| DK956102 |
| Clone id |
TST39A01NGRL0024_N20 |
| Library |
TST39 |
| Length |
590 |
| Definition |
Adiantum capillus-veneris mRNA. clone: TST39A01NGRL0024_N20. 5' end sequence. |
| Accession |
DK956102 |
| Tissue type |
prothallia with plantlets |
| Developmental stage |
gametophytes with sporophytes |
| Contig ID |
CL1608Contig1 |
| Sequence |
CCCACCCCCACACACACACAAACACGCCCACGCGCAGCTCGCCATAGCCAAGTTGTCTCC AAGCTCGCACTCACATACCTGCAGACAAGGAGAAAATCCCCACCTCGGTGCCCTCGAAAC CTCTGGAGGCGGATCTTCCCTGGATCTAGCTGTGAGAAACCGTCAATCAGAAACAATTTT CTGCAATTATTTATTCCCGGCTCGGCTACAAGGAGCAGTTGATTCCCCTGCATTATAAAA CGGGCTGGCTTAGCTAAGCTCAGACATGGAGCCTGCAGCGTTCTCCGTCAACAGGAGAGG AGAGCATCTTGTCAGATACCGCCCAAAGAGGAGCCCTCATCAGATCGCAAGTTGTGTGGA AGAGGTGACTGGAAGCAGGCACATTGATGCAGACTCTAATGGCAGCTCTGATACAGTATC AAACCTTCATCACTTCCTACAGCACACAACCCCTCGGGTTCCATCTCAATCTCTTTCAAA GAGTCGTCTCCGAGGTCTGTCTGCTCAGGGTTCGATGGATTGTGAGAAAAATTTCTTCTC TCTCAATGATTTATGGGACAGTTTCGATGAGTGGAGTGCATATGGGGCAG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q6AI39 |
| Definition |
sp|Q6AI39|K0240_HUMAN Uncharacterized protein KIAA0240 OS=Homo sapiens |
| Align length |
65 |
| Score (bit) |
34.3 |
| E-value |
0.48 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9RPR0 |
| Definition |
tr|A9RPR0|A9RPR0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
97 |
| Score (bit) |
70.5 |
| E-value |
7.0e-11 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= DK956102|Adiantum capillus-veneris mRNA, clone: TST39A01NGRL0024_N20, 5' (590 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RPR0|A9RPR0_PHYPA Predicted protein OS=Physcomitrella paten... 70 7e-11 tr|A9RSK0|A9RSK0_PHYPA Predicted protein OS=Physcomitrella paten... 69 2e-10 tr|A7PGX7|A7PGX7_VITVI Chromosome chr17 scaffold_16, whole genom... 64 6e-09 tr|Q6YSZ2|Q6YSZ2_ORYSJ Os07g0246600 protein OS=Oryza sativa subs... 62 2e-08 tr|Q9ZT70|Q9ZT70_ARATH Putative uncharacterized protein AT4g0342... 61 5e-08 tr|Q8S9K9|Q8S9K9_ARATH AT4g03420/F9H3_4 OS=Arabidopsis thaliana ... 61 5e-08 tr|A9TPL8|A9TPL8_PHYPA Predicted protein OS=Physcomitrella paten... 60 7e-08 tr|A9RZ13|A9RZ13_PHYPA Predicted protein OS=Physcomitrella paten... 60 1e-07 tr|Q9ZU41|Q9ZU41_ARATH Predicted by genscan and genefinder (Puta... 59 3e-07 tr|Q3E6X2|Q3E6X2_ARATH Uncharacterized protein At2g01260.2 OS=Ar... 59 3e-07 tr|Q2V4B5|Q2V4B5_ARATH Uncharacterized protein At2g01260.3 OS=Ar... 59 3e-07 tr|Q9M0J2|Q9M0J2_ARATH Putative uncharacterized protein AT4g2815... 57 8e-07 tr|Q8GUN3|Q8GUN3_ARATH Putative uncharacterized protein At4g2815... 57 8e-07 tr|Q8L9D1|Q8L9D1_ARATH Putative uncharacterized protein OS=Arabi... 57 1e-06 tr|Q9LR63|Q9LR63_ARATH F21B7.22 OS=Arabidopsis thaliana PE=4 SV=1 56 1e-06 tr|Q9FJ18|Q9FJ18_ARATH Gb|AAF31026.1 OS=Arabidopsis thaliana PE=... 56 1e-06 tr|Q8VZK6|Q8VZK6_ARATH Putative uncharacterized protein At5g4922... 56 1e-06 tr|Q8RY13|Q8RY13_ARATH At1g03610/F21B7_13 OS=Arabidopsis thalian... 56 1e-06 tr|Q8LF98|Q8LF98_ARATH Putative uncharacterized protein OS=Arabi... 56 1e-06 tr|A9P9W8|A9P9W8_POPTR Putative uncharacterized protein OS=Popul... 55 2e-06 tr|B4FEX2|B4FEX2_MAIZE Putative uncharacterized protein OS=Zea m... 55 3e-06 tr|A7Q9Q2|A7Q9Q2_VITVI Chromosome chr5 scaffold_67, whole genome... 55 3e-06 tr|A7Q8K6|A7Q8K6_VITVI Chromosome chr5 scaffold_64, whole genome... 54 5e-06 tr|Q850Z6|Q850Z6_ORYSJ Putative uncharacterized protein OSJNBb00... 54 9e-06 tr|Q7Y149|Q7Y149_ORYSJ Putative uncharacterized protein OSJNBa00... 54 9e-06 tr|Q10B37|Q10B37_ORYSJ Os03g0831300 protein OS=Oryza sativa subs... 54 9e-06 tr|B8AMR1|B8AMR1_ORYSI Putative uncharacterized protein OS=Oryza... 54 9e-06 tr|A7P3D3|A7P3D3_VITVI Chromosome chr1 scaffold_5, whole genome ... 54 9e-06 tr|A5BKM4|A5BKM4_VITVI Putative uncharacterized protein OS=Vitis... 54 9e-06 tr|Q3E9V1|Q3E9V1_ARATH Uncharacterized protein At4g28150.2 (Puta... 53 1e-05
>tr|A9RPR0|A9RPR0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117738 PE=4 SV=1 Length = 400
Score = 70.5 bits (171), Expect = 7e-11 Identities = 44/97 (45%), Positives = 56/97 (57%), Gaps = 9/97 (9%) Frame = +2
Query: 326 KRSPHQIASC-------VEEVTGSRHID--ADSNGSSDTVSNLHHFLQHTTPRVPSQSLS 478 KR+ + A C +VTG ++ A S+G S +SNL FL+ TTP V +L Sbjct: 56 KRNGQRAAKCSNHGVGGTPDVTGRINVPSVACSSGRSFPLSNLDRFLEETTPCVKVLTLP 115
Query: 479 KSRLRGLSAQGSMDCEKNFFSLNDLWDSFDEWSAYGA 589 KSRLR S + E +F+L DLWDSFDEWSAYGA Sbjct: 116 KSRLRDPSNRWFNPEETPYFNLGDLWDSFDEWSAYGA 152
>tr|A9RSK0|A9RSK0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_177744 PE=4 SV=1 Length = 341
Score = 68.9 bits (167), Expect = 2e-10 Identities = 35/66 (53%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Frame = +2
Query: 395 SNGSSDTVSNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCEKN-FFSLNDLWDSFDE 571 S+G SN+ FL+ TTPRV +Q+L KS +R S + ++ EK +F+L DLWDSFDE Sbjct: 13 SSGHFSCPSNIDRFLEVTTPRVKTQNLPKSYVRDSSQKRCLNPEKTAYFNLRDLWDSFDE 72
Query: 572 WSAYGA 589 WSAYGA Sbjct: 73 WSAYGA 78
>tr|A7PGX7|A7PGX7_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017727001 PE=4 SV=1 Length = 370
Score = 63.9 bits (154), Expect = 6e-09 Identities = 34/66 (51%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = +2
Query: 395 SNGSSDTVSNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCE-KNFFSLNDLWDSFDE 571 S+ S SNL FL+ TTP VP+Q SK+ +RGL + D E +++F+L DLW+SF E Sbjct: 72 SSEPSTAPSNLDRFLESTTPSVPAQYFSKTTMRGLR---TCDIEFQHYFTLGDLWESFME 128
Query: 572 WSAYGA 589 WSAYGA Sbjct: 129 WSAYGA 134
>tr|Q6YSZ2|Q6YSZ2_ORYSJ Os07g0246600 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0003K21.26 PE=4 SV=1 Length = 455
Score = 62.0 bits (149), Expect = 2e-08 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 1/102 (0%) Frame = +2
Query: 287 VNRRGEHLVRYRPKRSPHQIASCVEEVTGSRHIDADSNGSSDTVS-NLHHFLQHTTPRVP 463 V RR + +V+ +P SP ++ V+ + + + + + NL FL TTP VP Sbjct: 105 VERRVDAVVQSKPSVSPLPSSADVKRPPAAESAPEPARAAEEEAAGNLERFLSSTTPSVP 164
Query: 464 SQSLSKSRLRGLSAQGSMDCEKNFFSLNDLWDSFDEWSAYGA 589 Q L K+ +RG + +M+ +F L DLW++F+EWS YGA Sbjct: 165 VQYLPKTSMRGWRSGDAMNSSP-YFCLGDLWEAFNEWSFYGA 205
>tr|Q9ZT70|Q9ZT70_ARATH Putative uncharacterized protein AT4g03420 OS=Arabidopsis thaliana GN=F9H3.4 PE=4 SV=1 Length = 358
Score = 60.8 bits (146), Expect = 5e-08 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +2
Query: 419 SNLHHFLQHTTPRVPSQSLSKSRLRGLSA-QGSMDCEK-NFFSLNDLWDSFDEWSAYGA 589 SNL FL TTP VP QSLSK+ +R L+ + +K FF L+DLWD +DEWSAYGA Sbjct: 7 SNLDRFLHCTTPVVPPQSLSKAEIRSLNRIWHPWERQKVEFFRLSDLWDCYDEWSAYGA 65
>tr|Q8S9K9|Q8S9K9_ARATH AT4g03420/F9H3_4 OS=Arabidopsis thaliana GN=At4g03420 PE=2 SV=1 Length = 310
Score = 60.8 bits (146), Expect = 5e-08 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 2/59 (3%) Frame = +2
Query: 419 SNLHHFLQHTTPRVPSQSLSKSRLRGLSA-QGSMDCEK-NFFSLNDLWDSFDEWSAYGA 589 SNL FL TTP VP QSLSK+ +R L+ + +K FF L+DLWD +DEWSAYGA Sbjct: 7 SNLDRFLHCTTPVVPPQSLSKAEIRSLNRIWHPWERQKVEFFRLSDLWDCYDEWSAYGA 65
>tr|A9TPL8|A9TPL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148691 PE=4 SV=1 Length = 337
Score = 60.5 bits (145), Expect = 7e-08 Identities = 31/66 (46%), Positives = 43/66 (65%) Frame = +2
Query: 389 ADSNGSSDTVSNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCEKNFFSLNDLWDSFD 568 A S+G S + SNL FL+ T+PRV +Q+L K + + + + +F+L DLWDSFD Sbjct: 24 ACSSGQSSSQSNLDRFLEETSPRVKTQTLPKVVISRAMRRCNPEVTP-YFNLRDLWDSFD 82
Query: 569 EWSAYG 586 EWSAYG Sbjct: 83 EWSAYG 88
>tr|A9RZ13|A9RZ13_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_72334 PE=4 SV=1 Length = 276
Score = 59.7 bits (143), Expect = 1e-07 Identities = 34/67 (50%), Positives = 41/67 (61%) Frame = +2
Query: 389 ADSNGSSDTVSNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCEKNFFSLNDLWDSFD 568 A S+G S SNL FL+ TTPRV +Q L K + + E +F+L DLWDSFD Sbjct: 7 ASSSGRSYAPSNLDRFLEVTTPRVRTQYLPK--------RCANPEETLYFNLGDLWDSFD 58
Query: 569 EWSAYGA 589 EWSAYGA Sbjct: 59 EWSAYGA 65
>tr|Q9ZU41|Q9ZU41_ARATH Predicted by genscan and genefinder (Putative uncharacterized protein At2g01260) (At2g01260) OS=Arabidopsis thaliana GN=At2g01260 PE=2 SV=2 Length = 369
Score = 58.5 bits (140), Expect = 3e-07 Identities = 29/56 (51%), Positives = 35/56 (62%) Frame = +2
Query: 419 SNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCEKNFFSLNDLWDSFDEWSAYG 586 SNL FL+ TP VP+Q LSK+ LR A + +F L D+WDSF EWSAYG Sbjct: 64 SNLDRFLESVTPSVPAQFLSKTLLRERRADDDYNKLVPYFVLGDIWDSFAEWSAYG 119
>tr|Q3E6X2|Q3E6X2_ARATH Uncharacterized protein At2g01260.2 OS=Arabidopsis thaliana GN=At2g01260 PE=4 SV=1 Length = 324
Score = 58.5 bits (140), Expect = 3e-07 Identities = 29/56 (51%), Positives = 35/56 (62%) Frame = +2
Query: 419 SNLHHFLQHTTPRVPSQSLSKSRLRGLSAQGSMDCEKNFFSLNDLWDSFDEWSAYG 586 SNL FL+ TP VP+Q LSK+ LR A + +F L D+WDSF EWSAYG Sbjct: 64 SNLDRFLESVTPSVPAQFLSKTLLRERRADDDYNKLVPYFVLGDIWDSFAEWSAYG 119
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