza sativa subs... 97 8e-19 tr|B8AED9|B8AED9_ORYSI Putative uncharacterized protein OS=Oryza... 97 8e-19 tr|B4FEY2|B4FEY2_MAIZE Proteasome maturation factor UMP1 family ... 95 3e-18 tr|A8JF91|A8JF91_CHLRE Predicted protein (Fragment) OS=Chlamydom... 87 7e-16 tr|A9P8J1|A9P8J1_POPTR Putative uncharacterized protein OS=Popul... 82 2e-14 tr|Q0J2Q9|Q0J2Q9_ORYSJ Os09g0314900 protein OS=Oryza sativa subs... 82 3e-14 tr|Q75IB4|Q75IB4_ORYSJ Os03g0583700 protein OS=Oryza sativa subs... 79 1e-13 tr|A2XIX6|A2XIX6_ORYSI Putative uncharacterized protein OS=Oryza... 79 1e-13 tr|B8AL68|B8AL68_ORYSI Putative uncharacterized protein OS=Oryza... 78 3e-13 tr|A4RYZ4|A4RYZ4_OSTLU Predicted protein OS=Ostreococcus lucimar... 70 1e-10 tr|Q9S7J2|Q9S7J2_PICAB Putative uncharacterized protein Sb08 (Fr... 69 1e-10 tr|B4UW66|B4UW66_ARAHY Putative uncharacterized protein (Fragmen... 68 4e-10 tr|Q7G149|Q7G149_PICMA Putative uncharacterized protein Sb08 (Fr... 67 5e-10 tr|O65094|O65094_PICMA Putative uncharacterized protein Sb08 (Fr... 67 5e-10 tr|B8AEE0|B8AEE0_ORYSI Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|A3ACD0|A3ACD0_ORYSJ Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|A3ACC7|A3ACC7_ORYSJ Putative uncharacterized protein OS=Oryza... 67 9e-10 tr|O65093|O65093_PICMA Putative uncharacterized protein Sb08 (Fr... 64 5e-09 tr|B5G142|B5G142_TAEGU Putative proteasome maturation protein OS... 63 1e-08 tr|B5G141|B5G141_TAEGU Putative proteasome maturation protein OS... 63 1e-08 tr|Q6DES1|Q6DES1_XENTR MGC89819 protein OS=Xenopus tropicalis GN... 62 2e-08
>tr|A9NKQ3|A9NKQ3_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 141
Score = 136 bits (342), Expect = 9e-31 Identities = 67/139 (48%), Positives = 91/139 (65%), Gaps = 6/139 (4%) Frame = +1
Query: 79 PFNPTHPHE------TLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSA 240 P + + PHE TLR GL K + + +HPV+++Q N++K R+ +R++L + YGSA Sbjct: 3 PVHQSLPHEIGGITDTLRFGLAGVKSDILISHPVQVIQENAQKQQREMKRNILAKTYGSA 62
Query: 241 VPLRMDIDRQILSRFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMH 420 PL+MDI++QILSRFQR TG LDEF FED+LNDP+ SE+ VP DMH Sbjct: 63 FPLKMDIEQQILSRFQRPPGELPSSMLGLESLTGSLDEFSFEDYLNDPRESETFVPADMH 122
Query: 421 LRMEAQLGLSKGPAARTFL 477 ME +LGLSKGP R+F+ Sbjct: 123 HGMEVRLGLSKGPVCRSFM 141
>tr|O65048|O65048_PICMA Putative uncharacterized protein Sb08 OS=Picea mariana GN=Sb08 PE=2 SV=1 Length = 141
Score = 135 bits (341), Expect = 1e-30 Identities = 67/139 (48%), Positives = 90/139 (64%), Gaps = 6/139 (4%) Frame = +1
Query: 79 PFNPTHPHE------TLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSA 240 P + PHE TLR GL K + + +HPV+++Q N++K R+ +R++L + YGSA Sbjct: 3 PVQQSLPHEIGGITDTLRFGLAGVKSDILISHPVQVIQENAQKQQREMKRNILAKTYGSA 62
Query: 241 VPLRMDIDRQILSRFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMH 420 PL+MDI++QILSRFQR TG LDEF FED+LNDP+ SE+ VP DMH Sbjct: 63 FPLKMDIEQQILSRFQRPPGELPSSMLGLESLTGSLDEFSFEDYLNDPRESETFVPADMH 122
Query: 421 LRMEAQLGLSKGPAARTFL 477 ME +LGLSKGP R+F+ Sbjct: 123 HGMEVRLGLSKGPVCRSFM 141
>tr|Q9FFV7|Q9FFV7_ARATH Gb|AAB95243.1 (Putative uncharacterized protein At5g38650) (Putative uncharacterized protein) OS=Arabidopsis thaliana GN=At5g38650 PE=2 SV=1 Length = 141
Score = 117 bits (293), Expect = 5e-25 Identities = 56/126 (44%), Positives = 81/126 (64%) Frame = +1
Query: 100 HETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQILS 279 ++ LR GL K + + +HP+E + ++ + +R ++ YG+A+PL+MD+DRQILS Sbjct: 16 NDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYGAALPLKMDLDRQILS 75
Query: 280 RFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKGP 459 RFQR TG LD FGFED+LNDP+ SE+L P+D H ME +LGLSKGP Sbjct: 76 RFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVDFHHGMEVRLGLSKGP 135
Query: 460 AARTFL 477 A+ +F+ Sbjct: 136 ASPSFM 141
>tr|Q9FYG8|Q9FYG8_ARATH F1N21.7 OS=Arabidopsis thaliana PE=4 SV=1 Length = 303
Score = 112 bits (280), Expect = 1e-23 Identities = 54/126 (42%), Positives = 79/126 (62%) Frame = +1
Query: 100 HETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQILS 279 ++ LR GL K + +HP+E + +K +R+++ AYG+A+PL+MD+DRQILS Sbjct: 16 NDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYGTALPLKMDMDRQILS 75
Query: 280 RFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKGP 459 RFQR TG +D+FGFED+LNDP+ SE+ P+D H ME +LG+SKGP Sbjct: 76 RFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVDFHHGMEVRLGISKGP 135
Query: 460 AARTFL 477 +F+ Sbjct: 136 IYPSFI 141
>tr|Q94B05|Q94B05_ARATH Putative uncharacterized protein F1N21.15 (At1g67250) (Putative uncharacterized protein) (Putative uncharacterized protein At1g67250/F1N21_7) OS=Arabidopsis thaliana GN=At1g67250/F1N21_7 PE=2 SV=1 Length = 141
Score = 112 bits (280), Expect = 1e-23 Identities = 54/126 (42%), Positives = 79/126 (62%) Frame = +1
Query: 100 HETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQILS 279 ++ LR GL K + +HP+E + +K +R+++ AYG+A+PL+MD+DRQILS Sbjct: 16 NDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYGTALPLKMDMDRQILS 75
Query: 280 RFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKGP 459 RFQR TG +D+FGFED+LNDP+ SE+ P+D H ME +LG+SKGP Sbjct: 76 RFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVDFHHGMEVRLGISKGP 135
Query: 460 AARTFL 477 +F+ Sbjct: 136 IYPSFM 141
>tr|A7PAL6|A7PAL6_VITVI Chromosome chr14 scaffold_9, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00038169001 PE=4 SV=1 Length = 141
Score = 104 bits (260), Expect = 3e-21 Identities = 53/126 (42%), Positives = 72/126 (57%) Frame = +1
Query: 100 HETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQILS 279 ++ LR GL K + V +HP+E + + +R +L YG+A PL+MD+D QILS Sbjct: 16 NDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRKILANTYGTAFPLKMDLDAQILS 75
Query: 280 RFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKGP 459 RFQR TG LD FGFED+L+DP SE+ P DMH ME + G+SKGP Sbjct: 76 RFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLSDPCDSETFRPADMHHGMEVRHGISKGP 135
Query: 460 AARTFL 477 +F+ Sbjct: 136 ICPSFI 141
>tr|A5B647|A5B647_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009153 PE=4 SV=1 Length = 141
Score = 103 bits (257), Expect = 7e-21 Identities = 53/126 (42%), Positives = 70/126 (55%) Frame = +1
Query: 100 HETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQILS 279 ++ LR GL K + V +HP+E + + +R +L YG+A PL+MD+D QILS Sbjct: 16 NDALRFGLQGVKSDIVGSHPLESAYQSQREIQEGMKRXILANTYGTAFPLKMDLDAQILS 75
Query: 280 RFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKGP 459 RFQR TG LD FGFED+L DP SE P DMH ME + G+SKGP Sbjct: 76 RFQRPPGAIPSSMLGLEALTGSLDNFGFEDYLXDPCDSEXFRPADMHHGMEVRXGISKGP 135
Query: 460 AARTFL 477 +F+ Sbjct: 136 ICPSFI 141
>tr|B4FLC7|B4FLC7_MAIZE Proteasome maturation factor UMP1 family protein OS=Zea mays PE=2 SV=1 Length = 140
Score = 98.2 bits (243), Expect = 3e-19 Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Frame = +1
Query: 100 HETLRHGLTS-FKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQIL 276 H+TLR GL + K + P HP++ + K ++ E YGSA+ +R D+D QIL Sbjct: 14 HDTLRFGLNAGVKADLAPPHPLQSSIQSEAKFWADKKKFGTEAIYGSALNIRKDLDAQIL 73
Query: 277 SRFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKG 456 SRFQR TG LD+FGFED+LN PQ SE DMH ME +LGLSKG Sbjct: 74 SRFQRPPGALPSSLLGYEALTGSLDDFGFEDYLNMPQDSEGFRQPDMHHGMEVRLGLSKG 133
Query: 457 PAARTF 474 P +F Sbjct: 134 PICPSF 139
>tr|B7FIK2|B7FIK2_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 142
Score = 97.8 bits (242), Expect = 4e-19 Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 1/135 (0%) Frame = +1
Query: 58 EETGTSLPFNPTHPH-ETLRHGLTSFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYG 234 EE ++P H + LR GL K + V AHP+E + +R YG Sbjct: 2 EEESKTIPHQIGGVHTDVLRFGLPGVKSDIVGAHPLESSLQSVRGVEEAMKRQCKVNLYG 61
Query: 235 SAVPLRMDIDRQILSRFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMD 414 +A P + ++DRQILSRFQR TG LD FGFED+LND + SE+ P+D Sbjct: 62 AAFPPKEELDRQILSRFQRPPGVIPSSMLGLETVTGTLDHFGFEDYLNDSRESETFRPLD 121
Query: 415 MHLRMEAQLGLSKGP 459 MH ME +LGLSKGP Sbjct: 122 MHHGMEVRLGLSKGP 136
>tr|Q69IK6|Q69IK6_ORYSJ Os02g0800100 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032L17.7 PE=2 SV=1 Length = 141
Score = 96.7 bits (239), Expect = 8e-19 Identities = 55/126 (43%), Positives = 68/126 (53%), Gaps = 1/126 (0%) Frame = +1
Query: 100 HETLRHGLT-SFKQEAVPAHPVEIVQSNSEKHHRQTQRSLLERAYGSAVPLRMDIDRQIL 276 H+ LR G+ S K + P HP++ K +R E YGSA +R D+D QIL Sbjct: 15 HDVLRFGVNDSVKGDLAPPHPLQASVHKDAKFWADKKRFGAEAIYGSAFNIRKDLDAQIL 74
Query: 277 SRFQRXXXXXXXXXXXXXXXTGELDEFGFEDFLNDPQISESLVPMDMHLRMEAQLGLSKG 456 S+FQR TG LD+FGFED+LN PQ SES DMH ME +LGLSKG Sbjct: 75 SKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNLPQDSESFRAPDMHHGMEVRLGLSKG 134
Query: 457 PAARTF 474 P +F Sbjct: 135 PVCPSF 140
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