DK956101 |
Clone id |
TST39A01NGRL0024_N19 |
Library |
TST39 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_N19. 5' end sequence. |
Accession |
DK956101 |
Tissue type |
prothallia with plantlets |
Developmental stage |
gametophytes with sporophytes |
Contig ID |
CL34Contig1 |
Sequence |
GTAACATTGGAAACATGGTTCCACCTTATACCGGGAACTCTTGCTCATCTGCTGCTTCTG CCATTGAGTATGCGGTGCTGCACTTGAAGGTGAAGCATCTTGTTGTCATTGGCCACAGCC GATGTGGTGCCATCAAAGCCTTGATGGGCATTGAAGAGGATGGGTCAAATAGGTTCAGCG AATTCATCGAAGACTGGATTCTGATTTCGAAAACTGCCTCTAAGAAGGTGAAGAGCTTGC ACCAATCTGCTGAATTTACAGAGCAGTGTACAAAGTGTGAGAAGGAGAATGTAAACAATG CGTTGTGGAACTGCCTTTCATACCCATTTGTTAGAGAAAAGATGTCTTCAGGGGAGTTGA CTCTTCATGGCGGTTACTATGATTTTGTGAACAATGCATTTGAGAGTTGGTCGGTAGATT TGGCATCAATGTCGAAGGTCGAAAAGGTGCATTAAGTGGGTACAGACTGTCTCTAGGATG GGAAGGGTAACTAACAAAGAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P46513 |
Definition |
sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis |
Align length |
139 |
Score (bit) |
133.0 |
E-value |
4.0e-31 |
Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956101|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_N19, 5' (503 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria... 133 4e-31 sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thalian... 130 3e-30 sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis P... 130 5e-30 sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=... 129 1e-29 sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2... 129 1e-29 sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicoti... 128 1e-29 sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sa... 128 1e-29 sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=... 128 2e-29 sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeu... 128 2e-29 sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabid... 128 2e-29 sp|P16016|CAHC_SPIOL Carbonic anhydrase, chloroplastic OS=Spinac... 127 2e-29 sp|O24855|CYNT_HELPY Carbonic anhydrase OS=Helicobacter pylori G... 64 5e-10 sp|Q9ZN54|CYNT_HELPJ Carbonic anhydrase OS=Helicobacter pylori J... 63 7e-10 sp|Q54735|CYNT_SYNY3 Carbonic anhydrase OS=Synechocystis sp. (st... 61 3e-09 sp|P27134|CYNT_SYNE7 Carbonic anhydrase OS=Synechococcus elongat... 58 2e-08 sp|P0ABE9|CYNT_ECOLI Carbonic anhydrase 1 OS=Escherichia coli (s... 53 9e-07 sp|P0ABF0|CYNT_ECO57 Carbonic anhydrase 1 OS=Escherichia coli O1... 53 9e-07 sp|Q9I262|CYNT_PSEAE Carbonic anhydrase OS=Pseudomonas aeruginos... 50 6e-06 sp|P45148|CAN_HAEIN Carbonic anhydrase 2 OS=Haemophilus influenz... 37 0.068 sp|O94255|CAN_SCHPO Carbonic anhydrase OS=Schizosaccharomyces po... 34 0.34 sp|Q9PQ79|SYI_UREPA Isoleucyl-tRNA synthetase OS=Ureaplasma parv... 32 1.7 sp|B2KIQ4|WDR76_RHIFE WD repeat-containing protein 76 OS=Rhinolo... 32 2.2 sp|Q5JRA6|MIA3_HUMAN Melanoma inhibitory activity protein 3 OS=H... 32 2.2 sp|Q3E9Z8|FB236_ARATH Putative F-box protein At4g17780 OS=Arabid... 30 6.4 sp|P53615|CAN_YEAST Carbonic anhydrase OS=Saccharomyces cerevisi... 30 8.3
>sp|P46513|CAH2_FLALI Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1 Length = 190
Score = 133 bits (335), Expect = 4e-31 Identities = 68/139 (48%), Positives = 88/139 (63%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 NI NMVPPY S A +AIEYA IGHS CG IK LM I +DG+ S+ Sbjct: 44 NIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPA-SD 102
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIE W+ + A KVK+ + EF + CTKCEKE VN +L N L+YPFVR+ + + +L+ Sbjct: 103 FIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLS 162
Query: 363 LHGGYYDFVNNAFESWSVD 419 L G +YDFVN AF+ W++D Sbjct: 163 LKGAHYDFVNGAFDLWNLD 181
>sp|P42737|CAH2_ARATH Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2 Length = 259
Score = 130 bits (327), Expect = 3e-30 Identities = 66/138 (47%), Positives = 84/138 (60%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 NI NMVPP+ + +AIEYA IGHS CG IK LM DG+N ++ Sbjct: 113 NIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TD 171
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ I A KV + +S+ F +QC +CE+E VN +L N L+YPFVRE + G L Sbjct: 172 FIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLA 231
Query: 363 LHGGYYDFVNNAFESWSV 416 L GGYYDFVN +FE W + Sbjct: 232 LKGGYYDFVNGSFELWEL 249
>sp|P46512|CAH1_FLALI Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1 Length = 330
Score = 130 bits (326), Expect = 5e-30 Identities = 62/144 (43%), Positives = 84/144 (58%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 N+ NMVPP+ S +A+EYA IGHSRCG IK LM ++G + ++ Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TD 242
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ + A KV + H +QC +CEKE VN +L N L+YPFVR+ + + L Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 302
Query: 363 LHGGYYDFVNNAFESWSVDLASMS 434 L GG+YDFVN FE W++D S Sbjct: 303 LKGGHYDFVNGTFELWALDFGLSS 326
>sp|P46281|CAHX_FLAPR Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1 Length = 329
Score = 129 bits (323), Expect = 1e-29 Identities = 62/144 (43%), Positives = 83/144 (57%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 N+ NMVPP+ S +A+EYA IGHSRCG IK LM ++G + ++ Sbjct: 183 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TD 241
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L Sbjct: 242 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 301
Query: 363 LHGGYYDFVNNAFESWSVDLASMS 434 L GG+YDFVN FE W++D S Sbjct: 302 LKGGHYDFVNGTFELWALDFGLSS 325
>sp|P46511|CAHX_FLABR Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1 Length = 330
Score = 129 bits (323), Expect = 1e-29 Identities = 62/144 (43%), Positives = 83/144 (57%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 N+ NMVPP+ S +A+EYA IGHSRCG IK LM ++G + ++ Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TD 242
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLA 302
Query: 363 LHGGYYDFVNNAFESWSVDLASMS 434 L GG+YDFVN FE W++D S Sbjct: 303 LKGGHYDFVNGTFELWALDFGLSS 326
>sp|P27141|CAHC_TOBAC Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Length = 321
Score = 128 bits (322), Expect = 1e-29 Identities = 67/139 (48%), Positives = 79/139 (56%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 NI NMVP Y S +AIEYA IGHS CG IK LM + DGS + Sbjct: 175 NIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSES-TA 233
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ I A KV+ H F +QCT CEKE VN +L N L+YPFVRE + L Sbjct: 234 FIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLA 293
Query: 363 LHGGYYDFVNNAFESWSVD 419 L GG+YDFVN FE W ++ Sbjct: 294 LKGGHYDFVNGGFELWGLE 312
>sp|P17067|CAHC_PEA Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1 Length = 328
Score = 128 bits (322), Expect = 1e-29 Identities = 65/144 (45%), Positives = 83/144 (57%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 N+ N+VPPY + +AIEYA IGHS CG IK L+ DG+ ++ Sbjct: 182 NVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYS-TD 240
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIE+W+ I A KVK+ H A F E CT CEKE VN +L N L+YPFVRE + + L Sbjct: 241 FIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLA 300
Query: 363 LHGGYYDFVNNAFESWSVDLASMS 434 L GGYYDFV +FE W ++ S Sbjct: 301 LKGGYYDFVKGSFELWGLEFGLSS 324
>sp|P46510|CAHX_FLABI Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2 Length = 330
Score = 128 bits (321), Expect = 2e-29 Identities = 62/144 (43%), Positives = 83/144 (57%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 N+ NMVPP+ S +A+EYA IGHSRCG IK LM ++G + ++ Sbjct: 184 NVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHS-TD 242
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ + A KV + H +QC CEKE VN +L N L+YPFVR+ + + L Sbjct: 243 FIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLA 302
Query: 363 LHGGYYDFVNNAFESWSVDLASMS 434 L GG+YDFVN FE W++D S Sbjct: 303 LKGGHYDFVNGTFELWALDFGLSS 326
>sp|P40880|CAHC_HORVU Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1 Length = 324
Score = 128 bits (321), Expect = 2e-29 Identities = 66/136 (48%), Positives = 86/136 (63%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 NI NMVP Y N + SAIEYA IGHSRCG IKAL+ ++ DG++ Sbjct: 188 NIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLK-DGADDSFH 246
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 F+EDW+ I A KKV++ S F +QCT EKE VN +L N L+YPFV+E +++G L Sbjct: 247 FVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEKEAVNVSLQNLLTYPFVKEGVTNGTLK 306
Query: 363 LHGGYYDFVNNAFESW 410 L GG+YDFV+ FE+W Sbjct: 307 LVGGHYDFVSGKFETW 322
>sp|P27140|CAHC_ARATH Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2 Length = 347
Score = 128 bits (321), Expect = 2e-29 Identities = 70/151 (46%), Positives = 87/151 (57%), Gaps = 2/151 (1%) Frame = +3
Query: 3 NIGNMVPPYTGNSCSSAASAIEYAXXXXXXXXXXXIGHSRCGAIKALMGIEEDGSNRFSE 182 NI NMVPP+ +AIEYA IGHS CG IK LM DG+N ++ Sbjct: 190 NIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNS-TD 248
Query: 183 FIEDWILISKTASKKVKSLHQSAEFTEQCTKCEKENVNNALWNCLSYPFVREKMSSGELT 362 FIEDW+ I A KV S + F +QC +CE+E VN +L N L+YPFVRE + G L Sbjct: 249 FIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLA 308
Query: 363 LHGGYYDFVNNAFESWSVD--LASMSKVEKV 449 L GGYYDFV AFE W ++ L+ S V+ V Sbjct: 309 LKGGYYDFVKGAFELWGLEFGLSETSSVKDV 339
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5NE21 |
Definition |
tr|Q5NE21|Q5NE21_SOLLC Carbonic anhydrase OS=Solanum lycopersicum |
Align length |
139 |
Score (bit) |
135.0 |
E-value |
1.0e-30 |
Report |
 |