DK956094 |
Clone id |
TST39A01NGRL0024_N12 |
Library |
TST39 |
Length |
430 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_N12. 5' end sequence. |
Accession |
DK956094 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL1828Contig1 |
Sequence |
CAATAATGGAGGAGTTGAGGAAGAGAGCTGATGCTGACAAAAATGACAAATCTGTGAAGG ATCTTGTTCTATTGCTGTTTGAGACTGCTTTGCTGACATCTGGATTCAGCTTGGATGATC CCAACACTTTTGGAAACAGAATTCATCGGATGCTGAAACTTGGACTCAGCATTGACGATG ATGCTGGTGTGTCTGCTGATGCGGATGATGACATGGATGCTGCTGGGAACGATGCTGAAC CTGAGGGAAGCAAGATGGAGGAGGTTGATTAAAACTTTTGTGCAGTGGGATTTAGCCTAC AGCCAAATTTTTGTAATTAATCTTTGCGGACTTAGACATGGTAATCTTGGGGAAATGTAC TGGTGTTTTTTAACAACGATATAATTGAAGCTCGTAGCTAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P36181 |
Definition |
sp|P36181|HSP80_SOLLC Heat shock cognate protein 80 OS=Solanum lycopersicum |
Align length |
89 |
Score (bit) |
91.7 |
E-value |
1.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8GT83 |
Definition |
tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium barbadense |
Align length |
89 |
Score (bit) |
95.9 |
E-value |
9.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956094|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_N12, 5' (399 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium... 96 9e-19 tr|B6EBD6|B6EBD6_SOYBN Heat shock protein 90-2 OS=Glycine max PE... 96 9e-19 tr|Q9M5X2|Q9M5X2_EUPES Heat-shock protein 80 (Fragment) OS=Eupho... 95 2e-18 tr|Q6UJX5|Q6UJX5_NICBE Molecular chaperone Hsp90-2 OS=Nicotiana ... 94 3e-18 tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1 OS=Glycine max PE... 94 3e-18 tr|A7R4C2|A7R4C2_VITVI Chromosome undetermined scaffold_648, who... 94 4e-18 tr|A5AHA8|A5AHA8_VITVI Putative uncharacterized protein OS=Vitis... 94 4e-18 tr|Q8H158|Q8H158_ARATH Putative heat shock protein 81-2 (HSP81-2... 93 6e-18 tr|Q6UJX4|Q6UJX4_SOLLC Molecular chaperone Hsp90-1 OS=Solanum ly... 93 6e-18 tr|Q922F6|Q922F6_MOUSE Putative uncharacterized protein (Fragmen... 93 7e-18 tr|Q6UJX6|Q6UJX6_NICBE Molecular chaperone Hsp90-1 OS=Nicotiana ... 93 7e-18 tr|Q6R0J1|Q6R0J1_TOBAC Heat shock protein 90 OS=Nicotiana tabacu... 93 7e-18 tr|Q14TB1|Q14TB1_TOBAC Heat shock protein 90 OS=Nicotiana tabacu... 93 7e-18 tr|A9SIS2|A9SIS2_PHYPA Predicted protein OS=Physcomitrella paten... 92 1e-17 tr|Q53Z32|Q53Z32_SOLLC Molecular chaperone Hsp90-2 OS=Solanum ly... 92 2e-17 tr|B1Q477|B1Q477_CAPCH Putative Hsp90-2 OS=Capsicum chinense PE=... 92 2e-17 tr|A9PGU4|A9PGU4_POPTR Putative uncharacterized protein OS=Popul... 92 2e-17 tr|Q8GRU8|Q8GRU8_ARATH Putative heat shock protein 90 OS=Arabido... 91 2e-17 tr|Q56WE0|Q56WE0_ARATH Heat shock protein 90 (Fragment) OS=Arabi... 91 2e-17 tr|Q0WLP0|Q0WLP0_ARATH HEAT SHOCK PROTEIN 81-2 (Fragment) OS=Ara... 91 2e-17 tr|A7Q9E0|A7Q9E0_VITVI Chromosome chr19 scaffold_66, whole genom... 91 2e-17 tr|A9TFM2|A9TFM2_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17 tr|A9TFL9|A9TFL9_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17 tr|A9NMS8|A9NMS8_PICSI Putative uncharacterized protein OS=Picea... 91 3e-17 tr|Q9ZRG0|Q9ZRG0_WHEAT Heat shock protein 80 OS=Triticum aestivu... 90 6e-17 tr|O03986|O03986_ARATH Heat shock protein OS=Arabidopsis thalian... 90 6e-17 tr|A9TQU1|A9TQU1_PHYPA Predicted protein OS=Physcomitrella paten... 90 6e-17 tr|A8WEL7|A8WEL7_9MAGN Heat shock protein 90 OS=Vitis pseudoreti... 90 6e-17 tr|A8IXR4|A8IXR4_BRACM Heat shock protein 81-4 OS=Brassica campe... 90 6e-17 tr|A9TLH3|A9TLH3_PHYPA Predicted protein OS=Physcomitrella paten... 89 1e-16
>tr|Q8GT83|Q8GT83_GOSBA Fiber protein Fb9 (Fragment) OS=Gossypium barbadense PE=2 SV=1 Length = 176
Score = 95.9 bits (237), Expect = 9e-19 Identities = 55/89 (61%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLDDPNTFGNRIHRMLKLGLSI Sbjct: 90 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSI--D 147
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 148 EDAGEAEADADMPPLEDADAEGSKMEEVD 176
>tr|B6EBD6|B6EBD6_SOYBN Heat shock protein 90-2 OS=Glycine max PE=2 SV=1 Length = 700
Score = 95.9 bits (237), Expect = 9e-19 Identities = 55/89 (61%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLDDPNTFGNRIHRMLKLGLSI Sbjct: 614 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSI--D 671
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 672 EDAGEADADMPPLEDADADAEGSKMEEVD 700
>tr|Q9M5X2|Q9M5X2_EUPES Heat-shock protein 80 (Fragment) OS=Euphorbia esula PE=2 SV=1 Length = 320
Score = 94.7 bits (234), Expect = 2e-18 Identities = 54/89 (60%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IM+ELRKRADADKNDKSVKD TSGFSLDDPNTFGNRIHRMLKLGLSI Sbjct: 234 IMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGNRIHRMLKLGLSI--D 291
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 292 EDAGEGDADMPALEEADADAEGSKMEEVD 320
>tr|Q6UJX5|Q6UJX5_NICBE Molecular chaperone Hsp90-2 OS=Nicotiana benthamiana PE=2 SV=1 Length = 699
Score = 94.4 bits (233), Expect = 3e-18 Identities = 54/89 (60%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRMLKLGLSI Sbjct: 613 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSI--D 670
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 671 EDCGDAEADMPPLEDPEADAEGSKMEEVD 699
>tr|B6EBD7|B6EBD7_SOYBN Heat shock protein 90-1 OS=Glycine max PE=2 SV=1 Length = 702
Score = 94.0 bits (232), Expect = 3e-18 Identities = 54/90 (60%), Positives = 56/90 (62%), Gaps = 1/90 (1%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSI-XX 179 IMEELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRMLKLGLSI Sbjct: 613 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDED 672
Query: 180 XXXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 673 AAEADADADMPPLEEEAEADAEGSKMEEVD 702
>tr|A7R4C2|A7R4C2_VITVI Chromosome undetermined scaffold_648, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00004280001 PE=4 SV=1 Length = 567
Score = 93.6 bits (231), Expect = 4e-18 Identities = 53/89 (59%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRM+KLGLSI Sbjct: 481 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMMKLGLSI--D 538
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 539 EDGPEADTDMPPLEEADADAEGSKMEEVD 567
>tr|A5AHA8|A5AHA8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029391 PE=4 SV=1 Length = 699
Score = 93.6 bits (231), Expect = 4e-18 Identities = 55/89 (61%), Positives = 58/89 (65%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRM+KLGLSI Sbjct: 613 IMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMMKLGLSI--D 670
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 671 EDGPEADXXMPPLEEADADAEGSKMEEVD 699
>tr|Q8H158|Q8H158_ARATH Putative heat shock protein 81-2 (HSP81-2) OS=Arabidopsis thaliana GN=At5g56030 PE=2 SV=1 Length = 699
Score = 93.2 bits (230), Expect = 6e-18 Identities = 53/89 (59%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IM+ELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRMLKLGLSI Sbjct: 613 IMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSI--D 670
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 671 DDDAVEADAEMPPLEDDADAEGSKMEEVD 699
>tr|Q6UJX4|Q6UJX4_SOLLC Molecular chaperone Hsp90-1 OS=Solanum lycopersicum PE=2 SV=1 Length = 699
Score = 93.2 bits (230), Expect = 6e-18 Identities = 53/89 (59%), Positives = 56/89 (62%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IM+ELRKRADADKNDKSVKD TSGFSLD+PNTFGNRIHRMLKLGLSI Sbjct: 613 IMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSI--D 670
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + EGSKMEEVD Sbjct: 671 EDGGDAEADMPALEDPEADAEGSKMEEVD 699
>tr|Q922F6|Q922F6_MOUSE Putative uncharacterized protein (Fragment) OS=Mus musculus PE=2 SV=1 Length = 491
Score = 92.8 bits (229), Expect = 7e-18 Identities = 54/89 (60%), Positives = 55/89 (61%) Frame = +3
Query: 3 IMEELRKRADADKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFGNRIHRMLKLGLSIXXX 182 IMEELRKRADADKNDKSVKD TSGFSLDDPNTFGNRIHRMLKLGLSI Sbjct: 406 IMEELRKRADADKNDKSVKDLVLLLHETALLTSGFSLDDPNTFGNRIHRMLKLGLSI--- 462
Query: 183 XXXXXXXXXXXXXXXXXXEPEGSKMEEVD 269 + E SKMEEVD Sbjct: 463 DDDAAGEVDVDMPALEEADAEESKMEEVD 491
|